Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8h12
         (281 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   2.5  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    20   4.4  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    20   5.8  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    20   5.8  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    20   5.8  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    20   5.8  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 2.5
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 280 FFFIILSFIDMLPKYYQNLPYNGKRIFEKFY 188
           FF + LS  D++  +   LP     I  +FY
Sbjct: 77  FFILHLSIADLITAFLSVLPQLAWDITYRFY 107


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 20.2 bits (40), Expect = 4.4
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -2

Query: 133 CAVRKKYILIDCKWQP 86
           C ++ K +L+D   QP
Sbjct: 2   CQIKNKLLLLDSSTQP 17


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 19.8 bits (39), Expect = 5.8
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = -2

Query: 280 FFFIILSFIDMLPKYYQNLPYNGKRIFEK 194
           FF+ I +   ++P Y    P + K +++K
Sbjct: 16  FFYKICNIFGIVPPYSFEKPDSQKSLWKK 44


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 19.8 bits (39), Expect = 5.8
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 96  LQSINMYFFLTAQHASLV 149
           L++  ++FFLT   ASL+
Sbjct: 84  LEANRLFFFLTGVMASLL 101


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 19.8 bits (39), Expect = 5.8
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = -2

Query: 280 FFFIILSFIDMLPKYYQNLPYNGKRIFEK 194
           FF+ I +   ++P Y    P + K +++K
Sbjct: 16  FFYKICNIFGIVPPYSFEKPDSQKSLWKK 44


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 19.8 bits (39), Expect = 5.8
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 96  LQSINMYFFLTAQHASLV 149
           L++  ++FFLT   ASL+
Sbjct: 84  LEANRLFFFLTGVMASLL 101


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,201
Number of Sequences: 336
Number of extensions: 936
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  4790565
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)