BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8h11
(684 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxida... 25 0.76
AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxida... 23 3.1
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 22 4.1
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 21 7.1
AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosin... 21 7.1
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 21 9.4
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 21 9.4
AM292334-1|CAL23146.2| 390|Tribolium castaneum gustatory recept... 21 9.4
AM292333-1|CAL23145.2| 316|Tribolium castaneum gustatory recept... 21 9.4
AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix... 21 9.4
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 21 9.4
>AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxidase
subunit 1 protein.
Length = 682
Score = 24.6 bits (51), Expect = 0.76
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 621 LNSFNVTDVLGNFVVGSSFGRDRCHYG 541
L F DVLGN + S +R +YG
Sbjct: 334 LTEFEGIDVLGNIIESSILSPNRNYYG 360
>AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxidase
subunit 2 protein.
Length = 683
Score = 22.6 bits (46), Expect = 3.1
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 600 DVLGNFVVGSSFGRDRCHYG 541
D+LGN + S +R +YG
Sbjct: 341 DILGNMIESSILSPNRTYYG 360
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 22.2 bits (45), Expect = 4.1
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = +2
Query: 38 ARRPPSGNIGKFENIYNWVVCAYLSWRW 121
+ +PP K ++ Y +VC + +W W
Sbjct: 1382 SEKPPLPEELKPQSGYFKIVCYFTNWAW 1409
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 21.4 bits (43), Expect = 7.1
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 487 RSGTSFDCNKFLRSDDMTPVVTTITP-KRTADYKITEYVS 603
+SG S+ NK + D +PV + P T+ + + VS
Sbjct: 53 KSGGSYSSNKNVSRADHSPVFGKVEPVPHTSSFNMGYLVS 92
>AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosine
kinase Torso-likeprotein protein.
Length = 803
Score = 21.4 bits (43), Expect = 7.1
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 493 GTSFDCNKFLRSDDMTPVVTT 555
G SF + LRSDD+ T+
Sbjct: 135 GVSFSKKQILRSDDLAVKTTS 155
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 21.0 bits (42), Expect = 9.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +2
Query: 2 TSICTPNDRRAKARRPPSG 58
+S+C+P +R PSG
Sbjct: 147 SSVCSPGSGHQDSRTSPSG 165
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 21.0 bits (42), Expect = 9.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +2
Query: 2 TSICTPNDRRAKARRPPSG 58
+S+C+P +R PSG
Sbjct: 147 SSVCSPGSGHQDSRTSPSG 165
>AM292334-1|CAL23146.2| 390|Tribolium castaneum gustatory receptor
candidate 13 protein.
Length = 390
Score = 21.0 bits (42), Expect = 9.4
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2
Query: 644 STNGRLDGLIVLTSLTY 594
+TNG LD LIV S Y
Sbjct: 333 TTNGDLDELIVTLSAHY 349
>AM292333-1|CAL23145.2| 316|Tribolium castaneum gustatory receptor
candidate 12 protein.
Length = 316
Score = 21.0 bits (42), Expect = 9.4
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2
Query: 644 STNGRLDGLIVLTSLTY 594
+TNG LD LIV S Y
Sbjct: 259 TTNGDLDELIVTLSTHY 275
>AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix
transcription factor protein.
Length = 249
Score = 21.0 bits (42), Expect = 9.4
Identities = 9/37 (24%), Positives = 21/37 (56%)
Frame = +1
Query: 148 MQAEIKSLRLMRLKRCTSSFLIMPSIRSRNRVKWSKC 258
++ +K L+ ++ ++ S PS+ S+ R +S+C
Sbjct: 81 LEMTVKHLQNLQRQQAAMSAATDPSVVSKFRAGFSEC 117
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 21.0 bits (42), Expect = 9.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +2
Query: 2 TSICTPNDRRAKARRPPSG 58
+S+C+P +R PSG
Sbjct: 147 SSVCSPGSGHQDSRTSPSG 165
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,257
Number of Sequences: 336
Number of extensions: 3174
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -