Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8h14
(737 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41418 Cluster: Late expression factor 2; n=18; Nucleop... 228 9e-59
UniRef50_P41420 Cluster: Uncharacterized 12.4 kDa protein in CTL... 217 2e-55
UniRef50_A1YRI8 Cluster: Late expression factor-2; n=2; unclassi... 197 2e-49
UniRef50_Q4KSU5 Cluster: LEF-2; n=4; Nucleopolyhedrovirus|Rep: L... 81 3e-14
UniRef50_Q91GP2 Cluster: Putative uncharacterized protein; n=2; ... 76 1e-12
UniRef50_Q65371 Cluster: Uncharacterized 8.6 kDa protein; n=4; N... 74 4e-12
UniRef50_Q0N3Z3 Cluster: LEF-2; n=4; Nucleopolyhedrovirus|Rep: L... 69 9e-11
UniRef50_Q80LJ6 Cluster: Late expression factor 2; n=1; Adoxophy... 66 1e-09
UniRef50_Q2NP52 Cluster: ORF146 peptide; n=1; Hyphantria cunea n... 65 1e-09
UniRef50_Q91BU4 Cluster: Lef2; n=5; Nucleopolyhedrovirus|Rep: Le... 62 1e-08
UniRef50_A0EZ06 Cluster: Late expression factor 2; n=1; Ecotropi... 58 3e-07
UniRef50_Q8JMD9 Cluster: DNA replication and late expression fac... 54 4e-06
UniRef50_Q91BB9 Cluster: Late expression factor 2; n=1; Spodopte... 53 8e-06
UniRef50_P36869 Cluster: Late expression factor 2; n=1; Lymantri... 51 3e-05
UniRef50_Q0IKY2 Cluster: Lef-2; n=1; Leucania separata nuclear p... 45 0.002
UniRef50_UPI0000D56EBB Cluster: PREDICTED: similar to CG8378-PA;... 36 1.4
UniRef50_UPI00015B4F88 Cluster: PREDICTED: similar to conserved ... 34 4.2
UniRef50_A0CKZ6 Cluster: Chromosome undetermined scaffold_20, wh... 33 5.5
UniRef50_Q55A63 Cluster: Putative uncharacterized protein; n=2; ... 33 7.3
UniRef50_Q54V20 Cluster: Putative uncharacterized protein; n=1; ... 33 7.3
UniRef50_Q7R484 Cluster: GLP_480_88195_92982; n=1; Giardia lambl... 33 9.7
>UniRef50_P41418 Cluster: Late expression factor 2; n=18;
Nucleopolyhedrovirus|Rep: Late expression factor 2 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 210
Score = 228 bits (558), Expect = 9e-59
Identities = 107/128 (83%), Positives = 111/128 (86%)
Frame = +2
Query: 353 MADAPYNVWSPLISASCLDKKATYLIDPDDFIDKLTLTPYTVFYNGGVLVKISGLRLYML 532
MA+A YNVWSPLI ASCLDKKATYLIDPDDFIDKLTLTPYTVFYNGGVLVKISGLRLYML
Sbjct: 1 MANASYNVWSPLIRASCLDKKATYLIDPDDFIDKLTLTPYTVFYNGGVLVKISGLRLYML 60
Query: 533 LTAPPTINAIXXXXXXXXXXXXICMKECVEGKNNVVDMLNSKINMPPCIQKILGDLKKNN 712
LTAPPTIN I ICMKECVEGK NVVDMLN+KINMPPCI+KIL DLK+NN
Sbjct: 61 LTAPPTINEIKNSNFKKRSKRNICMKECVEGKKNVVDMLNNKINMPPCIKKILNDLKENN 120
Query: 713 VPRGGMYR 736
