Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8h13
(743 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_9495| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 1e-12
SB_17368| Best HMM Match : Glyco_tran_28_C (HMM E-Value=1.3) 68 7e-12
SB_22264| Best HMM Match : UDPGT (HMM E-Value=6.4e-11) 67 1e-11
SB_44571| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 2e-11
SB_23516| Best HMM Match : Glyco_tran_28_C (HMM E-Value=0.004) 65 5e-11
SB_24817| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 9e-11
SB_44570| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 3e-10
SB_5360| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 5e-10
SB_44502| Best HMM Match : UDPGT (HMM E-Value=2e-05) 60 1e-09
SB_26422| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 3e-09
SB_16634| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_37257| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_56407| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_18895| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_3932| Best HMM Match : Spectrin (HMM E-Value=5.2e-17) 28 7.0
SB_38354| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
>SB_9495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 698
Score = 70.5 bits (165), Expect = 1e-12
Identities = 46/169 (27%), Positives = 82/169 (48%)
Frame = -2
Query: 718 NYTILWKIDDEVVKNITLPANVITQNWFNQRAVLRHKKMAAFITQGGLQSSDEALEAGIP 539
++ +LWK+D+ N ++ NV W Q +L H K FIT G EA G+P
Sbjct: 455 SHKVLWKVDEGSYPN-SVSDNVKLVEWMPQNDILGHNKTRLFITHAGAHGMAEAGYHGVP 513
Query: 538 MVCLPMMGDQFYHAHKLQQLGVARALDTVTVSSDQLLLAINDVLFNASTYKKHMAELYAL 359
+V +P+ DQ +A L +G+ LD T +S+ ++ A+ +V+ N ++ + L
Sbjct: 514 VVAMPIFTDQPDNARMLSDVGMGVVLDINTATSEDVISAVTEVITNPRLNAARVSHI--L 571
Query: 358 INNDKATFPPLDKAIKFTERVIRYRHDISRRLYSLKTTAANVPYSNYYM 212
+ +A P+++A E V+ H + LK + ++P+ YM
Sbjct: 572 KSRQRA---PVEEAADHVEYVLAAGH-----VTHLKPRSQSMPFYRVYM 612
>SB_17368| Best HMM Match : Glyco_tran_28_C (HMM E-Value=1.3)
Length = 157
Score = 68.1 bits (159), Expect = 7e-12
Identities = 32/101 (31%), Positives = 53/101 (52%)
Frame = -2
Query: 709 ILWKIDDEVVKNITLPANVITQNWFNQRAVLRHKKMAAFITQGGLQSSDEALEAGIPMVC 530
+L K+D + ++P NV W Q VL H K FIT G E+ G+PM+C
Sbjct: 53 VLVKLDLNGLPKDSVPPNVRAVKWLPQNDVLGHSKTKLFITHAGANGLAESAYHGVPMIC 112
Query: 529 LPMMGDQFYHAHKLQQLGVARALDTVTVSSDQLLLAINDVL 407
+P+ GDQF ++ + +G+A + +++DQ + + VL
Sbjct: 113 VPIFGDQFDNSQLAKDIGIAEMIKVNDMTADQFVSTLQRVL 153
>SB_22264| Best HMM Match : UDPGT (HMM E-Value=6.4e-11)
Length = 385
Score = 67.3 bits (157), Expect = 1e-11
Identities = 43/162 (26%), Positives = 75/162 (46%)
Frame = -2
Query: 670 TLPANVITQNWFNQRAVLRHKKMAAFITQGGLQSSDEALEAGIPMVCLPMMGDQFYHAHK 491
++P+NV T W Q +L H K FIT G E+ G+PM+C+P+ GD +A
Sbjct: 201 SIPSNVRTVKWLPQNDLLGHSKTKLFITHAGANGLAESAYHGVPMICVPLFGDHNQNAQV 260
