Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8g05
(749 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 112 3e-25
SB_52455| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.081
SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0) 33 0.19
SB_12442| Best HMM Match : zf-MYND (HMM E-Value=0.0028) 32 0.43
SB_58297| Best HMM Match : DUF630 (HMM E-Value=6.3) 31 1.00
SB_5869| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_31490| Best HMM Match : Aa_trans (HMM E-Value=4.9e-31) 29 5.3
SB_21400| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_41626| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_41312| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_52226| Best HMM Match : Cytadhesin_P30 (HMM E-Value=9) 28 9.3
SB_46241| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_42274| Best HMM Match : Cytadhesin_P30 (HMM E-Value=2.3) 28 9.3
SB_15128| Best HMM Match : Lipase_GDSL (HMM E-Value=0.023) 28 9.3
SB_8718| Best HMM Match : Lipase_GDSL (HMM E-Value=0.023) 28 9.3
SB_54| Best HMM Match : Actin (HMM E-Value=0) 28 9.3
SB_50891| Best HMM Match : CsbD (HMM E-Value=3.4) 28 9.3
SB_40728| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_38811| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_30697| Best HMM Match : Cytadhesin_P30 (HMM E-Value=2.3) 28 9.3
SB_30075| Best HMM Match : zf-CHC2 (HMM E-Value=5.4) 28 9.3
SB_25952| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_24804| Best HMM Match : NDUF_B7 (HMM E-Value=4.5) 28 9.3
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 112 bits (269), Expect = 3e-25
Identities = 57/125 (45%), Positives = 79/125 (63%), Gaps = 2/125 (1%)
Frame = +2
Query: 380 KLELARRLASRINLAKGLGADQKGATQQAAEAILKGAPSQTLITAKTVAEQLAAKLNTRL 559
K LA +A++IN G + TQQAA I+KG + T +T +A+QLA K++T+L
Sbjct: 360 KFNLASSIAAKINQKISAGTNNLDPTQQAASQIIKGG-TVTALTGLDLAKQLAQKVHTKL 418
Query: 560 NYQPRDDNTNEPTEEV--FRKYETELEINDFPQQARWRVTSKEALALISEYSEAGITVRG 733
NY+ + E EE +YE E+EIN+FPQ ARW++TSKE + I+EYSE +TVRG
Sbjct: 419 NYEGPQEEVKEKEEEKQEAERYEDEVEINEFPQTARWKITSKETIMTITEYSECAVTVRG 478
Query: 734 TYVQP 748
TY P
Sbjct: 479 TYFPP 483
>SB_52455| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 229
Score = 34.7 bits (76), Expect = 0.081
Identities = 22/71 (30%), Positives = 28/71 (39%)
Frame = +1
Query: 421 RQGTRRRPEGRHATSRRGDPQGRAFADTHHG*NSGGTAGREVEHATQLPAARRQHKRTDR 600
R TRRRPE R R+ D + R D G G + + PA R ++ DR
Sbjct: 46 RTATRRRPERRDERPRKLDDKPRELLDRDSGRAGSGEKREDKHRRLEKPAQRERNDPRDR 105
Query: 601 GGVPQVRDRAG 633
RD G
Sbjct: 106 DSRELNRDSHG 116
>SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0)
Length = 1467
Score = 33.5 bits (73), Expect = 0.19
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = -3
Query: 156 PLNPPPVCTFFPSFSCASLYFSHR---FFSSAGGLTPASSKALSTSPAYRPCS 7
