Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8g18
(727 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38919| Best HMM Match : Fumarate_red_D (HMM E-Value=4.7) 47 9e-13
SB_41282| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_59355| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_12537| Best HMM Match : DSPc (HMM E-Value=1.3e-09) 36 0.033
SB_36904| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.044
SB_54054| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_14525| Best HMM Match : Phospholip_A2_1 (HMM E-Value=2.2) 33 0.31
SB_25734| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.95
SB_11967| Best HMM Match : Pollen_allerg_2 (HMM E-Value=1.7) 30 1.7
SB_16698| Best HMM Match : Y_phosphatase (HMM E-Value=0) 30 2.2
SB_10767| Best HMM Match : DSPc (HMM E-Value=2.5e-07) 30 2.2
SB_22355| Best HMM Match : Y_phosphatase (HMM E-Value=0) 29 2.9
SB_10701| Best HMM Match : DSPc (HMM E-Value=0) 29 2.9
SB_57625| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_902| Best HMM Match : Collagen (HMM E-Value=0.00027) 29 5.1
SB_4303| Best HMM Match : Defensin_beta (HMM E-Value=0.85) 28 6.7
SB_3552| Best HMM Match : PH (HMM E-Value=0.15) 28 6.7
SB_3100| Best HMM Match : SCP (HMM E-Value=1.5e-20) 28 6.7
SB_16910| Best HMM Match : EGF (HMM E-Value=0) 28 8.9
SB_40834| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
>SB_38919| Best HMM Match : Fumarate_red_D (HMM E-Value=4.7)
Length = 479
Score = 46.8 bits (106), Expect(2) = 9e-13
Identities = 16/55 (29%), Positives = 33/55 (60%)
Frame = +1
Query: 175 EQIVKQNPSIGAIIDLTNTSKYYDGVHFLRAGLLYKKIQVPGQTLPSESIVQEFI 339
EQ+ ++ +G ++D T T++YYD F G++YKK+ G +P + ++ ++
Sbjct: 229 EQLAQREMKLGLVLDFTFTTRYYDPREFTAEGIIYKKMMCAGHVIPKKKDIKRYL 283
Score = 44.4 bits (100), Expect(2) = 9e-13
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +1
Query: 433 RYLMHTLGIAPQEAINRFEKARGHKIERQNYVQD 534
RYL+ G P++AI F +ARGH +ER+NY++D
Sbjct: 281 RYLIDCCGYEPEKAIEAFNQARGHPLERENYLED 314
>SB_41282| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +1
Query: 310 PSESIVQEFIDTVEEFTEKCPGMLVGVHCTHGINRTGYMVCRYLMH 447
P +++ F D V+E+ + + +HC G RTG M+C YL+H
Sbjct: 38 PPFELIKPFCDDVDEWLKASNLNVAIIHCKAGKGRTGVMICAYLLH 83
>SB_59355| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 165
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +1
Query: 262 RAGLLYKKIQVPGQTLPSESIVQEFIDTVEEFTE-KCPGMLVGVHCTHGINRTGYMVCRY 438
R ++YK+IQ+ E I Q F + + E + G V VHC G++R+ + Y
Sbjct: 61 REDIIYKRIQINDSY--QEDIGQHFDEAIAFIDEARSRGSSVLVHCHAGVSRSATVTVAY 118
Query: 439 LMHTLGIAPQEAINRFEKAR 498
+M LG++ EA ++ R
Sbjct: 119 VMQHLGLSLNEAYQFVKEKR 138
>SB_12537| Best HMM Match : DSPc (HMM E-Value=1.3e-09)
Length = 195
Score = 35.9 bits (79), Expect = 0.033
Identities = 22/65 (33%), Positives = 31/65 (47%)
Frame = +1
Query: 310 PSESIVQEFIDTVEEFTEKCPGMLVGVHCTHGINRTGYMVCRYLMHTLGIAPQEAINRFE 489
PS + E + +EE K G V VHC G R+ +V YLM + + P+EA +
Sbjct: 109 PSLDNLSEGVKFIEEIRSK--GDSVYVHCKAGRGRSATLVACYLMKNMALNPEEAHLFIK 166
Query: 490 KARGH 504
R H
Sbjct: 167 SKRPH 171
>SB_36904| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 318
Score = 35.5 bits (78), Expect = 0.044