Query: 490 LQQLGVARALDTVTVSSDQLLLAINDVLFNASTYKKHMAELYALINNDKATFPPLDKAIK 311
+ +G+A + +++DQL + VL Y ++ A + ++ K P+ +A
Sbjct: 261 AKDVGIAEVVMLSDITADQLFSVMQAVL-KGKRYHENSARVSRVMR--KRPRAPVVEAAD 317
Query: 310 FTERVIRYRHDISRRLYSLKTTAANVPYSNYYMYKSVLSIVM 185
E V H + L+ ++P+ YM + +VM
Sbjct: 318 LVEYVQALGH-----MGHLRPHGFSLPFYQLYMLDVLAVLVM 354
>SB_44571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 428
Score = 66.9 bits (156), Expect = 2e-11
Identities = 44/173 (25%), Positives = 89/173 (51%)
Frame = -2
Query: 712 TILWKIDDEVVKNITLPANVITQNWFNQRAVLRHKKMAAFITQGGLQSSDEALEAGIPMV 533
T+ W+I + N++ N+ T W Q +L ++K ++ G S E+ GIP+V
Sbjct: 215 TVFWRIKGYIPANLS--PNIKTVEWLPQNDLLANQKTRVLVSHLGQNSLYESSYHGIPLV 272
Query: 532 CLPMMGDQFYHAHKLQQLGVARALDTVTVSSDQLLLAINDVLFNASTYKKHMAELYALIN 353
+P+ DQF +A + G+ ++D TV++DQL I V+ + +K++ A + L+
Sbjct: 273 GVPLCADQFDNAVLAEDRGLGLSVDINTVTADQLYRTIRRVV-DEPRFKENAARISRLMQ 331
Query: 352 NDKATFPPLDKAIKFTERVIRYRHDISRRLYSLKTTAANVPYSNYYMYKSVLS 194
+ + + P ++A + E +R+ RRL L + ++ + Y++ +L+
Sbjct: 332 DRRRS--PTEEAADWIEYTLRH-----RRLTHLCPASVHLTWYQYFLLDCILA 377
>SB_23516| Best HMM Match : Glyco_tran_28_C (HMM E-Value=0.004)
Length = 969
Score = 65.3 bits (152), Expect = 5e-11
Identities = 41/153 (26%), Positives = 71/153 (46%)
Frame = -2
Query: 670 TLPANVITQNWFNQRAVLRHKKMAAFITQGGLQSSDEALEAGIPMVCLPMMGDQFYHAHK 491
++P+NV T W Q +L H K FIT G E+ G+PM+C+P+ GD +A
Sbjct: 111 SIPSNVRTVKWLPQNDLLGHSKTKLFITHAGANGLAESAYHGVPMICVPLFGDHNQNAQV 170
Query: 490 LQQLGVARALDTVTVSSDQLLLAINDVLFNASTYKKHMAELYALINNDKATFPPLDKAIK 311
+ +G+A + +++DQL + VL Y ++ A + ++ K P+ +A
Sbjct: 171 AKDVGIAEVVMLSDITADQLFSVMQAVL-KGKRYHENSARVSRVMR--KRPRAPVVEAAD 227
Query: 310 FTERVIRYRHDISRRLYSLKTTAANVPYSNYYM 212
E V H + L+ ++P+ YM
Sbjct: 228 LVEYVQALGH-----MGHLRPHGFSLPFYQLYM 255
>SB_24817| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 556
Score = 64.5 bits (150), Expect = 9e-11
Identities = 44/172 (25%), Positives = 89/172 (51%)
Frame = -2
Query: 712 TILWKIDDEVVKNITLPANVITQNWFNQRAVLRHKKMAAFITQGGLQSSDEALEAGIPMV 533
T+ W+ + N++ N+ W Q +L +KK F++ GL S E+ GIP+V
Sbjct: 361 TVFWRQRGYIPSNLS--NNIKIVEWLPQNDLLANKKTRVFVSHLGLNSLYESGYHGIPVV 418
Query: 532 CLPMMGDQFYHAHKLQQLGVARALDTVTVSSDQLLLAINDVLFNASTYKKHMAELYALIN 353
+P+ GDQ +A +++ G+ A+D TV++D+L I V+ + +K++ A + L+
Sbjct: 419 GVPIYGDQPDNAVLMEEKGLGLAVDIHTVTADELYRTIRRVI-DEKRFKENAARISRLMQ 477
Query: 352 NDKATFPPLDKAIKFTERVIRYRHDISRRLYSLKTTAANVPYSNYYMYKSVL 197
+ K + P ++ + E +R+ RL L+ + ++ + Y++ +L
Sbjct: 478 DRKRS--PTEEGADWIEYTLRH-----GRLTHLRPASVHLSWYQYFLLDVML 522
>SB_44570| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 795
Score = 62.9 bits (146), Expect = 3e-10
Identities = 43/172 (25%), Positives = 89/172 (51%)
Frame = -2
Query: 712 TILWKIDDEVVKNITLPANVITQNWFNQRAVLRHKKMAAFITQGGLQSSDEALEAGIPMV 533
