Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8h02
(719 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 386 e-108
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 386 e-108
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 136 1e-32
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 136 1e-32
Z81534-4|CAB04345.1| 277|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z81493-4|CAB04041.1| 165|Caenorhabditis elegans Hypothetical pr... 29 4.4
U00041-2|AAA50670.1| 128|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z66521-11|CAA91398.2| 471|Caenorhabditis elegans Hypothetical p... 28 5.8
Z29094-6|CAD45581.1| 457|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z29094-5|CAA82336.1| 465|Caenorhabditis elegans Hypothetical pr... 28 5.8
U70855-5|AAB09160.2| 886|Caenorhabditis elegans Hypothetical pr... 28 5.8
U55857-10|AAA98035.2| 895|Caenorhabditis elegans Hypothetical p... 28 5.8
AC093703-5|AAL00865.1| 725|Caenorhabditis elegans Hypothetical ... 28 5.8
AB031233-1|BAA92262.1| 605|Caenorhabditis elegans kinesin like ... 28 5.8
Z73973-5|CAA98267.2| 882|Caenorhabditis elegans Hypothetical pr... 28 7.7
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 386 bits (950), Expect = e-108
Identities = 169/238 (71%), Positives = 203/238 (85%)
Frame = +3
Query: 6 KLMNRLWGENFFNPQTKKWSKQKDDDNKRSFCMYVLDPIYKVFDAIMKFKKEEIDDLLKK 185
KLM LWG+ FF+ +TKKWS + D++KR FC +VLDPI+ VFDA+M KK++ L++K
Sbjct: 253 KLMKNLWGDRFFDLKTKKWSSTQTDESKRGFCQFVLDPIFMVFDAVMNIKKDKTAALVEK 312
Query: 186 IGVTIKHEDSDKDGKALLKVVMRSWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGPHD 365
+G+ + +++ D +GK L+KV MR WLPAG+ +LQMIA HLPSPV AQKYRMEMLYEGPHD
Sbjct: 313 LGIKLANDEKDLEGKPLMKVFMRKWLPAGDTMLQMIAFHLPSPVTAQKYRMEMLYEGPHD 372
Query: 366 DEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFTPGK 545
DEAA+ IK+CDP PLMMY+SKMVPTSDKGRFYAFGRVFSGKV TG KARI GPN+ PGK
Sbjct: 373 DEAAVAIKTCDPNGPLMMYISKMVPTSDKGRFYAFGRVFSGKVATGMKARIQGPNYVPGK 432
Query: 546 KEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITTFKNAHNMKV 719
KEDLYEKTIQRTILMMGR++E IED+PSGNI GLVGVDQ+LVK GTITT+K+AHNM+V
Sbjct: 433 KEDLYEKTIQRTILMMGRFIEPIEDIPSGNIAGLVGVDQYLVKGGTITTYKDAHNMRV 490
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 386 bits (950), Expect = e-108
Identities = 169/238 (71%), Positives = 203/238 (85%)
Frame = +3
Query: 6 KLMNRLWGENFFNPQTKKWSKQKDDDNKRSFCMYVLDPIYKVFDAIMKFKKEEIDDLLKK 185
KLM LWG+ FF+ +TKKWS + D++KR FC +VLDPI+ VFDA+M KK++ L++K
Sbjct: 253 KLMKNLWGDRFFDLKTKKWSSTQTDESKRGFCQFVLDPIFMVFDAVMNIKKDKTAALVEK 312
Query: 186 IGVTIKHEDSDKDGKALLKVVMRSWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGPHD 365
+G+ + +++ D +GK L+KV MR WLPAG+ +LQMIA HLPSPV AQKYRMEMLYEGPHD
Sbjct: 313 LGIKLANDEKDLEGKPLMKVFMRKWLPAGDTMLQMIAFHLPSPVTAQKYRMEMLYEGPHD 372
Query: 366 DEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFTPGK 545
DEAA+ IK+CDP PLMMY+SKMVPTSDKGRFYAFGRVFSGKV TG KARI GPN+ PGK
Sbjct: 373 DEAAVAIKTCDPNGPLMMYISKMVPTSDKGRFYAFGRVFSGKVATGMKARIQGPNYVPGK 432
