Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8f19
(671 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase su... 212 2e-55
AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical ... 64 9e-11
AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical ... 64 9e-11
U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpa... 44 7e-05
AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical ... 44 1e-04
AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily a... 40 0.001
AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical ... 32 0.43
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 31 0.99
U42830-4|AAC48277.1| 487|Caenorhabditis elegans Neuronal igcam ... 29 2.3
AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical ... 29 2.3
AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical ... 29 2.3
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 29 4.0
Z68003-2|CAA91976.2| 560|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z54342-1|CAA91143.1| 505|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z48638-10|CAA88566.1| 118|Caenorhabditis elegans Hypothetical p... 28 6.9
U41533-13|AAA83174.3| 955|Caenorhabditis elegans Hypothetical p... 28 6.9
Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical pr... 27 9.2
AF040649-6|AAB95006.1| 1360|Caenorhabditis elegans Hypothetical ... 27 9.2
AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical ... 27 9.2
AF016415-3|AAW88418.1| 658|Caenorhabditis elegans Hypothetical ... 27 9.2
AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical ... 27 9.2
AC006770-1|AAF60594.1| 1365|Caenorhabditis elegans Hypothetical ... 27 9.2
>U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase
subunit protein 2 protein.
Length = 538
Score = 212 bits (518), Expect = 2e-55
Identities = 110/183 (60%), Positives = 126/183 (68%), Gaps = 5/183 (2%)
Frame = +1
Query: 136 CRVGRLATKTVVNNATEKASLVTGAAVNKRDYAAKASXXXXXXXXXXXXXXXXXX----- 300
C + + + NN K + TG A + A K S
Sbjct: 24 CALPAASIRLSSNNVESKKGIHTGVATQQAAAATKVSAKATAANASGRIVAVIGAVVDVQ 83
Query: 301 FEDNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPVLDSGSPIRI 480
F++NLPPILN LEV RSPRL+LEV+QHLG+N VR IAMDGTEGLVRGQPV D+G PI+I
Sbjct: 84 FDENLPPILNGLEVVGRSPRLILEVSQHLGDNVVRCIAMDGTEGLVRGQPVADTGDPIKI 143
Query: 481 PVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVDLLA 660
PVG ETLGRI+NVIGEPIDERGPI + AAIHAEAPEFV+MSV+QEILVTGIKVVDLLA
Sbjct: 144 PVGPETLGRIMNVIGEPIDERGPIASKNFAAIHAEAPEFVEMSVEQEILVTGIKVVDLLA 203
Query: 661 PYA 669
PYA
Sbjct: 204 PYA 206
>AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical
protein H28O16.1d protein.
Length = 511
Score = 64.1 bits (149), Expect = 9e-11
Identities = 30/97 (30%), Positives = 53/97 (54%)
Frame = +1
Query: 373 VAQHLGENTVRTIAMDGTEGLVRGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGPI 552
+A +L + V + + + G V +G+ + +PVG LGR+++ +G PID +GPI
Sbjct: 63 MAMNLDVDNVGVVVFGNDKVIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPI 122
Query: 553 PTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAP 663
+ + + +AP + +E +VTG+K VD L P
Sbjct: 123 ANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVP 159
>AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical
protein H28O16.1a protein.
Length = 538
Score = 64.1 bits (149), Expect = 9e-11
Identities = 30/97 (30%), Positives = 53/97 (54%)
Frame = +1
Query: 373 VAQHLGENTVRTIAMDGTEGLVRGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGPI 552
+A +L + V + + + G V +G+ + +PVG LGR+++ +G PID +GPI
Sbjct: 90 MAMNLDVDNVGVVVFGNDKVIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPI 149
Query: 553 PTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAP 663
+ + + +AP + +E +VTG+K VD L P
Sbjct: 150 ANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVP 186
>U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpase
protein 12 protein.
Length = 491
Score = 44.4 bits (100), Expect = 7e-05
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Frame = +1
Query: 385 LGENTVRTIAMDGTEGLVRGQPVLD-SGSPIRIPVGAETLGRIINVIGEPIDERGPIPTD 561
+ +N +GT G+ + + +G +R PV + LGRI N G+PID+ P+ +
Sbjct: 71 ISKNKAVVQVFEGTSGIDAKNTICEFTGDILRTPVSEDMLGRIFNGSGKPIDKGPPVLAE 130
Query: 562 KTAAIHAEAPEFVDMSVQQEILVTGIKVVDLL 657
I+ + +E++ TGI +D++
Sbjct: 131 DFLDINGQPINPWSRIYPEEMIQTGISAIDVM 162
>AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical
protein H28O16.1c protein.
Length = 503
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/49 (38%), Positives = 29/49 (59%)
Frame = +1
Query: 517 VIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAP 663
V+G PID +GPI + + + +AP + +E +VTG+K VD L P
Sbjct: 103 VLGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVP 151
>AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily
assigned gene nameprotein 300 protein.