T++W+ + N++ N+ T W Q +L ++K F++ G S EA GIP+V
Sbjct: 494 TVIWRQKGYIPANLS--PNIKTVEWLPQNDLLANEKTRVFVSHLGQNSLYEAGYHGIPLV 551
Query: 532 CLPMMGDQFYHAHKLQQLGVARALDTVTVSSDQLLLAINDVLFNASTYKKHMAELYALIN 353
+P+ GDQ +A ++ G+ A+D TV++D+L I V+ + +K++ + L+
Sbjct: 552 GVPLFGDQPDNAVLVEDKGLGLAVDIHTVTADKLYRTIRRVI-DEPRFKENAVRISRLMQ 610
Query: 352 NDKATFPPLDKAIKFTERVIRYRHDISRRLYSLKTTAANVPYSNYYMYKSVL 197
+ + + P ++A + E +R+ RL L+ + ++ + Y++ +L
Sbjct: 611 DRRRS--PTEEAADWIEYTLRH-----GRLTHLRPASIHLTWYQYFLLDVML 655
Score = 57.6 bits (133), Expect = 1e-08
Identities = 32/102 (31%), Positives = 55/102 (53%)
Frame = -2
Query: 712 TILWKIDDEVVKNITLPANVITQNWFNQRAVLRHKKMAAFITQGGLQSSDEALEAGIPMV 533
T+ W+ + N++ N+ T W Q +L ++K F++ G S EA GIP+V
Sbjct: 89 TVFWRQKGYIPANLS--PNIKTVEWLPQNDLLANEKTRVFVSHLGQNSLYEAGYHGIPLV 146
Query: 532 CLPMMGDQFYHAHKLQQLGVARALDTVTVSSDQLLLAINDVL 407
+P+ GDQ +A ++ G+ A+D TV++D+L I V+
Sbjct: 147 GVPLFGDQSENAVLVEDKGLGLAVDIHTVTADELYRTIRRVI 188
>SB_5360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 506
Score = 62.1 bits (144), Expect = 5e-10
Identities = 42/172 (24%), Positives = 88/172 (51%)
Frame = -2
Query: 712 TILWKIDDEVVKNITLPANVITQNWFNQRAVLRHKKMAAFITQGGLQSSDEALEAGIPMV 533
T+ W+ + N++ N+ T W Q +L ++K F++ G S E+ GIP+V
Sbjct: 282 TVFWRQKGYIPANLS--PNIKTVEWLPQNDLLANEKTRLFVSHLGQNSLYESGYRGIPLV 339
Query: 532 CLPMMGDQFYHAHKLQQLGVARALDTVTVSSDQLLLAINDVLFNASTYKKHMAELYALIN 353
+P+ GDQF +A ++ G+ +D TV++D+ AI V+ + +K++ A + L+
Sbjct: 340 GVPLWGDQFDNAVLVKDKGLGLVVDIHTVTADEFYRAIRRVI-DEPGFKENAARISRLMR 398
Query: 352 NDKATFPPLDKAIKFTERVIRYRHDISRRLYSLKTTAANVPYSNYYMYKSVL 197
+ + + P +A + E +R+ + L L+ + ++ + Y++ +L
Sbjct: 399 DRRRS--PTQEAADWIEYTLRHGN-----LTHLRPASVHLTWYQYFLLDVML 443
>SB_44502| Best HMM Match : UDPGT (HMM E-Value=2e-05)
Length = 261
Score = 60.5 bits (140), Expect = 1e-09
Identities = 45/181 (24%), Positives = 83/181 (45%)
Frame = -2
Query: 739 NTFKALDNYTILWKIDDEVVKNITLPANVITQNWFNQRAVLRHKKMAAFITQGGLQSSDE 560
N F L Y ++ K D K NV+ W Q +L + + FIT GG S E
Sbjct: 60 NVFSKL-KYKVIIKFGDSFPKT----DNVMLVKWMPQNDILANSNVKLFITHGGANSVYE 114
Query: 559 ALEAGIPMVCLPMMGDQFYHAHKLQQLGVARALDTVTVSSDQLLLAINDVLFNASTYKKH 380
G+P++ P+ DQF + K++ G+ ++ ++++++ IN+ L YK++
Sbjct: 115 GCGHGVPLLVTPLFSDQFGYGEKVKAAGLGISVSLKESTAEEMIKNINE-LIEKPCYKEN 173
Query: 379 MAELYALINNDKATFPPLDKAIKFTERVIRYRHDISRRLYSLKTTAANVPYSNYYMYKSV 200
+ L+ DK P + A + E VIR + L+ + ++P+ Y++ +
Sbjct: 174 ALRVSRLM-EDKPQTPQQEGAF-WIEYVIR-----NNGTQHLRPSGRDLPFYQYFLLDVM 226
Query: 199 L 197
L
Sbjct: 227 L 227
>SB_26422| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 536
Score = 59.3 bits (137), Expect = 3e-09
Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 1/177 (0%)
Frame = -2
Query: 715 YTILWKI-DDEVVKNITLPANVITQNWFNQRAVLRHKKMAAFITQGGLQSSDEALEAGIP 539
+ I+W++ K+++ NV W Q +L H FI GG E G+P