Identities = 21/79 (26%), Positives = 36/79 (45%)
Frame = +1
Query: 241 YDGVHFLRAGLLYKKIQVPGQTLPSESIVQEFIDTVEEFTEKCPGMLVGVHCTHGINRTG 420
YD F G + +P+++IV+ F ++ C G V +HC G+ RTG
Sbjct: 197 YDARCFTANGFAHSDQYFEDGGIPTKAIVKRFTRILDH----CEGA-VAIHCRAGLGRTG 251
Query: 421 YMVCRYLMHTLGIAPQEAI 477
++ YL+ + EA+
Sbjct: 252 TLIACYLIKQYKFSAAEAV 270
>SB_54054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4232
Score = 33.1 bits (72), Expect = 0.24
Identities = 17/67 (25%), Positives = 33/67 (49%)
Frame = +1
Query: 331 EFIDTVEEFTEKCPGMLVGVHCTHGINRTGYMVCRYLMHTLGIAPQEAINRFEKARGHKI 510
+ I V+ + +KC L VHC+ G+ RTG + C + + + ++ F+ + +
Sbjct: 3599 DLIGQVQRWQQKCGVQLTAVHCSAGVGRTG-VFCAVSILIERLKAEAMVDVFQTVKQLRE 3657
Query: 511 ERQNYVQ 531
+R VQ
Sbjct: 3658 QRPAMVQ 3664
>SB_14525| Best HMM Match : Phospholip_A2_1 (HMM E-Value=2.2)
Length = 462
Score = 32.7 bits (71), Expect = 0.31
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +1
Query: 19 KIESTCKMFPARWHNYLQCGQVIKDSNLICFKTPLQ-PELFAYVTSEEDVWTTEQIVKQN 195
+IE + F + L Q DS+++C P++ P +A + ++EDV TTE + ++
Sbjct: 401 EIEMYYERFQPEEKHILAFHQGFHDSSVVCLFDPVKSPRCYAIIANKEDVQTTEAHITES 460
Query: 196 PS 201
S
Sbjct: 461 VS 462
>SB_25734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1938
Score = 31.1 bits (67), Expect = 0.95
Identities = 20/101 (19%), Positives = 43/101 (42%), Gaps = 1/101 (0%)
Frame = +1
Query: 295 PGQTLPSESI-VQEFIDTVEEFTEKCPGMLVGVHCTHGINRTGYMVCRYLMHTLGIAPQE 471
P + +P + V + +D + ++C V V C++G+ R+G C + ++
Sbjct: 1832 PDKCIPELACSVLDLLDEAQTSQQQCGNAPVLVQCSNGVGRSG-TFCAISSVLERLKTEQ 1890
Query: 472 AINRFEKARGHKIERQNYVQDXXXXXXXFAFFNKYFILFSN 594
I+ F+ + ++ V+ + KYF FS+
Sbjct: 1891 VIDVFQVIKRIRVNLPGAVESPTQYLFCYQIIQKYFDSFSD 1931
>SB_11967| Best HMM Match : Pollen_allerg_2 (HMM E-Value=1.7)
Length = 1815
Score = 30.3 bits (65), Expect = 1.7
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Frame = +1
Query: 151 SEEDVWTTEQIVKQNPSIG-AIIDLTNTSKYYDGVHFLRAGLLYKKIQVPGQTLPSESIV 327
S D W TE++++ + SI +IDL N + Y+D L L K++ L S S
Sbjct: 155 STNDKWETEEVIQNDHSIKYKLIDLQNFAIYWDSDAPLVGDLPSTKLEKHSYILESISAS 214
Query: 328 QEF--IDTVEEFTEKCPGMLVGVH 393
+ T +K P +V VH
Sbjct: 215 AKLQRNATALPLRDKNPRFVVDVH 238
>SB_16698| Best HMM Match : Y_phosphatase (HMM E-Value=0)
Length = 839
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 273 VIQKNSSTWPDFAV*KHRSRIY*HGRRIYRKVSRHVGGRALH 398
++Q + + WPD V H + + RRI VSR G +H
Sbjct: 323 IVQYHYTAWPDHGVPTHATSLLAFIRRIRNSVSRDAGPIVVH 364
>SB_10767| Best HMM Match : DSPc (HMM E-Value=2.5e-07)
Length = 324
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Frame = +1
Query: 274 LYKKIQVPGQTLPSESIVQEF-IDTVEEFTEKCPGML-----VGVHCTHGINRTGYMVCR 435
LYK+ + LP E + E I+ + + G+L V VHC G+ R+ +VC
Sbjct: 211 LYKEEGISYIWLPMEDLSTESRIENLPQGVYLLHGLLNNGHRVYVHCNGGVGRSTAIVCG 270
Query: 436 YLMHTL 453
+LM+ L
Sbjct: 271 FLMYVL 276
>SB_22355| Best HMM Match : Y_phosphatase (HMM E-Value=0)
Length = 1252
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 295 PGQTLPSESI-VQEFIDTVEEFTEKCPGMLVGVHCTHGINRTG 420
P LP + + + I VE++ ++ + VHC+ G+ RTG
Sbjct: 1118 PDSGLPESGVGLIDLIGQVEKWQQQSGNTCITVHCSGGVGRTG 1160
>SB_10701| Best HMM Match : DSPc (HMM E-Value=0)