VPRGGMYR
Sbjct: 121 VPRGGMYR 128
>UniRef50_P41420 Cluster: Uncharacterized 12.4 kDa protein in
CTL-LEF2 intergenic region; n=7;
Nucleopolyhedrovirus|Rep: Uncharacterized 12.4 kDa
protein in CTL-LEF2 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 109
Score = 217 bits (531), Expect = 2e-55
Identities = 101/109 (92%), Positives = 104/109 (95%)
Frame = +1
Query: 43 MYSTSKINNARVVASQHDYDRDQIKRELNSLRRNVHDMCTRSGTSFDCNKFLRSDDMTPV 222
MY TS+INNA VVASQHDYDRDQIKRELNSLRRNVHD+CTRSGTSFDCNKFLRSDDMTPV
Sbjct: 1 MYRTSRINNAPVVASQHDYDRDQIKRELNSLRRNVHDLCTRSGTSFDCNKFLRSDDMTPV 60
Query: 223 VTTITPKRTADYKITEYVSDVKTIKPSNRPLVESGPLVQEAAKYGRCTV 369
VTTITPKRTADYKITEYV DVKTIKPSNRPLVESGPLV+EAAKYG C V
Sbjct: 61 VTTITPKRTADYKITEYVGDVKTIKPSNRPLVESGPLVREAAKYGECIV 109
>UniRef50_A1YRI8 Cluster: Late expression factor-2; n=2;
unclassified Nucleopolyhedrovirus|Rep: Late expression
factor-2 - Maruca vitrata MNPV
Length = 210
Score = 197 bits (481), Expect = 2e-49
Identities = 97/130 (74%), Positives = 104/130 (80%)
Frame = +2
Query: 347 RNMADAPYNVWSPLISASCLDKKATYLIDPDDFIDKLTLTPYTVFYNGGVLVKISGLRLY 526
+NMA A Y+VWSPLI+ASCLDKKATYLIDPDDFIDKLTLTPYTVFYNGGVLVKISGLRL+
Sbjct: 3 KNMATASYSVWSPLITASCLDKKATYLIDPDDFIDKLTLTPYTVFYNGGVLVKISGLRLF 62
Query: 527 MLLTAPPTINAIXXXXXXXXXXXXICMKECVEGKNNVVDMLNSKINMPPCIQKILGDLKK 706
MLLTA P N I ICMKEC NNVVDMLNSKI+ PPCI+KIL DLK
Sbjct: 63 MLLTAAPIENEIKNYNFKKRSKKNICMKEC----NNVVDMLNSKIDPPPCIRKILRDLKD 118
Query: 707 NNVPRGGMYR 736
+N PRGGMYR
Sbjct: 119 SNEPRGGMYR 128
>UniRef50_Q4KSU5 Cluster: LEF-2; n=4; Nucleopolyhedrovirus|Rep:
LEF-2 - Chrysodeixis chalcites nucleopolyhedrovirus
Length = 226
Score = 81.0 bits (191), Expect = 3e-14
Identities = 49/128 (38%), Positives = 68/128 (53%), Gaps = 7/128 (5%)
Frame = +2
Query: 374 VWSPLIS-ASCLDKKATYLIDPDDFIDKLTLTPYTVFYNGGVLVKISGLRLYMLLTAPPT 550
+W+PL+S +DK A Y I DDF + +TPYTVF N G +KISGLRLY LL
Sbjct: 19 LWTPLLSNLDDIDKNADYRILIDDF--DIDITPYTVFENDGATIKISGLRLYYLLKNKRL 76
Query: 551 INA-----IXXXXXXXXXXXXICMKECVEG-KNNVVDMLNSKINMPPCIQKILGDLKKNN 712
+C + ++G KN+VV ++ SK+ +PPCIQ +L D+
Sbjct: 77 YEESMETQCSSNKTFKKSLKKVCFTKAIQGGKNSVVAVIKSKLRLPPCIQSLLSDIDVR- 135
Query: 713 VPRGGMYR 736
PRG +R
Sbjct: 136 -PRGNRFR 142
>UniRef50_Q91GP2 Cluster: Putative uncharacterized protein; n=2;
Nucleopolyhedrovirus|Rep: Putative uncharacterized
protein - Epiphyas postvittana nucleopolyhedrovirus
(EppoMNPV)
Length = 117
Score = 75.8 bits (178), Expect = 1e-12