P++P P + PS + AS +S F S+ ++PAS TSP Y P S
Sbjct: 392 PVSPGPTSPYIPSPAAASPGYSPSSPAFMPSSPSMSPASPSYSPTSPGYSPSS 444
Score = 27.9 bits (59), Expect = 9.3
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = -3
Query: 195 AAWASDSSNLKPFPLNPPPVCTFFPSFSCASLYFSHRFFSSAGGLTPASSKALSTSPAYR 16
AA S + F + P + PS+S S +S S + G +PAS TSP+Y
Sbjct: 407 AASPGYSPSSPAFMPSSPSMSPASPSYSPTSPGYSPS--SPSSGYSPASPSYSPTSPSYS 464
Query: 15 PCS 7
P S
Sbjct: 465 PTS 467
>SB_12442| Best HMM Match : zf-MYND (HMM E-Value=0.0028)
Length = 3809
Score = 32.3 bits (70), Expect = 0.43
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = +1
Query: 418 PRQGTRRRPEGRHATSRRGDPQGRAFADTHHG*NSGGTAGREVEHATQLPAARRQHKRTD 597
PR+GT R R+ GD +G + G + GT G E +T P + R H++ +
Sbjct: 2871 PRRGTYERERNRNRDRYDGDEKGDSVQSNRDGNHDRGTHG---ERSTD-PTSLRHHRKQE 2926
Query: 598 RGGV 609
+ G+
Sbjct: 2927 QTGM 2930
>SB_58297| Best HMM Match : DUF630 (HMM E-Value=6.3)
Length = 194
Score = 31.1 bits (67), Expect = 1.00
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +2
Query: 596 TEEVFRKYETELEINDFPQQARWR 667
TEEVF K ETELE+ + QQ +W+
Sbjct: 5 TEEVFEK-ETELEVENKKQQEKWK 27
>SB_5869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1017
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 557 LNYQPRDDNTNEPTEEVFRKYETE 628
LN P + N N+PTE +FR+ E E
Sbjct: 747 LNATPIESNQNKPTETIFREQENE 770
>SB_31490| Best HMM Match : Aa_trans (HMM E-Value=4.9e-31)
Length = 974
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -3
Query: 732 PRTVIPASEYSLIRASASLLVTLHLACCGKSLISSSVSYL 613
PRTV P SE L R + LV + C GK S V+++
Sbjct: 222 PRTVSPFSEPHLHRTISQTLVKVQEYCQGKQSCSFKVNHI 261
>SB_21400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1531
Score = 28.7 bits (61), Expect = 5.3
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = +2
Query: 470 EAILKGAPSQTLITAKTVAEQLAAKLNTRLNYQPR----DDNTNEPTEEVFRKYETELEI 637
EAILK Q+ + + E L+ +YQ + ++ E EE+ Y ++I
Sbjct: 67 EAILKSLRKQSEEKERQLRENLSQSQKDNFSYQSKTSSLENEIQELKEEISPCYHLHVDI 126
Query: 638 NDFPQQ 655
+ +PQQ
Sbjct: 127 SFYPQQ 132
>SB_41626| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 753
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 198 EAAWASDSSNLKPFPLNPPPVCTFFPS 118
+ +W D + L P PL P CT FP+
Sbjct: 133 QVSWYKDGTPLTPKPLGPRRNCTSFPT 159
>SB_41312| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 357
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +1
Query: 409 PHQPR--QGTRRRPEGRHATSRRGDPQGRAFADTHHG*NSGGTAG 537
PH PR + R+RP AT+++G +GR G GG G
Sbjct: 124 PHPPRGRKRKRKRPTASTATTKQGSVRGRGGGRGGGGGGCGGGGG 168
>SB_52226| Best HMM Match : Cytadhesin_P30 (HMM E-Value=9)
Length = 264
Score = 27.9 bits (59), Expect = 9.3
Identities = 24/89 (26%), Positives = 33/89 (37%)
Frame = +1
Query: 463 SRRGDPQGRAFADTHHG*NSGGTAGREVEHATQLPAARRQHKRTDRGGVPQVRDRAGDQ* 642
SR GD + D H N GT +Q+P RRQ RD A +