Length = 365
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +1
Query: 334 FIDTVEEFTEKCPGMLVGVHCTHGINRTGYMVCRYLMHTLGIAPQEAINRFEKAR 498
FID+V K G V VHC GI+R+ + YL+ L EA +K R
Sbjct: 248 FIDSV-----KASGGRVLVHCQAGISRSATICLAYLISRLNFRLDEAYEYVKKRR 297
>SB_57625| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1751
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/104 (18%), Positives = 45/104 (43%), Gaps = 1/104 (0%)
Frame = +1
Query: 286 IQVPGQTLP-SESIVQEFIDTVEEFTEKCPGMLVGVHCTHGINRTGYMVCRYLMHTLGIA 462
I+ P + P + V + + V+ ++C + V C++G+ R+G Y + I
Sbjct: 1617 IEWPDKCAPVNHQSVLDLVSWVQLSQQQCGDKAIVVQCSNGVGRSGTFCAIYSL-LERIK 1675
Query: 463 PQEAINRFEKARGHKIERQNYVQDXXXXXXXFAFFNKYFILFSN 594
++ ++ F+ + ++ R V+ + +Y FS+
Sbjct: 1676 AEQVVDVFQTVKVLRLGRPGAVETLTQYIYCYQMVQRYLDSFSD 1719
>SB_902| Best HMM Match : Collagen (HMM E-Value=0.00027)
Length = 617
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 716 NIVVENIRPNPTVDWNNATDRLQSKRSKRS 627
N +++NI NPT++ N+ R Q KR+
Sbjct: 580 NALIDNIPVNPTINGNHGNKRSQEMNEKRA 609
>SB_4303| Best HMM Match : Defensin_beta (HMM E-Value=0.85)
Length = 203
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 8/62 (12%)
Frame = -3
Query: 191 CFTICSVVHTSSSLVTYANNSGC------KGVLKHIRLE--SFITWPHCK*LCQRAGNIL 36
C T V+H + +L+ Y ++S C + V+ H+ L ++T HC C+ +L
Sbjct: 100 CHTRIVVLHDTLALLCYMSHSHCCATCHTRTVVLHVTLALLCYMTHSHCCVTCRTRTVVL 159
Query: 35 HV 30
HV
Sbjct: 160 HV 161
>SB_3552| Best HMM Match : PH (HMM E-Value=0.15)
Length = 486
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/93 (20%), Positives = 38/93 (40%), Gaps = 3/93 (3%)
Frame = +1
Query: 52 RWHNYLQCGQVIKDSNLICFKTPLQPELFAYVTSEEDV---WTTEQIVKQNPSIGAIIDL 222
+W N+ +C +++ S L + Y S + W + + + G+++
Sbjct: 108 QWSNHSRCIFILRGSACSDLVARLTSLGYLYKRSSNSIKQEWKKKYVTLLDD--GSLVYY 165
Query: 223 TNTSKYYDGVHFLRAGLLYKKIQVPGQTLPSES 321
N Y D VH L + +++PG+ P S
Sbjct: 166 PNMHDYMDDVHAKVLNLKHTTVKIPGKRPPKAS 198
>SB_3100| Best HMM Match : SCP (HMM E-Value=1.5e-20)
Length = 191
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 271 LLYKKIQVPGQTLPSESIVQEFIDTVEEFTEKCPG 375
L+Y+ PG+ LP+E V ++ D + + K PG
Sbjct: 77 LIYRCSSGPGEVLPAEKAVTDWYDEICMYNFKQPG 111
>SB_16910| Best HMM Match : EGF (HMM E-Value=0)
Length = 1552
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 337 IDTVEEFTEKCPGMLVGVHCTHGINRTG 420
ID V+++ +C GV+C H IN G
Sbjct: 720 IDRVDDYECRCAPGYTGVNCDHNINDCG 747
>SB_40834| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1299
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 318 KHRSRIY*HGRRIYRKVSRHVGGRALHTRH*SHRLHGVQI-FNAHPGYCAAGSHK*I*KS 494
K ++++ H R +Y H HT H + R HG +A Y AGSH+ +
Sbjct: 976 KLQNKLQRHTRTVYIATRTHCLHSDTHTVHIARRTHGTNSDTHALRTYRHAGSHERRKRK 1035
Query: 495 QRSQN*KTKLRSR 533
+R + + + R R
Sbjct: 1036 RRRKRKRRRKRKR 1048
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,318,313
Number of Sequences: 59808
Number of extensions: 468184
Number of successful extensions: 1206
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1205
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1937927537
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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