Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8g17
(324 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P24081 Cluster: Putative alkaline exonuclease; n=15; Nu... 71 7e-12
UniRef50_Q9J894 Cluster: ORF41 alkaline exonuclease; n=3; Nucleo... 37 0.099
UniRef50_Q22E41 Cluster: Neurohypophysial hormones, N-terminal D... 36 0.13
UniRef50_Q9ZPS9 Cluster: Serine/threonine-protein kinase BRI1-li... 36 0.13
UniRef50_Q6QXH5 Cluster: ORF115; n=2; Granulovirus|Rep: ORF115 -... 35 0.30
UniRef50_Q3LWD4 Cluster: DNA-directed RNA polymerase; n=1; Bigel... 34 0.53
UniRef50_A4NDD1 Cluster: Magnesium/nickel/cobalt transporter Cor... 34 0.70
UniRef50_Q6JKC9 Cluster: Alkaline exonuclease; n=1; Neodiprion s... 33 1.2
UniRef50_Q9LPA0 Cluster: T32E20.20; n=2; Arabidopsis thaliana|Re... 33 1.6
UniRef50_Q8QLI0 Cluster: Alkaline exonuclease ALK-EXO; n=3; Nucl... 32 2.1
UniRef50_Q54JS2 Cluster: Putative uncharacterized protein; n=1; ... 32 2.1
UniRef50_Q7RB02 Cluster: Chloroquine resistance marker protein; ... 32 2.8
UniRef50_P74303 Cluster: Slr0938 protein; n=7; Cyanobacteria|Rep... 31 3.7
UniRef50_Q0TQ46 Cluster: Phytoene dehydrogenase family protein; ... 31 3.7
UniRef50_Q54WC8 Cluster: OB fold-containing protein, nucleic aci... 31 3.7
UniRef50_Q5AJH2 Cluster: Putative uncharacterized protein; n=1; ... 31 3.7
UniRef50_Q16690 Cluster: Dual specificity protein phosphatase 5;... 31 3.7
UniRef50_A4J8H0 Cluster: Putative uncharacterized protein; n=2; ... 31 4.9
UniRef50_Q5BW63 Cluster: SJCHGC05682 protein; n=1; Schistosoma j... 31 4.9
UniRef50_UPI00015B51D0 Cluster: PREDICTED: similar to rCG30240; ... 31 6.5
UniRef50_UPI000155461D Cluster: PREDICTED: similar to EGDC3042; ... 31 6.5
UniRef50_Q77K41 Cluster: Alkaline exonuclease; n=3; Nucleopolyhe... 31 6.5
UniRef50_Q26DE4 Cluster: Putative uncharacterized protein; n=1; ... 31 6.5
UniRef50_Q8IC32 Cluster: Putative uncharacterized protein PF07_0... 31 6.5
UniRef50_O17679 Cluster: Putative uncharacterized protein set-6;... 31 6.5
UniRef50_Q7RL67 Cluster: Histone acetyltransferase GCN5-related;... 30 8.6
UniRef50_Q7RJK4 Cluster: DNA-directed RNA polymerase; n=13; Euka... 30 8.6
UniRef50_Q4Z3U6 Cluster: Putative uncharacterized protein; n=1; ... 30 8.6
UniRef50_A5KB21 Cluster: DNA-directed RNA polymerase; n=1; Plasm... 30 8.6
UniRef50_P32690 Cluster: Uncharacterized protein yjbI; n=6; Ente... 30 8.6
UniRef50_Q6IPM2 Cluster: IQ domain-containing protein E; n=21; E... 30 8.6
>UniRef50_P24081 Cluster: Putative alkaline exonuclease; n=15;
Nucleopolyhedrovirus|Rep: Putative alkaline exonuclease
- Orgyia pseudotsugata multicapsid polyhedrosis virus
(OpMNPV)
Length = 424
Score = 70.5 bits (165), Expect = 7e-12
Identities = 34/96 (35%), Positives = 50/96 (52%)
Frame = +3
Query: 6 FSSNSREACDSVLKREHTNCKSFNLKHKNFDNPTYFDYVKRLQSLLKSHHFRNDAKTLAY 185
F+ + A + + R H C L+ FDN + D+ KR SL+ +DA+ L