Sbjct: 95 SRNGDIDESVYRDNVHLNNQTGTKKLVASLKSQIPGLRRQ------------RDPAVTRK 142
Query: 643 LPAAGQVEGH*QGGASSNQRVLRGRYNGP 729
P + + QG S + + + RY P
Sbjct: 143 FPVNNRFQQRRQGAPSGSTGIPQARYQAP 171
>SB_46241| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 27.9 bits (59), Expect = 9.3
Identities = 24/89 (26%), Positives = 33/89 (37%)
Frame = +1
Query: 463 SRRGDPQGRAFADTHHG*NSGGTAGREVEHATQLPAARRQHKRTDRGGVPQVRDRAGDQ* 642
SR GD + D H N GT +Q+P RRQ RD A +
Sbjct: 95 SRNGDIDESVYRDNVHLNNQTGTKKLVASLKSQIPGLRRQ------------RDPAVTRK 142
Query: 643 LPAAGQVEGH*QGGASSNQRVLRGRYNGP 729
P + + QG S + + + RY P
Sbjct: 143 FPVNNRFQQRRQGAPSGSTGIPQARYQAP 171
>SB_42274| Best HMM Match : Cytadhesin_P30 (HMM E-Value=2.3)
Length = 239
Score = 27.9 bits (59), Expect = 9.3
Identities = 24/89 (26%), Positives = 33/89 (37%)
Frame = +1
Query: 463 SRRGDPQGRAFADTHHG*NSGGTAGREVEHATQLPAARRQHKRTDRGGVPQVRDRAGDQ* 642
SR GD + D H N GT +Q+P RRQ RD A +
Sbjct: 95 SRNGDIDESVYRDNVHLNNQTGTKKLVASLKSQIPGLRRQ------------RDPAVTRK 142
Query: 643 LPAAGQVEGH*QGGASSNQRVLRGRYNGP 729
P + + QG S + + + RY P
Sbjct: 143 FPVNNRFQQRRQGAPSGSTGIPQARYQAP 171
>SB_15128| Best HMM Match : Lipase_GDSL (HMM E-Value=0.023)
Length = 346
Score = 27.9 bits (59), Expect = 9.3
Identities = 24/89 (26%), Positives = 33/89 (37%)
Frame = +1
Query: 463 SRRGDPQGRAFADTHHG*NSGGTAGREVEHATQLPAARRQHKRTDRGGVPQVRDRAGDQ* 642
SR GD + D H N GT +Q+P RRQ RD A +
Sbjct: 208 SRNGDIDESVYRDNVHLNNQTGTKKLVASLKSQIPGLRRQ------------RDPAVTRK 255
Query: 643 LPAAGQVEGH*QGGASSNQRVLRGRYNGP 729
P + + QG S + + + RY P
Sbjct: 256 FPVNNRFQQRRQGAPSGSTGIPQARYQAP 284
>SB_8718| Best HMM Match : Lipase_GDSL (HMM E-Value=0.023)
Length = 836
Score = 27.9 bits (59), Expect = 9.3
Identities = 24/89 (26%), Positives = 33/89 (37%)
Frame = +1
Query: 463 SRRGDPQGRAFADTHHG*NSGGTAGREVEHATQLPAARRQHKRTDRGGVPQVRDRAGDQ* 642
SR GD + D H N GT +Q+P RRQ RD A +
Sbjct: 188 SRNGDIDESVYRDNVHLNNQTGTKKLVASLKSQIPGLRRQ------------RDPAVTRK 235
Query: 643 LPAAGQVEGH*QGGASSNQRVLRGRYNGP 729
P + + QG S + + + RY P
Sbjct: 236 FPVNNRFQQRRQGAPSGSTGIPQARYQAP 264
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 548 NTRLNYQPRDDNTNEPTEEVFRKYETELEINDFPQQ 655
+TR Q DD+T + +E+ E E+++ND Q+
Sbjct: 1754 DTRKEVQEIDDDTKKEFQEIGNDMEKEVQVNDDAQK 1789
>SB_50891| Best HMM Match : CsbD (HMM E-Value=3.4)
Length = 311
Score = 27.9 bits (59), Expect = 9.3
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Frame = +2
Query: 377 GKLELARRLASRINLAKGLGADQKGATQQAAEAILKGAPSQTLITAKTVAEQLAAKLNTR 556
G +E +R + KG KGAT+Q EAI +G K EQ +LN
Sbjct: 125 GSIEQGKRATEQ---GKGATEQGKGATEQGKEAIEQG---------KEACEQERERLNKE 172
Query: 557 LNYQPRD-DNTNEPTEEVFRKYE 622
+D + N+ TE V ++ E
Sbjct: 173 RKRANKDTERVNKETERVNKETE 195
>SB_40728| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1317
