Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8g05
(749 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 111 4e-25
Z81593-12|CAB04744.1| 1274|Caenorhabditis elegans Hypothetical p... 33 0.29
AL023822-2|CAA19440.1| 1274|Caenorhabditis elegans Hypothetical ... 33 0.29
Z78064-6|CAK12565.1| 225|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z73896-4|CAA98057.2| 503|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z81495-6|CAB04062.1| 164|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z68104-8|CAA92117.1| 1077|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z66563-4|CAA91470.1| 1077|Caenorhabditis elegans Hypothetical pr... 28 8.1
AF435953-1|AAL30829.1| 1077|Caenorhabditis elegans eIF2 alpha ki... 28 8.1
AF193341-1|AAF61201.1| 1077|Caenorhabditis elegans eukaryotic tr... 28 8.1
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 111 bits (268), Expect = 4e-25
Identities = 79/260 (30%), Positives = 129/260 (49%), Gaps = 12/260 (4%)
Frame = +2
Query: 5 PE-QGRYAGDVLRAFELAGVSPPAELKNLWEKYKEAQEKDGKKVHTXXXXXXXXXXX-DE 178
PE Q + AG++ RAFE AG PPA+LK ++E++K +GK+V DE
Sbjct: 658 PEHQEKMAGEICRAFETAGCKPPADLKAMFERFKSEMAAEGKEVKLGGKGFEGSGYKYDE 717
Query: 179 SEAQAASEKKKYQKAALGXXXXXXXXXXXXXXXXIETMLAAKKIV--------KEIKXXX 334
EA+A + KK+ + G + +M+ K+ V K
Sbjct: 718 GEAEADANKKRMTRLVHGMEAGGDDDDDLEEQ--LSSMIKTKRRVVHGKPQSEKPSSSSG 775
Query: 335 XXXXXXXXXXXXTDGKLELARRLASRINLAKGLGAD-QKGATQQAAEAILKGAP-SQTLI 508
KL+ A L++R+ A + +K A Q AEA+L+GA + +
Sbjct: 776 NAKNDREAGKRADQAKLK-AEELSTRLKGASQVVQPVEKTAAQLTAEAVLRGAEVAPAQM 834
Query: 509 TAKTVAEQLAAKLNTRLNYQPRDDNTNEPTEEVFRKYETELEINDFPQQARWRVTSKEAL 688
+A +A++ A +LN +LNY + + EE + +E E +INDFPQQ R+++ S+E++
Sbjct: 835 SAAMLAKEKANRLNEKLNYLGGEAAPTQQQEEAWEYFEEEWDINDFPQQVRYKICSRESV 894
Query: 689 ALISEYSEAGITVRGTYVQP 748
++E +E GI+VRG +V P
Sbjct: 895 GHVAELAEVGISVRGVHVPP 914
>Z81593-12|CAB04744.1| 1274|Caenorhabditis elegans Hypothetical
protein Y102A5A.1 protein.
Length = 1274
Score = 32.7 bits (71), Expect = 0.29
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Frame = +2
Query: 440 DQKGATQQAAEAILKGAPSQTLITAKTVAEQLAAKLNTRLNYQPRDDNTNEPTEEVFRKY 619
D + A+ Q E L P + + K V +QL L NY+ DD+ +E E+ +
Sbjct: 282 DLREASIQGLEVFLYRNPQEVVAFEKEVIQQLTDALAYDPNYEYGDDDEDEQMED--DED 339
Query: 620 ETELEINDFPQQARWRV---TSKEALALISEYSEA 715
+ E E +D + W+V +K A+IS + E+
Sbjct: 340 DDEDEYSD-DEDVTWKVRRAAAKAIEAMISSHRES 373
>AL023822-2|CAA19440.1| 1274|Caenorhabditis elegans Hypothetical
protein Y102A5A.1 protein.
Length = 1274
Score = 32.7 bits (71), Expect = 0.29
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Frame = +2
Query: 440 DQKGATQQAAEAILKGAPSQTLITAKTVAEQLAAKLNTRLNYQPRDDNTNEPTEEVFRKY 619
D + A+ Q E L P + + K V +QL L NY+ DD+ +E E+ +
Sbjct: 282 DLREASIQGLEVFLYRNPQEVVAFEKEVIQQLTDALAYDPNYEYGDDDEDEQMED--DED 339
Query: 620 ETELEINDFPQQARWRV---TSKEALALISEYSEA 715
+ E E +D + W+V +K A+IS + E+
Sbjct: 340 DDEDEYSD-DEDVTWKVRRAAAKAIEAMISSHRES 373
>Z78064-6|CAK12565.1| 225|Caenorhabditis elegans Hypothetical
protein F57B1.6a protein.