Sbjct: 321 FALDGPRAFELAMARPHEQCDGLALQEHEFDNVAFLDFTKRYTSLVDKRC--DDARALRV 378
Query: 186 FGYYLTHTGTLKTFCCGVQNSSPTKHDHLNNCVYYL 293
G+Y+ G +KTFCCGV S+ ++ HL C YYL
Sbjct: 379 DGFYVDDAGAVKTFCCGVHGSNASRR-HLPTCSYYL 413
>UniRef50_Q9J894 Cluster: ORF41 alkaline exonuclease; n=3;
Nucleopolyhedrovirus|Rep: ORF41 alkaline exonuclease -
Spodoptera exigua MNPV
Length = 413
Score = 36.7 bits (81), Expect = 0.099
Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +3
Query: 99 NPTYFDYVKRLQSLLKSHHFRNDAKTLAYFGYYLTHTG--TLKTFCCGVQ-NSSPTKHDH 269
N Y D+ +R++SLL RN LA G Y TLKTFCCG++ + K H
Sbjct: 346 NKKYIDHHRRVESLLD----RNKNPKLADEGIYCDDDDDETLKTFCCGIEMDRDNGKVKH 401
Query: 270 LNNCVYYL 293
C Y L
Sbjct: 402 SVTCKYNL 409
>UniRef50_Q22E41 Cluster: Neurohypophysial hormones, N-terminal Domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Neurohypophysial hormones, N-terminal Domain
containing protein - Tetrahymena thermophila SB210
Length = 6552
Score = 36.3 bits (80), Expect = 0.13
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 162 NDAKTLAYFGYYLTHTGTLKTFCCGVQNSSPTKHDHLNNC 281
N L Y+GYYLT T CCG+QN S ++++ C
Sbjct: 997 NKKCALCYYGYYLTDNNT----CCGIQNCSICNTNNISQC 1032
>UniRef50_Q9ZPS9 Cluster: Serine/threonine-protein kinase BRI1-like
2 precursor; n=5; Magnoliophyta|Rep:
Serine/threonine-protein kinase BRI1-like 2 precursor -
Arabidopsis thaliana (Mouse-ear cress)
Length = 1143
Score = 36.3 bits (80), Expect = 0.13
Identities = 24/53 (45%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +3
Query: 3 DFSSNSREACDSVLKREHTNCKSFNLKHKNFDN--PTYFDYVKRLQSLLKSHH 155
DFS NS S TN KS NL + NFD P F +K LQSL SH+
Sbjct: 210 DFSGNSISGYISDSLINCTNLKSLNLSYNNFDGQIPKSFGELKLLQSLDLSHN 262
>UniRef50_Q6QXH5 Cluster: ORF115; n=2; Granulovirus|Rep: ORF115 -
Agrotis segetum granulosis virus (AsGV) (Agrotis
segetumgranulovirus)
Length = 397
Score = 35.1 bits (77), Expect = 0.30
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Frame = +3
Query: 6 FSSNSREACDSVLKREHTNC-KSFNLKHKNFDNPTYFDYVKRLQSLLK--SHHFRNDAKT 176
F + E L+ H+NC K+ N+ H + Y + R+ +L K S+ ++ +
Sbjct: 300 FCKSKYETSTPFLEMTHSNCDKTDNISHVDIKFFNYINQKDRVNNLNKYCSYDYQQCIEL 359
Query: 177 LAYFGYYLTHTGTLKTFCCGVQNSSPTKHD 266
+Y TLK FCCG + K D
Sbjct: 360 ANQGFFYDPSDNTLKLFCCGEIDKHSQKCD 389
>UniRef50_Q3LWD4 Cluster: DNA-directed RNA polymerase; n=1;
Bigelowiella natans|Rep: DNA-directed RNA polymerase -
Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 1329
Score = 34.3 bits (75), Expect = 0.53
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +3
Query: 33 DSVLKREHTNCKSFNLKHKNFDNPTYFDYVKRLQSLLKSHHFRNDAKTLAYFGYY 197
+++ K++ N F K F N Y +Y + LKS++F+ +AY YY
Sbjct: 547 ENLKKKKSFNSVPFKYFTKVFSNNLYINYSLESMNFLKSNYFKKTTLNMAYGSYY 601
>UniRef50_A4NDD1 Cluster: Magnesium/nickel/cobalt transporter CorA;
n=3; Proteobacteria|Rep: Magnesium/nickel/cobalt
transporter CorA - Haemophilus influenzae PittAA
Length = 521