Length = 501
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = +1
Query: 460 SGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGI 639
+G R PV + LGRI N G+PID+ P+ + I+ + + +E++ TGI
Sbjct: 109 TGDIFRSPVSLDMLGRIFNGSGKPIDKGPPVLPEDYLDINGQPINPFNRIYPEEMIQTGI 168
Query: 640 KVVDLL 657
+D++
Sbjct: 169 SAIDVM 174
>AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical
protein Y49A3A.2 protein.
Length = 606
Score = 31.9 bits (69), Expect = 0.43
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 424 TEGLVRGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDE 540
T G+ G PVL +G P+ + +G +G I + I P+ +
Sbjct: 59 TSGVTIGDPVLRTGKPLSVELGPGIMGSIFDGIQRPLKD 97
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 30.7 bits (66), Expect = 0.99
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Frame = -1
Query: 644 TFIPVTRISCCTDMSTNSGASAWIAAVLSVGMGPRS-SIGSPITL-MMRPRV---SAPTG 480
TF PVT +S + +T + + + P + + +P T+ M P + P
Sbjct: 468 TFYPVTTVSTMSPPTTVTVPTTPTPVPTTTNTPPANPTTATPTTVGTMTPSTGTTTVPVP 527
Query: 479 IRMGEPESSTGCPRTKPSVPS 417
G P + T P TKP+VPS
Sbjct: 528 TTTGSPTTQTTAPVTKPTVPS 548
>U42830-4|AAC48277.1| 487|Caenorhabditis elegans Neuronal igcam
protein 3 protein.
Length = 487
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 418 DGTEGLVRGQPV-LDSGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPE 594
D +G + G+P+ +D G ++ P G E + ++ N GEP+DE A I + E
Sbjct: 152 DTVKGALLGEPITIDCG--VKGPSGKEPMIQMTNGNGEPLDEEIWTIAGNEATIDSLKKE 209
Query: 595 FVDMSV 612
+++V
Sbjct: 210 HAELTV 215
>AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical
protein Y59A8B.9 protein.
Length = 187
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/73 (26%), Positives = 27/73 (36%)
Frame = -1
Query: 605 MSTNSGASAWIAAVLSVGMGPRSSIGSPITLMMRPRVSAPTGIRMGEPESSTGCPRTKPS 426
+ T G +A +A M RS P+T M P + P S+ PR
Sbjct: 9 LPTEGGPAAGASAKTPSRMPARSVPQKPVTTMRTPAATPAAPPTRPTPSRSSAAPRATAP 68
Query: 425 VPSMAMVRTVFSP 387
P+ A +T P
Sbjct: 69 TPTAAPPKTCAPP 81
>AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical
protein Y59A8B.7 protein.
Length = 316
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/73 (26%), Positives = 27/73 (36%)
Frame = -1
Query: 605 MSTNSGASAWIAAVLSVGMGPRSSIGSPITLMMRPRVSAPTGIRMGEPESSTGCPRTKPS 426
+ T G +A +A M RS P+T M P + P S+ PR
Sbjct: 138 LPTEGGPAAGASAKTPSRMPARSVPQKPVTTMRTPAATPAAPPTRPTPSRSSAAPRATAP 197
Query: 425 VPSMAMVRTVFSP 387
P+ A +T P
Sbjct: 198 TPTAAPPKTCAPP 210
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
F25H8.3 protein.
Length = 2165
Score = 28.7 bits (61), Expect = 4.0
Identities = 24/84 (28%), Positives = 32/84 (38%)
Frame = +3
Query: 192 ITGDWSRCEQT*LCSQGFRQRAR*GSCRYWCRSGCSV*RQLAADPKCP*GAKSISPXXXX 371
I GDWS+C + C G+R+R+ SC S C R+ KC + P
Sbjct: 1494 IIGDWSKCSAS--CGGGWRRRS--VSC---TSSSCDETRKPKMFDKC--NEELCPPLTNN 1544
Query: 372 XXXXXXREHCTYHCHGRY*RLSPW 443
HC+ C G R W
Sbjct: 1545 SWQISPWTHCSVSCGGGVQRRKIW 1568
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 28.7 bits (61), Expect = 4.0
Identities = 24/84 (28%), Positives = 32/84 (38%)
Frame = +3
Query: 192 ITGDWSRCEQT*LCSQGFRQRAR*GSCRYWCRSGCSV*RQLAADPKCP*GAKSISPXXXX 371
I GDWS+C + C G+R+R+ SC S C R+ KC + P
Sbjct: 1494 IIGDWSKCSAS--CGGGWRRRS--VSC---TSSSCDETRKPKMFDKC--NEELCPPLTNN 1544
Query: 372 XXXXXXREHCTYHCHGRY*RLSPW 443
HC+ C G R W
Sbjct: 1545 SWQISPWTHCSVSCGGGVQRRKIW 1568
>Z68003-2|CAA91976.2| 560|Caenorhabditis elegans Hypothetical
protein E02H4.2 protein.