Identities = 32/66 (48%), Positives = 45/66 (68%)
Frame = +1
Query: 58 KINNARVVASQHDYDRDQIKRELNSLRRNVHDMCTRSGTSFDCNKFLRSDDMTPVVTTIT 237
+INNA V+ + HDYDR+Q+KR++NSLR +VH++C RS T FDCN+ L S T T +
Sbjct: 44 RINNAPVMVAGHDYDREQLKRDINSLRHSVHELCKRSTTGFDCNRLLESSTDTAKPTVVI 103
Query: 238 PKRTAD 255
A+
Sbjct: 104 KTTAAE 109
>UniRef50_Q65371 Cluster: Uncharacterized 8.6 kDa protein; n=4;
Nucleopolyhedrovirus|Rep: Uncharacterized 8.6 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 77
Score = 73.7 bits (173), Expect = 4e-12
Identities = 29/44 (65%), Positives = 37/44 (84%)
Frame = +1
Query: 94 DYDRDQIKRELNSLRRNVHDMCTRSGTSFDCNKFLRSDDMTPVV 225
DYDR+Q++RELNSLRR+VH++CTRS T FDCN+FL + D P V
Sbjct: 15 DYDREQLRRELNSLRRSVHELCTRSATGFDCNRFLEAGDRAPAV 58
>UniRef50_Q0N3Z3 Cluster: LEF-2; n=4; Nucleopolyhedrovirus|Rep:
LEF-2 - Clanis bilineata nucleopolyhedrosis virus
Length = 220
Score = 69.3 bits (162), Expect = 9e-11
Identities = 44/128 (34%), Positives = 65/128 (50%), Gaps = 8/128 (6%)
Frame = +2
Query: 374 VWSPLISASCLDKKATYLIDPDDFIDKLTLTPYTVFYNGGVLVKISGLRLYMLLT----A 541
VW+P I + + K A YL++ +DF L L PYTVF GG+ V++SGLRLY LL
Sbjct: 15 VWNPSIDKNNVYKNAEYLVNFEDF--DLELNPYTVFDQGGICVRVSGLRLYYLLNNNMLN 72
Query: 542 PPTINAIXXXXXXXXXXXXICMKE-C---VEGKNNVVDMLNSKINMPPCIQKILGDLKKN 709
T+ A+ K C V ++++ +++ K+ MPPC+ +L L
Sbjct: 73 KATLEAVATGSGGAQKKFKRSNKNVCFGSVRTRSDIAELIRGKLKMPPCMSTLLNQLLMR 132
Query: 710 NVPRGGMY 733
PRG Y
Sbjct: 133 --PRGDRY 138
>UniRef50_Q80LJ6 Cluster: Late expression factor 2; n=1; Adoxophyes
honmai NPV|Rep: Late expression factor 2 - Adoxophyes
honmai nucleopolyhedrovirus
Length = 211
Score = 65.7 bits (153), Expect = 1e-09
Identities = 43/125 (34%), Positives = 62/125 (49%), Gaps = 6/125 (4%)
Frame = +2
Query: 377 WSPLISASCLDKKATYLIDPDDFIDKLTLTPYTVFYN-GGVLVKISGLRLYMLLTAPPTI 553
W+P I S ++K A Y + +DF D + ++PYTVF+ G + +K+SG RLY +L
Sbjct: 9 WNPSIKPSEINKSALYTVSLEDFED-VEVSPYTVFFPPGSMTIKMSGARLYYMLNKKAEQ 67
Query: 554 N-----AIXXXXXXXXXXXXICMKECVEGKNNVVDMLNSKINMPPCIQKILGDLKKNNVP 718
N +C K V K V D+L++ I MP C+ I L+ N P
Sbjct: 68 NHKKTLLNPNKKPLRKSLKNVCFKSSVR-KQQVSDLLSASIKMPKCMLTIFNLLQAN--P 124
Query: 719 RGGMY 733
RGG Y
Sbjct: 125 RGGQY 129
>UniRef50_Q2NP52 Cluster: ORF146 peptide; n=1; Hyphantria cunea
nucleopolyhedrovirus|Rep: ORF146 peptide - Hyphantria
cunea nuclear polyhedrosis virus (HcNPV)
Length = 88
Score = 65.3 bits (152), Expect = 1e-09
Identities = 30/49 (61%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Frame = +1
