Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8h18
         (689 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-7|CAJ14158.1|  284|Anopheles gambiae signal sequence re...   183   5e-48
AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A prot...    24   5.2  
CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    23   6.9  

>CR954257-7|CAJ14158.1|  284|Anopheles gambiae signal sequence
           receptor protein.
          Length = 284

 Score =  183 bits (445), Expect = 5e-48
 Identities = 94/188 (50%), Positives = 120/188 (63%), Gaps = 3/188 (1%)
 Frame = +1

Query: 130 KLIYFTFLIVPAALLCLGSGN--ILARAXXXXXXXXXXXXXXXNQVVGDDALVDDDESVV 303
           K      L +PA LL + +G+      A                 VV D+   +DD    
Sbjct: 3   KFFVLLLLALPAVLLTVNTGSSPFAFAAEDELDEELVDVETEDAAVVADETEPEDDLETT 62

Query: 304 KSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSV-DYVVESMEASFRYPM 480
           KS  D DT +LFT+P+ + G    ++ AGYPVEF VGF NKG   D+VVES+EASFRY M
Sbjct: 63  KSP-DADTYLLFTRPLHASGS-QLELPAGYPVEFLVGFTNKGQFEDFVVESVEASFRYAM 120

Query: 481 DYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPFGLNVQLNYRDASGNAYQEA 660
           D++Y+IQNF+A+PYNREVKP  EAT AYSF+P E+FAGRPFGLN+ LNYRD  GN + EA
Sbjct: 121 DFSYFIQNFSAVPYNREVKPGHEATVAYSFLPTESFAGRPFGLNIALNYRDGRGNQFSEA 180

Query: 661 VYNQTLNI 684
           V+N+T+ I
Sbjct: 181 VFNETVQI 188


>AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 487 CSPLDTGKMPPWILLHS 437
           C P D  K PP +L HS
Sbjct: 21  CPPQDDPKQPPVLLAHS 37


>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 13/43 (30%), Positives = 16/43 (37%)
 Frame = +1

Query: 475 PMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPF 603
           P+    Y+ NF       E+ P Q  T    FI    F   PF
Sbjct: 291 PLSSNDYVDNFNIFTEFGELTPAQVLTLFNEFINWSEFHQSPF 333


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 703,054
Number of Sequences: 2352
Number of extensions: 13689
Number of successful extensions: 35
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)