Length = 560
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 96 LNFQKYYRNVSYCLQSRPFGYEDSSKQC 179
L QKYY + Y LQS+P +K C
Sbjct: 130 LPHQKYYNSEQYALQSQPCNQYQMNKLC 157
>Z54342-1|CAA91143.1| 505|Caenorhabditis elegans Hypothetical
protein C08H9.1 protein.
Length = 505
Score = 27.9 bits (59), Expect = 6.9
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = -1
Query: 200 TSDAFSVALFTTVFVAKRPTLQTVGNISIIFLKI**KGSKVGSNWLRKSQILYVTIRPVP 21
TS FSV LF +F++ + GN I LK+ N +K + R +P
Sbjct: 4 TSLVFSVLLFDLIFISNCDYIHLPGNSDIPDLKLQSGYLNANENGTQKMFYFLLEARDIP 63
Query: 20 MG 15
+G
Sbjct: 64 VG 65
>Z48638-10|CAA88566.1| 118|Caenorhabditis elegans Hypothetical
protein ZK892.2 protein.
Length = 118
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -3
Query: 117 DNIFENLVERQQSRIELVTKITNSLRNDPSSADGRMR 7
D IFE + ER + E+V K+ S R + ADG+ +
Sbjct: 6 DVIFEEIKERIATDKEMVKKVGTSFRMTIAGADGKTK 42
>U41533-13|AAA83174.3| 955|Caenorhabditis elegans Hypothetical
protein R05F9.12 protein.
Length = 955
Score = 27.9 bits (59), Expect = 6.9
Identities = 23/75 (30%), Positives = 32/75 (42%)
Frame = -3
Query: 237 GCIVTFVHSGSSHQ*CFFSSIVYYCLRSQTAYSADSRKHFDNIFENLVERQQSRIELVTK 58
GCI +G + C+F V Y L SQ + + RK+ N + I+L TK
Sbjct: 39 GCIWKEDDTGKNAPWCYFKDGVGYNLDSQQGSTYNLRKNGGP--SNPWGADSTEIKLTTK 96
Query: 57 ITNSLRNDPSSADGR 13
S+ N DGR
Sbjct: 97 SIGSVLNVKIGIDGR 111
>Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical
protein F25D7.4 protein.
Length = 932
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = -1
Query: 533 IGSPITLMMRPRVSAPTGIRMGEPESSTGCPRTKPSVPSMAMVRTVFS 390
+G P + RP P+ S+TG RT+P+VP+++ R + S
Sbjct: 284 LGIPAPAVPRPVAGKPST----RSASTTGAARTRPAVPAVSAPRALTS 327
>AF040649-6|AAB95006.1| 1360|Caenorhabditis elegans Hypothetical
protein F33H12.6 protein.
Length = 1360
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 611 TDMSTNSGASAWIAAVLSVGMGPRSSIGSPITL 513
++M SG S WI +L+VG G + S +TL
Sbjct: 1098 SNMRVTSGDSDWIQFLLNVGDGSANDSDSKVTL 1130
>AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical
protein ZK250.9 protein.
Length = 1466
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 611 TDMSTNSGASAWIAAVLSVGMGPRSSIGSPITL 513
++M SG S WI +L+VG G + S +TL
Sbjct: 1204 SNMRVTSGDSDWIQFLLNVGDGSANDSDSKVTL 1236
>AF016415-3|AAW88418.1| 658|Caenorhabditis elegans Hypothetical
protein C02A12.8 protein.
Length = 658
Score = 27.5 bits (58), Expect = 9.2
Identities = 23/93 (24%), Positives = 38/93 (40%), Gaps = 3/93 (3%)
Frame = -3
Query: 288 YGTNNGNYLTLPFAGSLGCIVTFVHSGSSHQ*CFFSSIVYYCLRSQTAY---SADSRKHF 118
Y N+GN + S ++ F +S SH +S YY L+ A S DS
Sbjct: 433 YPKNDGNISVMTIGNSY--VMQFTNSIKSHFKQNYSDYWYYSLQEGFALYADSYDSGNAL 490
Query: 117 DNIFENLVERQQSRIELVTKITNSLRNDPSSAD 19
N+ + + + ++ K + SLR + D
Sbjct: 491 KTFKRNVAQHKPDVLFIIAKYSQSLRTSFQAND 523
>AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical
protein Y16E11A.2 protein.
Length = 1466
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 611 TDMSTNSGASAWIAAVLSVGMGPRSSIGSPITL 513
++M SG S WI +L+VG G + S +TL
Sbjct: 1204 SNMRVTSGDSDWIQFLLNVGDGSANDSDSKVTL 1236
>AC006770-1|AAF60594.1| 1365|Caenorhabditis elegans Hypothetical
protein Y46B2A.2 protein.
Length = 1365
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 611 TDMSTNSGASAWIAAVLSVGMGPRSSIGSPITL 513
++M SG S WI +L+VG G + S +TL
Sbjct: 1103 SNMRVTSGDSDWIQFLLNVGDGSANDSDSKVTL 1135
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,131,393
Number of Sequences: 27780
Number of extensions: 356364
Number of successful extensions: 988
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 988
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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