Score = 33.9 bits (74), Expect = 0.70
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +3
Query: 36 SVLKREHTNCKSFNLKHK---NFDNPTYFDYVKRLQSL 140
S+L+ EH + K+F LKH+ N D P YF + LQ +
Sbjct: 5 SILELEHHDAKAFFLKHESYCNIDLPRYFSFTNLLQKI 42
>UniRef50_Q6JKC9 Cluster: Alkaline exonuclease; n=1; Neodiprion
sertifer NPV|Rep: Alkaline exonuclease - Neodiprion
sertifer NPV
Length = 399
Score = 33.1 bits (72), Expect = 1.2
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +3
Query: 24 EACDSVLKREHTNCKSFNLKHKNFDNPTY-FDYVKRLQSLLKSHHFRNDAKTLAYFGYYL 200
E C + K E + + K+K + Y ++YV RL + H F DA LA+ G+Y
Sbjct: 227 EFCAELCKNELSTIEKIRNKNKYIEYCNYMYEYV-RLSTF--KHTFI-DADILAFLGFYH 282
Query: 201 THTGTLKTFCCGVQNSSPTKHD 266
H G +K C + + HD
Sbjct: 283 EH-GIVKCIFCKYETNQTCLHD 303
>UniRef50_Q9LPA0 Cluster: T32E20.20; n=2; Arabidopsis thaliana|Rep:
T32E20.20 - Arabidopsis thaliana (Mouse-ear cress)
Length = 672
Score = 32.7 bits (71), Expect = 1.6
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +3
Query: 153 HFRNDAKTLAYFGYYLTHTGTLKTFCCGVQNSSPTKHDHLNNCVYYLE 296
H+ +D KT + GYY+ H N T DHL C++ E
Sbjct: 482 HYSSDFKTYNWTGYYVNHLNGTSHTDAATNNKWFTNVDHLYGCLFVNE 529
>UniRef50_Q8QLI0 Cluster: Alkaline exonuclease ALK-EXO; n=3;
Nucleopolyhedrovirus|Rep: Alkaline exonuclease ALK-EXO -
Mamestra configurata NPV-A
Length = 395
Score = 32.3 bits (70), Expect = 2.1
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +3
Query: 108 YFDYVKRLQSLLKSHHFRNDAKTLAYFGYYLTHTGT-LKTFCCGVQNSSPTKHDHLNNCV 284
Y ++ KR++SL +H+ D +LA G Y H G LKTFCC S H +C
Sbjct: 336 YLNHNKRVESL--THNGVADV-SLAKQGVY--HDGVQLKTFCCNTIVGSNNTVGHTKDC- 389
Query: 285 YYLEI 299
YY+++
Sbjct: 390 YYVKL 394
>UniRef50_Q54JS2 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 854
Score = 32.3 bits (70), Expect = 2.1
Identities = 20/89 (22%), Positives = 40/89 (44%)
Frame = +3
Query: 9 SSNSREACDSVLKREHTNCKSFNLKHKNFDNPTYFDYVKRLQSLLKSHHFRNDAKTLAYF 188
+SN+ + +S ++N + N H+N +N + + S +H+F + +F
Sbjct: 36 NSNNSNSINSNSNNSNSNNSNNNNHHQNNNNSRNHNILST--STPSTHNFVGSPSSSTFF 93
Query: 189 GYYLTHTGTLKTFCCGVQNSSPTKHDHLN 275
TG+ +F G Q+ + H H+N
Sbjct: 94 NPLHNSTGSSLSFFNGTQHFTHNHHGHMN 122
>UniRef50_Q7RB02 Cluster: Chloroquine resistance marker protein;
n=3; Plasmodium (Vinckeia)|Rep: Chloroquine resistance
marker protein - Plasmodium yoelii yoelii
Length = 651
Score = 31.9 bits (69), Expect = 2.8
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +3
Query: 6 FSSNSREACDSVLKREHTNCKSFNLKHKNFDNPTYFDYVKRLQSLLKSH 152
++ N C +V K E+ + NL + + ++Y+K+L+ LLK +
Sbjct: 495 YTFNEASKCINVKKNEYVHVDKINLNIEKYTFDEKWNYIKKLEKLLKQY 543
>UniRef50_P74303 Cluster: Slr0938 protein; n=7; Cyanobacteria|Rep:
Slr0938 protein - Synechocystis sp. (strain PCC 6803)
Length = 459
Score = 31.5 bits (68), Expect = 3.7
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 117 YVKRLQSLLKSHHFRNDAKTLAYFGYYLTHTGTLKTFCCGVQNSSPTKH 263
Y++ + + S + +L Y G YL+H G + CG Q S P H