Score = 27.9 bits (59), Expect = 9.3
Identities = 24/89 (26%), Positives = 33/89 (37%)
Frame = +1
Query: 463 SRRGDPQGRAFADTHHG*NSGGTAGREVEHATQLPAARRQHKRTDRGGVPQVRDRAGDQ* 642
SR GD + D H N GT +Q+P RRQ RD A +
Sbjct: 505 SRNGDIDESVYRDNVHLNNQTGTKKLVASLKSQIPGLRRQ------------RDPAVTRK 552
Query: 643 LPAAGQVEGH*QGGASSNQRVLRGRYNGP 729
P + + QG S + + + RY P
Sbjct: 553 FPVNNRFQQRRQGAPSGSTGIPQARYQAP 581
>SB_38811| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 787
Score = 27.9 bits (59), Expect = 9.3
Identities = 24/89 (26%), Positives = 33/89 (37%)
Frame = +1
Query: 463 SRRGDPQGRAFADTHHG*NSGGTAGREVEHATQLPAARRQHKRTDRGGVPQVRDRAGDQ* 642
SR GD + D H N GT +Q+P RRQ RD A +
Sbjct: 400 SRNGDIDESVYRDNVHLNNQTGTKKLVASLKSQIPGLRRQ------------RDPAVTRK 447
Query: 643 LPAAGQVEGH*QGGASSNQRVLRGRYNGP 729
P + + QG S + + + RY P
Sbjct: 448 FPVNNRFQQRRQGAPSGSTGIPQARYQAP 476
>SB_30697| Best HMM Match : Cytadhesin_P30 (HMM E-Value=2.3)
Length = 239
Score = 27.9 bits (59), Expect = 9.3
Identities = 24/89 (26%), Positives = 33/89 (37%)
Frame = +1
Query: 463 SRRGDPQGRAFADTHHG*NSGGTAGREVEHATQLPAARRQHKRTDRGGVPQVRDRAGDQ* 642
SR GD + D H N GT +Q+P RRQ RD A +
Sbjct: 95 SRNGDIDESVYRDNVHLNNQTGTKKLVASLKSQIPGLRRQ------------RDPAVTRK 142
Query: 643 LPAAGQVEGH*QGGASSNQRVLRGRYNGP 729
P + + QG S + + + RY P
Sbjct: 143 FPVNNRFQQRRQGAPSGSTGIPQARYQAP 171
>SB_30075| Best HMM Match : zf-CHC2 (HMM E-Value=5.4)
Length = 335
Score = 27.9 bits (59), Expect = 9.3
Identities = 24/89 (26%), Positives = 33/89 (37%)
Frame = +1
Query: 463 SRRGDPQGRAFADTHHG*NSGGTAGREVEHATQLPAARRQHKRTDRGGVPQVRDRAGDQ* 642
SR GD + D H N GT +Q+P RRQ RD A +
Sbjct: 191 SRNGDIDESVYRDNVHLNNQTGTKKLVASLKSQIPGLRRQ------------RDPAVTRK 238
Query: 643 LPAAGQVEGH*QGGASSNQRVLRGRYNGP 729
P + + QG S + + + RY P
Sbjct: 239 FPVNNRFQQRRQGAPSGSTGIPQARYQAP 267
>SB_25952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -3
Query: 147 PPPVCTFFPSFSCASLYFSHRFFSSAGGLTPASSKALSTS 28
P P T PS++C + Y S ++ TP +S +TS
Sbjct: 94 PTPSYTPTPSYTCTTSYTSTTSYTPTTSYTPTTSYTCTTS 133
>SB_24804| Best HMM Match : NDUF_B7 (HMM E-Value=4.5)
Length = 235
Score = 27.9 bits (59), Expect = 9.3
Identities = 24/89 (26%), Positives = 33/89 (37%)
Frame = +1
Query: 463 SRRGDPQGRAFADTHHG*NSGGTAGREVEHATQLPAARRQHKRTDRGGVPQVRDRAGDQ* 642
SR GD + D H N GT +Q+P RRQ RD A +
Sbjct: 16 SRNGDIDESVYRDNVHLNNQTGTKKLVASLKSQIPGLRRQ------------RDPAVTRK 63
Query: 643 LPAAGQVEGH*QGGASSNQRVLRGRYNGP 729
P + + QG S + + + RY P
Sbjct: 64 FPVNNRFQQRRQGAPSGSTGIPQARYQAP 92
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,179,520
Number of Sequences: 59808
Number of extensions: 355943
Number of successful extensions: 1173
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1167
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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