Sbjct: 341 HKIIWRVYPGNYPKSVS--DNVKLVEWVPQNDILGHNNTKLFINHGGANGMAETAYHGVP 398
Query: 538 MVCLPMMGDQFYHAHKLQQLGVARALDTVTVSSDQLLLAINDVLFNASTYKKHMAELYAL 359
+VC P DQ +++ L+ G+ + T ++++L+ + V+ N +YK + A +
Sbjct: 399 VVCSPFFADQPDNSNLLKNAGMGEIVRVNTATAEELVRVVTKVI-NDDSYKTNGARVSRA 457
Query: 358 INNDKATFPPLDKAIKFTERVIRYRHDISRRLYSLKTTAANVPYSNYYMYKSVLSIV 188
+ + P+ +A F E V+ H L LK + +P+ YM V++++
Sbjct: 458 MKSRPR--EPVKEAADFVEYVLAQGH-----LPHLKPRSLAMPFYQVYML-DVMAVI 506
>SB_16634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 88
Score = 32.3 bits (70), Expect = 0.43
Identities = 20/66 (30%), Positives = 29/66 (43%)
Frame = -2
Query: 688 EVVKNITLPANVITQNWFNQRAVLRHKKMAAFITQGGLQSSDEALEAGIPMVCLPMMGDQ 509
E+V+ L N+ + A L K A + GG + A+ A +P + P M DQ
Sbjct: 24 EMVRKNVLYCNIYCVTQYTPHAQL-FPKCLAVMHHGGSGTVASAIRASVPQIVCPFMFDQ 82
Query: 508 FYHAHK 491
Y A K
Sbjct: 83 SYWADK 88
>SB_37257| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 741
Score = 29.5 bits (63), Expect = 3.0
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3
Query: 6 ACEQNSFRCFRL*TSWHN 59
ACE N+ RC+RL WH+
Sbjct: 654 ACEYNNIRCYRLQFRWHS 671
>SB_56407| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2028
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = -2
Query: 640 WFNQRAVLRHKKMAAFITQGGLQSSDEALEAGIPMVCLPMMGDQFYHAHKLQQLGVA 470
W A L H + ++ + GL+SSDE+ ++ I M C M H+ + +A
Sbjct: 939 WSEPPAHLLHGVLRGYLMRYGLRSSDESQKSIIFMQCQMFMNVTELEKHEEYEFSIA 995
>SB_18895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 520
Score = 28.7 bits (61), Expect = 5.3
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 9/53 (16%)
Frame = +1
Query: 415 RLSPVIVDRWKR*QCPRRGLRRV----AVICAHGK--TGRPSW---ADTPWVF 546
R + V+ RW R CP+ G R + A +HGK TG S+ + PW F
Sbjct: 272 RATGVVYTRWGRTTCPQGGARSIYSGQAAATSHGKGRTGGSSFECMPNRPWFF 324
>SB_3932| Best HMM Match : Spectrin (HMM E-Value=5.2e-17)
Length = 1426
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = -2
Query: 445 SSDQLLLAINDVLFNASTYKKHMAELYALINNDKATFPPLDKAIKFTE-RVIRYRHDISR 269
SSD++ LA + L + Y++ + ++++ NND +++ I E + +R +H
Sbjct: 57 SSDEMDLARKERLGRWAEYRERLLQIHSTSNNDLTDITAMEQPITIEELKNLRDQHVTGG 116
Query: 268 RLYSLKTTAANVP 230
+ +TT VP
Sbjct: 117 DHVTGETTVEMVP 129
>SB_38354| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -3
Query: 159 VNKCYSSLFTWFFWFVRLRTSQPL*TLTNQSSHYC 55
+NK + LF + F+R R+S P+ + HYC
Sbjct: 5 INKVFRDLFLESYSFLRDRSSCPVTRTAKERVHYC 39
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,632,430
Number of Sequences: 59808
Number of extensions: 506576
Number of successful extensions: 1031
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1031
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2010148439
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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