Query: 546 KEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITTFKNAHNMKV 719
KEDLYEKTIQRTILMMGR++E IED+PSGNI GLVGVDQ+LVK GTITT+K+AHNM+V
Sbjct: 433 KEDLYEKTIQRTILMMGRFIEPIEDIPSGNIAGLVGVDQYLVKGGTITTYKDAHNMRV 490
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 136 bits (330), Expect = 1e-32
Identities = 64/224 (28%), Positives = 124/224 (55%), Gaps = 1/224 (0%)
Frame = +3
Query: 18 RLWGENFFNPQTKKWSKQKDD-DNKRSFCMYVLDPIYKVFDAIMKFKKEEIDDLLKKIGV 194
RLWG+ +F +T+K+ K+ D R+F ++L+P+YK+F ++ + D++ ++G+
Sbjct: 346 RLWGDIYFEKKTRKFVKKSPSHDAPRTFVQFILEPMYKIFSQVVGDVDTCLPDVMAELGI 405
Query: 195 TIKHEDSDKDGKALLKVVMRSWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGPHDDEA 374
+ E+ + + L+ ++ + + A + ++ ++ SP+ K ++E Y GP D +
Sbjct: 406 RLSKEEQKMNVRPLIALICKRFFGDFSAFVDLVVQNIKSPLENAKTKIEQTYLGPADSQL 465
Query: 375 AIGIKSCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFTPGKKED 554
A ++ C+ E PLM++ +K P D +F+ FGRV SG + R++G N++ +ED
Sbjct: 466 AQEMQKCNAEGPLMVHTTKNYPVDDATQFHVFGRVMSGTLEANTDVRVLGENYSIQDEED 525
Query: 555 LYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTI 686
T+ R + + Y + VP+G + G+DQ +VKT TI
Sbjct: 526 CRRMTVGRLFVRVASYQIEVSRVPAGCWVLIEGIDQPIVKTATI 569
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 136 bits (330), Expect = 1e-32
Identities = 64/224 (28%), Positives = 124/224 (55%), Gaps = 1/224 (0%)
Frame = +3
Query: 18 RLWGENFFNPQTKKWSKQKDD-DNKRSFCMYVLDPIYKVFDAIMKFKKEEIDDLLKKIGV 194
RLWG+ +F +T+K+ K+ D R+F ++L+P+YK+F ++ + D++ ++G+
Sbjct: 221 RLWGDIYFEKKTRKFVKKSPSHDAPRTFVQFILEPMYKIFSQVVGDVDTCLPDVMAELGI 280
Query: 195 TIKHEDSDKDGKALLKVVMRSWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGPHDDEA 374
+ E+ + + L+ ++ + + A + ++ ++ SP+ K ++E Y GP D +
Sbjct: 281 RLSKEEQKMNVRPLIALICKRFFGDFSAFVDLVVQNIKSPLENAKTKIEQTYLGPADSQL 340
Query: 375 AIGIKSCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFTPGKKED 554
A ++ C+ E PLM++ +K P D +F+ FGRV SG + R++G N++ +ED
Sbjct: 341 AQEMQKCNAEGPLMVHTTKNYPVDDATQFHVFGRVMSGTLEANTDVRVLGENYSIQDEED 400
Query: 555 LYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTI 686
T+ R + + Y + VP+G + G+DQ +VKT TI
Sbjct: 401 CRRMTVGRLFVRVASYQIEVSRVPAGCWVLIEGIDQPIVKTATI 444
>Z81534-4|CAB04345.1| 277|Caenorhabditis elegans Hypothetical
protein F37H8.5 protein.
Length = 277
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = -1
Query: 278 SFTSRQPRAHHNLQQSFAIFVRILMLDCDSNLLKEIINLLFLKF 147
SF + A HN + + + + L DC + L K++ ++F F
Sbjct: 62 SFCDKHRAATHNQKINITVLIEALCPDCQNFLTKQLYPIVFKNF 105
>Z81493-4|CAB04041.1| 165|Caenorhabditis elegans Hypothetical
protein F01D5.5 protein.
Length = 165
Score = 28.7 bits (61), Expect = 4.4
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = -2
Query: 682 VPVLTKN*STPTRPQMLPEGTSSIASTXXXXXXXXXXXVFSYKSSFFPGVKFGPMMRAFC 503
V L +N +T T + +S+ S+ S K+ K+ PM++AFC
Sbjct: 23 VEELAENTTTTTEGSTVSSDSSTAGSSEAPCQDDPSTDCASLKN-LCTNSKYTPMLKAFC 81
Query: 502 PVT--TLPEKTRPK 467
PVT P T P+
Sbjct: 82 PVTCNMCPGATTPE 95
>U00041-2|AAA50670.1| 128|Caenorhabditis elegans Hypothetical
protein C03B8.3 protein.
Length = 128
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 129 VFDAIMKFKKEEIDDLLKKIGVTIKHED 212
+FDA+ K ++ +D K + VTI HED
Sbjct: 69 LFDALRKITADQYNDHKKVVEVTIDHED 96
>Z66521-11|CAA91398.2| 471|Caenorhabditis elegans Hypothetical
protein W02B12.7 protein.
Length = 471
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +3
Query: 135 DAIMKFKKEEIDDLLKKIGVTIKHEDSDKDGKALLKVVMRS 257
DAI++ +E+ DL +I V I+ D ++DG + ++ ++
Sbjct: 129 DAIIRELNDEVVDLRGQIRVAIRVRDFERDGSSNFSIISQN 169
>Z29094-6|CAD45581.1| 457|Caenorhabditis elegans Hypothetical
protein C07A9.7b protein.
Length = 457
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +3
Query: 594 GRYVEAIEDVPSGN-ICGLVGV 656
GR+VEAIED+P G +C G+
Sbjct: 29 GRFVEAIEDIPIGTVVCVETGI 50
>Z29094-5|CAA82336.1| 465|Caenorhabditis elegans Hypothetical
protein C07A9.7a protein.
Length = 465
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +3
Query: 594 GRYVEAIEDVPSGN-ICGLVGV 656
GR+VEAIED+P G +C G+
Sbjct: 29 GRFVEAIEDIPIGTVVCVETGI 50
>U70855-5|AAB09160.2| 886|Caenorhabditis elegans Hypothetical
protein K08F11.2 protein.
Length = 886
Score = 28.3 bits (60), Expect = 5.8
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = +3
Query: 24 WGENFFNPQTKKWSKQKDDDNKRS 95
W N N + ++W K ++D+N +
Sbjct: 10 WSSNLLNARKRRWKKDEEDENSNT 33
>U55857-10|AAA98035.2| 895|Caenorhabditis elegans Hypothetical
protein K08D10.1 protein.
Length = 895
Score = 28.3 bits (60), Expect = 5.8
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = +3
Query: 24 WGENFFNPQTKKWSKQKDDDNKRS 95
W N N + ++W K ++D+N +
Sbjct: 10 WSSNLLNARKRRWKKDEEDENSNT 33
>AC093703-5|AAL00865.1| 725|Caenorhabditis elegans Hypothetical
protein Y20F4.5 protein.
Length = 725
Score = 28.3 bits (60), Expect = 5.8
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = +3
Query: 24 WGENFFNPQTKKWSKQKDDDNKRS 95
W N N + ++W K ++D+N +
Sbjct: 10 WSSNLLNARKRRWKKDEEDENSNT 33
>AB031233-1|BAA92262.1| 605|Caenorhabditis elegans kinesin like
protein protein.
Length = 605
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +3
Query: 135 DAIMKFKKEEIDDLLKKIGVTIKHEDSDKDGKALLKVVMRS 257
DAI++ +E+ DL +I V I+ D ++DG + ++ ++
Sbjct: 263 DAIIRELNDEVVDLRGQIRVAIRVRDFERDGSSNFSIISQN 303
>Z73973-5|CAA98267.2| 882|Caenorhabditis elegans Hypothetical protein
F25D1.4 protein.
Length = 882
Score = 27.9 bits (59), Expect = 7.7
Identities = 26/108 (24%), Positives = 47/108 (43%)
Frame = -2
Query: 328 FWATTGDGK*MAII*SRASPAGNQERITTFSKALPSLSESSCLIVTPIFLRRSSISSFLN 149
F A T + A++ A+ ++ + FSK L L E + + F+R +S N
Sbjct: 737 FLAATESRRKFAVLTGIAADESFSDKFSNFSKCLDELHEKAPNLKKTRFIRGEWLSRLRN 796
Query: 148 FMMASNTL*IGSKTYMQNERLLSSSFCFDHFFV*GLKKFSPHNLFISL 5
++ + + + + N LL F F HF + + +NLF+ L
Sbjct: 797 QVLMAQSYSPTPQYDVVN--LLHIKFYFAHFKQETILQERSYNLFLLL 842
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,996,466
Number of Sequences: 27780
Number of extensions: 407450
Number of successful extensions: 1306
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1300
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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