Sbjct: 208 YLEEIPHAVDSIYCPQCGTSLDYRGVYLSHLGDYQCPSCGFQKSQPAFH 256
>UniRef50_Q0TQ46 Cluster: Phytoene dehydrogenase family protein;
n=3; cellular organisms|Rep: Phytoene dehydrogenase
family protein - Clostridium perfringens (strain ATCC
13124 / NCTC 8237 / Type A)
Length = 499
Score = 31.5 bits (68), Expect = 3.7
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = +3
Query: 84 HKNFDNPTYFDYVKRLQSLLKSHHFRNDAKTLAYFGYYLTHTGTLKTFCCGVQNSSPTKH 263
+++F Y+ Y K L L+K H F+N KT+ + + L F C SP K
Sbjct: 144 NRSFFTLNYWRYFKSLPELIKIHPFKNCYKTIEEY-ISNEYLKNLLAFQCMYIGESPLKS 202
Query: 264 DHLNNCV 284
++ N +
Sbjct: 203 SNVFNLI 209
>UniRef50_Q54WC8 Cluster: OB fold-containing protein, nucleic acid
binding; n=1; Dictyostelium discoideum AX4|Rep: OB
fold-containing protein, nucleic acid binding -
Dictyostelium discoideum AX4
Length = 549
Score = 31.5 bits (68), Expect = 3.7
Identities = 20/85 (23%), Positives = 34/85 (40%)
Frame = +3
Query: 42 LKREHTNCKSFNLKHKNFDNPTYFDYVKRLQSLLKSHHFRNDAKTLAYFGYYLTHTGTLK 221
L H K N+ N T FD+ KR L + ++++ K + + + H K
Sbjct: 108 LNFHHKGLKPLNIA--NSQRETTFDFKKRFILNLMHNTYKDEIKRVVVYEDRINHVDLFK 165
Query: 222 TFCCGVQNSSPTKHDHLNNCVYYLE 296
+F + + K H+ YLE
Sbjct: 166 SFLASLPSLDSYKVKHIEEESKYLE 190
>UniRef50_Q5AJH2 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 162
Score = 31.5 bits (68), Expect = 3.7
Identities = 11/27 (40%), Positives = 21/27 (77%)
Frame = -2
Query: 128 PFNIIKVCRIVKVFMFQIKTFTVGMLA 48
P+ ++K+C +K+F+F I FT+G+L+
Sbjct: 28 PYRVLKMC--IKLFLFMIYVFTIGVLS 52
>UniRef50_Q16690 Cluster: Dual specificity protein phosphatase 5;
n=27; Euteleostomi|Rep: Dual specificity protein
phosphatase 5 - Homo sapiens (Human)
Length = 384
Score = 31.5 bits (68), Expect = 3.7
Identities = 21/81 (25%), Positives = 38/81 (46%)
Frame = +3
Query: 30 CDSVLKREHTNCKSFNLKHKNFDNPTYFDYVKRLQSLLKSHHFRNDAKTLAYFGYYLTHT 209
C++ + R T C ++ +K K F FDY+K+ +S++ S +F + L Y L T
Sbjct: 263 CEAGISRSPTICMAYLMKTKQFRLKEAFDYIKQRRSMV-SPNFGFMGQLLQYESEILPST 321
Query: 210 GTLKTFCCGVQNSSPTKHDHL 272
+ C + + + HL
Sbjct: 322 PNPQPPSCQGEAAGSSLIGHL 342
>UniRef50_A4J8H0 Cluster: Putative uncharacterized protein; n=2;
Desulfotomaculum reducens MI-1|Rep: Putative
uncharacterized protein - Desulfotomaculum reducens MI-1
Length = 270
Score = 31.1 bits (67), Expect = 4.9
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +3
Query: 114 DYVKRLQSL-LKSHHFRNDAKTLAYFGYYLTHTGTLKTFCCGVQNSSPTKHDHLN 275
DY+ ++ + S H N A YL HT ++KT C G S T+ +N
Sbjct: 162 DYIGGTKTTTVNSTHTVNSAVCSGSVDCYLNHTASMKTMCAGSFTSGKTEKGEVN 216
>UniRef50_Q5BW63 Cluster: SJCHGC05682 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC05682 protein - Schistosoma
japonicum (Blood fluke)
Length = 426
Score = 31.1 bits (67), Expect = 4.9
Identities = 27/83 (32%), Positives = 38/83 (45%)
Frame = +3
Query: 30 CDSVLKREHTNCKSFNLKHKNFDNPTYFDYVKRLQSLLKSHHFRNDAKTLAYFGYYLTHT 209
CDS L R++ N + + N D +Y V SLLK HH +NDA + Y +