Query: 67 NARVVASQHDYDRDQIKRELNSLRRNVHDMCTRSGTS-FDCNKFLRSDD 210
NA V + DYD++Q++R+LNSLRRNVH++CTRS T+ FDCN+FL S D
Sbjct: 11 NAAAVVTV-DYDQNQLRRDLNSLRRNVHELCTRSATTGFDCNRFLDSTD 58
>UniRef50_Q91BU4 Cluster: Lef2; n=5; Nucleopolyhedrovirus|Rep: Lef2
- Helicoverpa armigera NPV
Length = 242
Score = 62.5 bits (145), Expect = 1e-08
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 7/128 (5%)
Frame = +2
Query: 374 VWSPLISASCLDKKATYLIDPDDFIDKLTLTPYTVFYNGGVLVKISGLRLYMLL------ 535
+W+P I S +DKKA YL+ +DF +L L+PYT F G+LV++ G +LY LL
Sbjct: 39 LWNPSICKSKIDKKAVYLVRFEDF--ELNLSPYTQFEQNGLLVRVYGTQLYHLLDNKTNN 96
Query: 536 -TAPPTINAIXXXXXXXXXXXXICMKECVEGKNNVVDMLNSKINMPPCIQKILGDLKKNN 712
T +C + ++++ L + +P CI+ IL D+
Sbjct: 97 ATTVYDRKPAIAKNGMHKSLRNVCFVNTQYKRQHIINTLRKALKLPACIELILNDILVR- 155
Query: 713 VPRGGMYR 736
PR G +R
Sbjct: 156 -PRNGRFR 162
>UniRef50_A0EZ06 Cluster: Late expression factor 2; n=1; Ecotropis
obliqua NPV|Rep: Late expression factor 2 - Ecotropis
obliqua NPV
Length = 211
Score = 57.6 bits (133), Expect = 3e-07
Identities = 38/114 (33%), Positives = 54/114 (47%), Gaps = 8/114 (7%)
Frame = +2
Query: 374 VWSPLISASCLDKKATYLIDPDDFIDKLTLTPYTVFYNGGVLVKISGLRLYMLLT----A 541
VW+P ++ S +DK Y I +DF + L+ +T F G+ + +SGLRLY L+ A
Sbjct: 6 VWNPSVTQSQIDKSKMYKISIEDF--DIKLSSHTQFEENGLCILVSGLRLYYLIENKNLA 63
Query: 542 PPTINAIXXXXXXXXXXXXICMKECVE----GKNNVVDMLNSKINMPPCIQKIL 691
N I C C + K+ VV +L KI MPPC+ IL
Sbjct: 64 STQFNGINTDCVKAKFKKKSCKNVCFQKLSQDKDAVVRLLLLKIKMPPCMAAIL 117
>UniRef50_Q8JMD9 Cluster: DNA replication and late expression factor
LEF-2; n=2; Nucleopolyhedrovirus|Rep: DNA replication
and late expression factor LEF-2 - Mamestra configurata
NPV-B
Length = 215
Score = 54.0 bits (124), Expect = 4e-06
Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 8/128 (6%)
Frame = +2
Query: 377 WSPL-ISASCLDKKATYLIDPDDFIDKLTLTPYTVFYNGGVLVKISGLRLYMLLTAPP-- 547
W+P I+ +DK + Y + D ID + +T T F + G+ V++SGLRLY L+ P
Sbjct: 10 WTPRNINIDTIDKTSDYTVSLAD-ID-INVTALTPFVDNGLRVRVSGLRLYYLMKNKPDI 67
Query: 548 --TINAIXXXXXXXXXXXXICMKE-CVEG--KNNVVDMLNSKINMPPCIQKILGDLKKNN 712
T A MK C +G ++ +V +LN K+ MP C+ + + D
Sbjct: 68 ADTAGATPKRKNAAATLKQKSMKNVCFKGFERDKIVKVLNQKLRMPECMVRFMNDFLLR- 126
Query: 713 VPRGGMYR 736
PRG +R
Sbjct: 127 -PRGDRFR 133
>UniRef50_Q91BB9 Cluster: Late expression factor 2; n=1; Spodoptera
litura NPV|Rep: Late expression factor 2 - Spodoptera
litura multicapsid nucleopolyhedrovirus (SpltMNPV)
Length = 210
Score = 52.8 bits (121), Expect = 8e-06
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 6/121 (4%)
Frame = +2
Query: 359 DAPYNVWSPLISASCLDKKATYLIDPDDFIDKLTLTPYTVFYNGGVLVKISGLRLYMLLT 538
D + +W+P S LD+ YL+ DDF ++PYTVF G+ V +SG RL L
Sbjct: 6 DENFVIWNP--SIEILDRNVQYLVRVDDF--DFDVSPYTVFAKNGMYVIMSGNRLKSLFN 61
Query: 539 APPTINAIXXXXXXXXXXXX------ICMKECVEGKNNVVDMLNSKINMPPCIQKILGDL 700
+N +C K + K V+D + + + +P C+ + L L
Sbjct: 62 LNKRVNPFISKFKDSSGSPRRKSLKNVCFKMYLSSKRAVIDAITNNVELPECMSRNLRLL 121
Query: 701 K 703
K
Sbjct: 122 K 122
>UniRef50_P36869 Cluster: Late expression factor 2; n=1; Lymantria
dispar MNPV|Rep: Late expression factor 2 - Lymantria
dispar multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 216
Score = 50.8 bits (116), Expect = 3e-05
Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Frame = +2
Query: 377 WSPLISASCLDKKATYLIDPDDFIDKLTLTPYTVFYNGGVLVKISGLRLYMLL------- 535
+ P + AS +D A Y + + F + ++PYTVF GG V++SG RL LL
Sbjct: 13 YRPAMKASDVDPDAEYAVPLEHF--DVEVSPYTVFERGGTCVRVSGRRLACLLRNGSRGE 70
Query: 536 --TAPPTINAIXXXXXXXXXXXXICMKECVEGKNNVVDMLNSKINMPPCIQKILGDLKKN 709
AP A +C K + + L +++N+PPC+ +L +
Sbjct: 71 SAPAPAAAAASAGQPGRKRSCKNVCFKGAT-SRRELERTLTARVNLPPCMTGLLRQFEIR 129
Query: 710 NVPRGGMYR 736
N RG YR
Sbjct: 130 N--RGDRYR 136
>UniRef50_Q0IKY2 Cluster: Lef-2; n=1; Leucania separata nuclear
polyhedrosis virus|Rep: Lef-2 - Leucania separata
nuclear polyhedrosis virus (LsNPV)
Length = 254
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/63 (39%), Positives = 39/63 (61%)
Frame = +2
Query: 374 VWSPLISASCLDKKATYLIDPDDFIDKLTLTPYTVFYNGGVLVKISGLRLYMLLTAPPTI 553
+W+P ++ S +D A+YLI P+DF + ++PYT F + G V++ G RL LL A T
Sbjct: 43 MWNPSLNNS-IDHDASYLIRPEDF--DIEISPYTSFSHDGRYVQVRGGRLRHLLNAAKTN 99
Query: 554 NAI 562
A+
Sbjct: 100 EAL 102
>UniRef50_UPI0000D56EBB Cluster: PREDICTED: similar to CG8378-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG8378-PA - Tribolium castaneum
Length = 543
Score = 35.5 bits (78), Expect = 1.4
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = -2
Query: 223 LRGSCHRCVETCYNQNSCLNACTYRARYVASYLVRVLFDLYH 98
L CH CV CYN C CT +A Y + FD+YH
Sbjct: 225 LSNHCHECVSLCYNLIPC-KTCT-QAMYCSESCRDYAFDMYH 264
>UniRef50_UPI00015B4F88 Cluster: PREDICTED: similar to conserved
hypothetical protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to conserved hypothetical protein -
Nasonia vitripennis
Length = 520
Score = 33.9 bits (74), Expect = 4.2