Length = 225
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -3
Query: 693 RASASLLVTLHLACCGKSLISSSVSYLRNTSSVGSFVLSSR 571
RA ++ + + CC +L+ S+S L TSSV F++ SR
Sbjct: 26 RAGGAMQTSTFIFCCNIALVIVSISGLCLTSSVFDFIVVSR 66
>Z73896-4|CAA98057.2| 503|Caenorhabditis elegans Hypothetical
protein F09E8.6 protein.
Length = 503
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 336 PCPVPPRLLLARRTESWS*RGGSRPASTSPRDSAQTRRAPRNK 464
P PVP ++ S + RG S ST+P+ + T AP+ K
Sbjct: 426 PKPVPRNKEKENKSASSTTRGTSTATSTTPKTTTTTTSAPKEK 468
>Z81495-6|CAB04062.1| 164|Caenorhabditis elegans Hypothetical
protein F08G2.6 protein.
Length = 164
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -3
Query: 156 PLNPPPVCTFFPSFSCASLYFSHRFFSSAGGLTPASS 46
P++P P F P SC S + HR F + G SS
Sbjct: 22 PIHPVPNAAFLPYRSCGS-HLVHRAFEACSGKKDRSS 57
>Z68104-8|CAA92117.1| 1077|Caenorhabditis elegans Hypothetical
protein F46C3.1 protein.
Length = 1077
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/81 (24%), Positives = 36/81 (44%)
Frame = -3
Query: 642 SLISSSVSYLRNTSSVGSFVLSSRGW*LSRVFNFAASCSATVLAVMSVCEGAPLRIASAA 463
+L+ + SY+ N ++V SF+ G ++ V+N A S ++ +S E A AS
Sbjct: 445 TLMQTIFSYIFNPTAVVSFLAGLIGVTVAVVYNKIAKSSPRMIEHLSSTESAETESASHR 504
Query: 462 CCVAPFWSAPSPLARLMRDAS 400
F + R + + S
Sbjct: 505 TRTTSFAPTDDEIERFVEEGS 525
>Z66563-4|CAA91470.1| 1077|Caenorhabditis elegans Hypothetical
protein F46C3.1 protein.
Length = 1077
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/81 (24%), Positives = 36/81 (44%)
Frame = -3
Query: 642 SLISSSVSYLRNTSSVGSFVLSSRGW*LSRVFNFAASCSATVLAVMSVCEGAPLRIASAA 463
+L+ + SY+ N ++V SF+ G ++ V+N A S ++ +S E A AS
Sbjct: 445 TLMQTIFSYIFNPTAVVSFLAGLIGVTVAVVYNKIAKSSPRMIEHLSSTESAETESASHR 504
Query: 462 CCVAPFWSAPSPLARLMRDAS 400
F + R + + S
Sbjct: 505 TRTTSFAPTDDEIERFVEEGS 525
>AF435953-1|AAL30829.1| 1077|Caenorhabditis elegans eIF2 alpha
kinase protein.
Length = 1077
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/81 (24%), Positives = 36/81 (44%)
Frame = -3
Query: 642 SLISSSVSYLRNTSSVGSFVLSSRGW*LSRVFNFAASCSATVLAVMSVCEGAPLRIASAA 463
+L+ + SY+ N ++V SF+ G ++ V+N A S ++ +S E A AS
Sbjct: 445 TLMQTIFSYIFNPTAVVSFLAGLIGVTVAVVYNKIAKSSPRMIEHLSSTESAETESASHR 504
Query: 462 CCVAPFWSAPSPLARLMRDAS 400
F + R + + S
Sbjct: 505 TRTTSFAPTDDEIERFVEEGS 525
>AF193341-1|AAF61201.1| 1077|Caenorhabditis elegans eukaryotic
translation initiationfactor 2 alpha kinase PEK protein.
Length = 1077
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/81 (24%), Positives = 36/81 (44%)
Frame = -3
Query: 642 SLISSSVSYLRNTSSVGSFVLSSRGW*LSRVFNFAASCSATVLAVMSVCEGAPLRIASAA 463
+L+ + SY+ N ++V SF+ G ++ V+N A S ++ +S E A AS
Sbjct: 445 TLMQTIFSYIFNPTAVVSFLAGLIGVTVAVVYNKIAKSSPRMIEHLSSTESAETESASHR 504
Query: 462 CCVAPFWSAPSPLARLMRDAS 400
F + R + + S
Sbjct: 505 TRTTSFAPTDDEIERFVEEGS 525
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,630,831
Number of Sequences: 27780
Number of extensions: 254566
Number of successful extensions: 965
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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