Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8h02
         (719 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    27   0.77 
AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.    26   1.0  
AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450 pr...    25   3.1  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   5.4  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    24   5.4  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   7.2  
AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase...    23   9.5  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 26.6 bits (56), Expect = 0.77
 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 5/61 (8%)
 Frame = -3

Query: 402  QDHSS*YQWQLHHHGVPRIT-----SPYDISGPLQVMVNEWQSSEAELHQQATKSASQPS 238
            Q H    Q QL HH  P+++     S     GP   +++   S  +       KSA QP 
Sbjct: 1320 QQHQQHQQHQLQHHHQPQLSQSSHHSSSSHGGPTPSIISHTPSLSSASGSIGPKSADQPG 1379

Query: 237  A 235
            A
Sbjct: 1380 A 1380


>AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.
          Length = 163

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = -3

Query: 438 APSCSRTSSVGLQDHSS*YQWQLHHHGVPRITSPYDISGPLQVMVNEWQSS 286
           AP     S    QD     Q QLHH G   + SP+       V V+++ +S
Sbjct: 51  APLSMSKSQTPPQDTVGTAQHQLHHQGHSPVASPHSALSLSPVSVSKFDTS 101


>AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450
           protein.
          Length = 509

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -1

Query: 263 QPRAHHNLQQSFAIFVRILMLDCDSNLLKEIINLLFLKFHD 141
           Q R    +  SF  F+ I+M+ CD  L+K ++   F  FHD
Sbjct: 68  QDRGERYMGYSF-FFMPIVMV-CDIELVKTVLVKDFAVFHD 106


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 635  HLWSRWSRSVLS 670
            H+W+RW R  LS
Sbjct: 1639 HIWNRWHREYLS 1650


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +1

Query: 442 PPTRVVSTPLDAFSLARLLPDKKLASWDQTLHLERKRTC 558
           P   VV+ P+DA S A L+   +      T  LE  R C
Sbjct: 89  PGNMVVAGPIDAGSCALLMAQLQNIGAQLTTALEELRLC 127


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 443 GRHHLAHVHH 414
           G HHL H+HH
Sbjct: 815 GSHHLHHLHH 824


>AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase
           protein.
          Length = 309

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -1

Query: 449 VGGRHHLAHVHHQWGFRITALDT 381
           +GGR  L  +H  WG   T  DT
Sbjct: 105 LGGRFVLDQMHFHWGSEHTLDDT 127


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 820,260
Number of Sequences: 2352
Number of extensions: 17249
Number of successful extensions: 64
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)