Identities = 14/50 (28%), Positives = 30/50 (60%)
Frame = +1
Query: 181 DCNKFLRSDDMTPVVTTITPKRTADYKITEYVSDVKTIKPSNRPLVESGP 330
+ N++LR + +TP+ TT+ K++ + + S + PS++PL++ P
Sbjct: 5 NANQYLRPEYLTPLPTTLDAKKSPLALLAQTCSQIGIDPPSSKPLLQVSP 54
>UniRef50_A0CKZ6 Cluster: Chromosome undetermined scaffold_20, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_20,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 2760
Score = 33.5 bits (73), Expect = 5.5
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = -2
Query: 214 SCHRCVETCY--NQNSCLNACTYRARYVASYLVRVLFDLYHSRVEMRQRAHC 65
SCH E+CY N N CL+ +Y+ RY+ + + Y V+ + ++ C
Sbjct: 740 SCHPLCESCYGSNSNQCLSCNSYQHRYLNNNICVCQNSYYDDGVDYKCQSIC 791
>UniRef50_Q55A63 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum|Rep: Putative uncharacterized
protein - Dictyostelium discoideum AX4
Length = 780
Score = 33.1 bits (72), Expect = 7.3
Identities = 23/99 (23%), Positives = 46/99 (46%)
Frame = +1
Query: 64 NNARVVASQHDYDRDQIKRELNSLRRNVHDMCTRSGTSFDCNKFLRSDDMTPVVTTITPK 243
NN + ++ D + IK SL +N ++ + SG +C + DD+TP+ K
Sbjct: 292 NNNNNNNNNNNSDNNNIKDISASLSKNPNENSSPSGLKVECEYYNNRDDITPIEEDYDRK 351
Query: 244 RTADYKITEYVSDVKTIKPSNRPLVESGPLVQEAAKYGR 360
+ +Y+ + + + PS +P V+ +E ++ R
Sbjct: 352 QYYEYR-DSHRENGEHGTPSIKPDVDLNKKYEELSERKR 389
>UniRef50_Q54V20 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 148
Score = 33.1 bits (72), Expect = 7.3
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Frame = +2
Query: 404 LDKKATYLIDPDDFIDKLTLTPY--TVFYNGGVLVKISGLRLYMLLTAPP 547
+ +AT++ID D +++ L + T +NG V+V ISGL L ++ T PP
Sbjct: 52 IQAEATFIIDDDKYVEMLIGMKFIPTSTHNGRVMV-ISGLPLDLVSTKPP 100
>UniRef50_Q7R484 Cluster: GLP_480_88195_92982; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_480_88195_92982 - Giardia lamblia
ATCC 50803
Length = 1595
Score = 32.7 bits (71), Expect = 9.7
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +1
Query: 151 DMCTRSGTSFDCNKFLRSDDMTPVVTTITPKRTADYKITEYVSDV 285
D C G D N + ++ TPV T+ P + K+ YV V
Sbjct: 1318 DKCIAVGADADANVLMSTEGETPVTATLRPTASLKQKLNHYVHSV 1362
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 690,506,036
Number of Sequences: 1657284
Number of extensions: 12939634
Number of successful extensions: 34739
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 33441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34720
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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