Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8g18
         (727 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    26   0.36 
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    23   1.9  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   2.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.3  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   4.4  

>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +1

Query: 220 LTNTSKYYDGVHFLRAGLLYKKIQVPGQTLPSES 321
           +  T + Y  VHF+   L    I   G TLP ES
Sbjct: 52  IKETLRLYPSVHFISRTLGQDLITTGGYTLPKES 85


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 689 NPTVDWNNATDRLQSKRSKR 630
           NP V  ++ T+  +SKRSKR
Sbjct: 63  NPAVQGSSLTEGKRSKRSKR 82


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 14/59 (23%), Positives = 23/59 (38%)
 Frame = +1

Query: 136 FAYVTSEEDVWTTEQIVKQNPSIGAIIDLTNTSKYYDGVHFLRAGLLYKKIQVPGQTLP 312
           F  V  +  +  T  +    PS+     + + SKY D ++ +   L      V GQ  P
Sbjct: 168 FREVWDQHGLLLTAAVAAAGPSVDLSYHVPSLSKYLDFINVMAYDLHGSWESVTGQNAP 226


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 213 YCSNTGVLFYYLFCGPHIFFASH 145
           YC+   +L  Y FC   I F +H
Sbjct: 289 YCALIILLCIYYFCRAFIIFPTH 311


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 544 KLINLERNFVFQFCDLWLFQIYL 476
           K + L  N +     LW+FQ+YL
Sbjct: 191 KTLKLSINII-SLVQLWIFQLYL 212


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,715
Number of Sequences: 336
Number of extensions: 3963
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)