Sbjct: 26 CDSQLIRKNINSCAQTSTNDNQDG-SYNCCV----SLLK-HHSQNDATIMFDNSYPINTN 79
Query: 210 GTLKTFCCGVQNSSPTKHDHLNN 278
G K C +N S + LN+
Sbjct: 80 GVYKNHCDSCRNISSQVDNMLND 102
>UniRef50_UPI00015B51D0 Cluster: PREDICTED: similar to rCG30240;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
rCG30240 - Nasonia vitripennis
Length = 1518
Score = 30.7 bits (66), Expect = 6.5
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 75 NLKHKNFDNPTYFDYVKRLQS 137
N H + +NP Y +YVKRLQS
Sbjct: 848 NKSHDDANNPDYLEYVKRLQS 868
>UniRef50_UPI000155461D Cluster: PREDICTED: similar to EGDC3042;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED: similar to
EGDC3042 - Ornithorhynchus anatinus
Length = 962
Score = 30.7 bits (66), Expect = 6.5
Identities = 20/74 (27%), Positives = 31/74 (41%)
Frame = +3
Query: 57 TNCKSFNLKHKNFDNPTYFDYVKRLQSLLKSHHFRNDAKTLAYFGYYLTHTGTLKTFCCG 236
TN K+ LK KN + +RLQ +K + + + G ++ TGT C G
Sbjct: 405 TNDKAVQLKQKNLSTQIKENLSERLQDRVKLPLKKRMVQVGIHLGAWVLSTGTAAACCIG 464
Query: 237 VQNSSPTKHDHLNN 278
V S + L +
Sbjct: 465 VYYLSESNFKFLTD 478
>UniRef50_Q77K41 Cluster: Alkaline exonuclease; n=3;
Nucleopolyhedrovirus|Rep: Alkaline exonuclease -
Helicoverpa armigera NPV
Length = 428
Score = 30.7 bits (66), Expect = 6.5
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +3
Query: 141 LKSHHFRNDAKTLAYFG-YYLTHTGTLKTFCCGVQNSSPTKHDHLNNCVY 287
LKS R A +G +Y T+T KTFCCG+ + H +NC Y
Sbjct: 372 LKSLVARGADSRFAKWGLFYDTNTKRYKTFCCGLSIDN-FNITHTDNCEY 420
>UniRef50_Q26DE4 Cluster: Putative uncharacterized protein; n=1;
Flavobacteria bacterium BBFL7|Rep: Putative
uncharacterized protein - Flavobacteria bacterium BBFL7
Length = 111
Score = 30.7 bits (66), Expect = 6.5
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 48 REHTNCKSFNLKHKNFDNPTYFDYVKRLQSLLKSHH 155
+EH F H+ F+N T + +KR+Q +K H+
Sbjct: 37 KEHVEKSDFRTIHRVFNNDTDYQSLKRVQEYVKHHN 72
>UniRef50_Q8IC32 Cluster: Putative uncharacterized protein
PF07_0014; n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PF07_0014 - Plasmodium
falciparum (isolate 3D7)
Length = 1058
Score = 30.7 bits (66), Expect = 6.5
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +3
Query: 3 DFSSNSREACDSVLKREHTNCKSFNLKHKNFDNPTYFDYVKRLQSLLKSHHFRND 167
D S+N E + TN ++ NLK K FD+ Y+K+L + +K++ ND
Sbjct: 478 DISNNMNEKMKHIKTSLLTNQETCNLKKKCFDDCLL--YLKQLYTFIKNYENNND 530
>UniRef50_O17679 Cluster: Putative uncharacterized protein set-6;
n=1; Caenorhabditis elegans|Rep: Putative
uncharacterized protein set-6 - Caenorhabditis elegans
Length = 708
Score = 30.7 bits (66), Expect = 6.5
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 78 LKHKNFDNPTYFDYVKRLQSLLKSHHFRNDAKTLAYFGYYLTHTGT 215
L+ K +NP Y+D + L HHF DAK G + H+ T
Sbjct: 519 LREKYKNNPEYYDVLDELSK----HHFHLDAKMQGSVGRFANHSCT 560
>UniRef50_Q7RL67 Cluster: Histone acetyltransferase GCN5-related;
n=3; Plasmodium (Vinckeia)|Rep: Histone
