Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8g17
(324 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292344-1|CAL23156.1| 291|Tribolium castaneum gustatory recept... 23 0.80
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 22 1.4
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 3.2
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 21 3.2
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 3.2
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 3.2
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 21 3.2
AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 21 3.2
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 21 3.2
DQ855499-1|ABH88186.1| 124|Tribolium castaneum chemosensory pro... 20 7.5
AM292381-1|CAL23193.2| 364|Tribolium castaneum gustatory recept... 19 9.9
AJ829922-1|CAH25640.1| 193|Tribolium castaneum twist bHLH trans... 19 9.9
>AM292344-1|CAL23156.1| 291|Tribolium castaneum gustatory receptor
candidate 23 protein.
Length = 291
Score = 23.0 bits (47), Expect = 0.80
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = -2
Query: 314 KDLSFYFQIIYTIV 273
+DLS YF +IY+++
Sbjct: 17 RDLSLYFSVIYSLL 30
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 22.2 bits (45), Expect = 1.4
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +3
Query: 219 KTFCCGVQNSSPTKHDHLNNCVYY 290
KT C G + SP + + ++ VY+
Sbjct: 302 KTLCNGSKGISPEQEELIHRLVYF 325
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 21.0 bits (42), Expect = 3.2
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 239 NSAAKGFQGSCMS*IVTKIG 180
NSA +GF G+ + +V K G
Sbjct: 94 NSADEGFDGTFQTNVVVKHG 113
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 21.0 bits (42), Expect = 3.2
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 239 NSAAKGFQGSCMS*IVTKIG 180
NSA +GF G+ + +V K G
Sbjct: 94 NSADEGFDGTFQTNVVVKHG 113
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 21.0 bits (42), Expect = 3.2
Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -2
Query: 239 NSAAKGFQGSCMS*IVTK-IGECFSV 165
NSA +GF G+ + +V K G C V
Sbjct: 94 NSADEGFDGTFQTNVVVKHNGSCLYV 119
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.0 bits (42), Expect = 3.2
Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -2
Query: 239 NSAAKGFQGSCMS*IVTK-IGECFSV 165
NSA +GF G+ + +V K G C V
Sbjct: 94 NSADEGFDGTFQTNVVVKHNGSCLYV 119
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 21.0 bits (42), Expect = 3.2
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 239 NSAAKGFQGSCMS*IVTKIG 180
NSA +GF G+ + +V K G
Sbjct: 94 NSADEGFDGTFQTNVVVKHG 113
>AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane
transporter protein.
Length = 669
Score = 21.0 bits (42), Expect = 3.2
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +3
Query: 108 YFDYVKRLQSLLKSHHFRNDAKTLAYFGYYLTHTGT 215
+F+ +KR S ++ H + +AY G L G+
Sbjct: 77 FFNLIKRKDSPVQKKHILKNVFGVAYPGELLAILGS 112
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 21.0 bits (42), Expect = 3.2
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +3
Query: 108 YFDYVKRLQSLLKSHHFRNDAKTLAYFGYYLTHTGT 215
+F+ +KR S ++ H + +AY G L G+
Sbjct: 77 FFNLIKRKDSPVQKKHILKNVFGVAYPGELLAILGS 112
>DQ855499-1|ABH88186.1| 124|Tribolium castaneum chemosensory
protein 13 protein.
Length = 124
Score = 19.8 bits (39), Expect = 7.5
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3
Query: 27 ACDSVLKREHTN 62
AC +VL E+TN
Sbjct: 11 ACTNVLSEEYTN 22
>AM292381-1|CAL23193.2| 364|Tribolium castaneum gustatory receptor
candidate 60 protein.
Length = 364
Score = 19.4 bits (38), Expect = 9.9
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = +2
Query: 173 NTRLFWL 193
NT+LFWL
Sbjct: 357 NTKLFWL 363
>AJ829922-1|CAH25640.1| 193|Tribolium castaneum twist bHLH
transcription factor protein.
Length = 193
Score = 19.4 bits (38), Expect = 9.9
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1
Query: 225 RFSGFLYELNSNQN 184
R+ FLY + SN+N
Sbjct: 142 RYIDFLYHVLSNEN 155
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,087
Number of Sequences: 336
Number of extensions: 1437
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used: 6155018
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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