Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8h13
         (743 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.6  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   2.6  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   6.0  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   6.0  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   7.9  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -2

Query: 592 ITQGGLQSSDEALEAGIPMVCLPMMGDQFYHAH 494
           I + G ++  EAL+AG  +  +   G  FY A+
Sbjct: 103 IAKSGTKAFMEALQAGADISMIGQFGVGFYSAY 135


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/29 (27%), Positives = 12/29 (41%)
 Frame = -2

Query: 100 FPAFINAHQPEQSLLCQDVQRRKHRNEFC 14
           FP     HQ +  + C +       NE+C
Sbjct: 475 FPLLSQRHQIDAKMFCNESSVSNCENEYC 503


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 142 IIIYLVFLVCATAHF 98
           III LVF VC T ++
Sbjct: 278 IIIVLVFFVCWTPYY 292


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 142 IIIYLVFLVCATAHF 98
           III LVF VC T ++
Sbjct: 278 IIIVLVFFVCWTPYY 292


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 351 LLISAYNSAMCFLYVDALNNTSF 419
           ++I  Y+S M   Y+D + N +F
Sbjct: 217 IMIILYSSLMVLNYIDEVFNNNF 239


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,532
Number of Sequences: 336
Number of extensions: 4198
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)