acetyltransferase GCN5-related - Plasmodium yoelii
yoelii
Length = 1402
Score = 30.3 bits (65), Expect = 8.6
Identities = 20/68 (29%), Positives = 30/68 (44%)
Frame = +3
Query: 75 NLKHKNFDNPTYFDYVKRLQSLLKSHHFRNDAKTLAYFGYYLTHTGTLKTFCCGVQNSSP 254
N + N +NP F+ K L ++ S +F A Y G + +G +N
Sbjct: 352 NYVNNNMNNP--FNVNKNL--IMGSKNFNLTASGKTYRGNKINESGKTTNGIMVKENEEE 407
Query: 255 TKHDHLNN 278
+HDHLNN
Sbjct: 408 YRHDHLNN 415
>UniRef50_Q7RJK4 Cluster: DNA-directed RNA polymerase; n=13;
Eukaryota|Rep: DNA-directed RNA polymerase - Plasmodium
yoelii yoelii
Length = 2594
Score = 30.3 bits (65), Expect = 8.6
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = +3
Query: 123 KRLQSLLKSHHFRNDAKTLAYFGYYLTHTGTLKTF 227
K L+ + +++ + D + L++ ++THTG LK+F
Sbjct: 2494 KELKKVFEAYGIKIDFRHLSFISDFMTHTGDLKSF 2528
>UniRef50_Q4Z3U6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 49
Score = 30.3 bits (65), Expect = 8.6
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 39 VLKREHTNCKSFNLKHKNFDNPTYFDYVKRL 131
+ +R N KSFNLK KN + F Y+K L
Sbjct: 19 IYRRSSNNIKSFNLKLKNKKDFISFPYIKNL 49
>UniRef50_A5KB21 Cluster: DNA-directed RNA polymerase; n=1; Plasmodium
vivax|Rep: DNA-directed RNA polymerase - Plasmodium vivax
Length = 2695
Score = 30.3 bits (65), Expect = 8.6
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = +3
Query: 123 KRLQSLLKSHHFRNDAKTLAYFGYYLTHTGTLKTF 227
K L+ + +++ + D + L++ ++THTG LK+F
Sbjct: 2595 KELKKVFEAYGIKIDFRHLSFISDFMTHTGDLKSF 2629
>UniRef50_P32690 Cluster: Uncharacterized protein yjbI; n=6;
Enterobacteriaceae|Rep: Uncharacterized protein yjbI -
Escherichia coli (strain K12)
Length = 442
Score = 30.3 bits (65), Expect = 8.6
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
Frame = +3
Query: 3 DFSSNSREACD-SVLKREHTNCKSFNLKHKNFDN-PTYFDYVKRLQSL-LKSHHFRNDAK 173
DFS N + D S + H+N + +++ NFDN Y + R + L K F
Sbjct: 91 DFSKNILDTVDFSQSQLGHSNFRECQIRNSNFDNCYLYASHFTRAEFLSAKEISFIKSNL 150
Query: 174 TLAYFGYYLTHTGTLK 221
T F Y TG K
Sbjct: 151 TAVMFDYVRMSTGNFK 166
>UniRef50_Q6IPM2 Cluster: IQ domain-containing protein E; n=21;
Eutheria|Rep: IQ domain-containing protein E - Homo
sapiens (Human)
Length = 695
Score = 30.3 bits (65), Expect = 8.6
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 33 DSVLKREHTNCKSFNLKHKNFDNPTYFDYVKRLQSLLKS 149
D + + T+ K+ NL+ TY++ V RLQ+LL S
Sbjct: 230 DGTISKLQTDMKTTNLEEMRIAMETYYEEVHRLQTLLAS 268
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 289,609,028
Number of Sequences: 1657284
Number of extensions: 4816573
Number of successful extensions: 13234
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 12950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13232
length of database: 575,637,011
effective HSP length: 84
effective length of database: 436,425,155
effective search space used: 10037778565
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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