Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8h12
         (281 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT004494-1|AAO42658.1| 1113|Drosophila melanogaster GH24302p pro...    27   3.6  
AY058737-1|AAL13966.1|  792|Drosophila melanogaster LP03320p pro...    27   3.6  
AY051513-1|AAK92937.1|  613|Drosophila melanogaster GH16590p pro...    27   3.6  
AE014297-721|AAF54208.1|  613|Drosophila melanogaster CG9630-PA ...    27   3.6  
AE013599-3073|AAF46627.2|  792|Drosophila melanogaster CG9985-PA...    27   3.6  
AY071212-1|AAL48834.1|  364|Drosophila melanogaster RE25729p pro...    26   6.2  
AY069864-1|AAL40009.1|  439|Drosophila melanogaster SD10604p pro...    26   8.2  
AE013599-810|AAF58975.2|  439|Drosophila melanogaster CG8008-PA ...    26   8.2  

>BT004494-1|AAO42658.1| 1113|Drosophila melanogaster GH24302p protein.
          Length = 1113

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -2

Query: 244  PKYYQNLPYNGKRIFEKFYDRSLQKYKSTH 155
            P Y   L  N + + + FY+R++ KY  TH
Sbjct: 1053 PDYNPQLKENIRMLPDGFYERTVNKYNITH 1082


>AY058737-1|AAL13966.1|  792|Drosophila melanogaster LP03320p
           protein.
          Length = 792

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -2

Query: 250 MLPKYYQNLPYNGKRIFEKFYDRSLQKYKSTHI 152
           +LP YY NL  N + +  KF+      Y S ++
Sbjct: 281 LLPGYYMNLSQNPRTLLPKFFGLYCFHYNSKNV 313


>AY051513-1|AAK92937.1|  613|Drosophila melanogaster GH16590p
           protein.
          Length = 613

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +2

Query: 185 IVEFFKYPLTVIGKVLIIF 241
           ++EF   P TVIGKV++ F
Sbjct: 255 LLEFLSSPATVIGKVMVFF 273


>AE014297-721|AAF54208.1|  613|Drosophila melanogaster CG9630-PA
           protein.
          Length = 613

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +2

Query: 185 IVEFFKYPLTVIGKVLIIF 241
           ++EF   P TVIGKV++ F
Sbjct: 255 LLEFLSSPATVIGKVMVFF 273


>AE013599-3073|AAF46627.2|  792|Drosophila melanogaster CG9985-PA
           protein.
          Length = 792

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -2

Query: 250 MLPKYYQNLPYNGKRIFEKFYDRSLQKYKSTHI 152
           +LP YY NL  N + +  KF+      Y S ++
Sbjct: 281 LLPGYYMNLSQNPRTLLPKFFGLYCFHYNSKNV 313


>AY071212-1|AAL48834.1|  364|Drosophila melanogaster RE25729p
           protein.
          Length = 364

 Score = 26.2 bits (55), Expect = 6.2
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +1

Query: 166 YIFVNYDRRIFQISSYRYREG 228
           YIF ++D+ + + + YRYR G
Sbjct: 124 YIFPSFDQIVNEAAKYRYRSG 144


>AY069864-1|AAL40009.1|  439|Drosophila melanogaster SD10604p
           protein.
          Length = 439

 Score = 25.8 bits (54), Expect = 8.2
 Identities = 13/49 (26%), Positives = 26/49 (53%)
 Frame = +1

Query: 94  IYSLSICIFS*QHNMLAW*LYVSTYIFVNYDRRIFQISSYRYREGFDNI 240
           IY  S+  +    N ++  LY+ +++F+ Y  RI     YRY++ +  +
Sbjct: 393 IYKRSLTTYPGLFNFVSSFLYLLSFVFIGYVLRI----KYRYKQHYAKV 437


>AE013599-810|AAF58975.2|  439|Drosophila melanogaster CG8008-PA
           protein.
          Length = 439

 Score = 25.8 bits (54), Expect = 8.2
 Identities = 13/49 (26%), Positives = 26/49 (53%)
 Frame = +1

Query: 94  IYSLSICIFS*QHNMLAW*LYVSTYIFVNYDRRIFQISSYRYREGFDNI 240
           IY  S+  +    N ++  LY+ +++F+ Y  RI     YRY++ +  +
Sbjct: 393 IYKRSLTTYPGLFNFVSSFLYLLSFVFIGYVLRI----KYRYKQHYAKV 437


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,482,532
Number of Sequences: 53049
Number of extensions: 135288
Number of successful extensions: 305
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 305
length of database: 24,988,368
effective HSP length: 72
effective length of database: 21,168,840
effective search space used: 444545640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)