Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8f18
(732 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 25 2.4
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 25 2.4
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal... 24 4.2
DQ230894-1|ABD94313.1| 315|Anopheles gambiae zinc finger protei... 24 5.6
DQ230893-1|ABD94311.1| 315|Anopheles gambiae zinc finger protei... 24 5.6
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 24 5.6
DQ974170-1|ABJ52810.1| 511|Anopheles gambiae serpin 12 protein. 23 7.4
AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled ... 23 7.4
AJ439353-2|CAD27924.1| 612|Anopheles gambiae putative G-protein... 23 7.4
AY347952-1|AAR28375.1| 634|Anopheles gambiae putative sulfakini... 23 9.7
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p... 23 9.7
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 25.0 bits (52), Expect = 2.4
Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Frame = +1
Query: 64 IHLETKMALDSFNNLRRSLCGGCLSSDRKLSETNYEYKHLFGELVGSTNQSAHTSLCWEC 243
I+ E M+ D+ N + SLC L + E N + L+G++ L
Sbjct: 2195 IYTEYLMS-DNMNRAQASLCLEVLKRTGYIDENNLVNRTLYGDMNDDLPFVCGKRLALNH 2253
Query: 244 IKKLKNIRDFKGQ--ARKAQDQLLQLVKDPLF-TLSKLKFS 357
+ K+ + R F Q R D QL+K F L +LK +
Sbjct: 2254 LSKVLSTRSFPYQYGHRYDYDDHDQLIKAKYFHGLEELKLA 2294
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 25.0 bits (52), Expect = 2.4
Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Frame = +1
Query: 64 IHLETKMALDSFNNLRRSLCGGCLSSDRKLSETNYEYKHLFGELVGSTNQSAHTSLCWEC 243
I+ E M+ D+ N + SLC L + E N + L+G++ L
Sbjct: 2205 IYTEYLMS-DNMNRAQASLCLEVLKRTGYIDENNLVNRTLYGDMNDDLPFVCGKRLALNH 2263
Query: 244 IKKLKNIRDFKGQ--ARKAQDQLLQLVKDPLF-TLSKLKFS 357
+ K+ + R F Q R D QL+K F L +LK +
Sbjct: 2264 LSKVLSTRSFPYQYGHRYDYDDHDQLIKAKYFHGLEELKLA 2304
>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
growth factor receptorprotein.
Length = 1433
Score = 24.2 bits (50), Expect = 4.2
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = -2
Query: 428 INLLSFEINLLLRLIANTSMLSVLLNF---NFDKVNNGSLTNWSS 303
+ LL+ + + LI L LL++ N DK+ + +L NWS+
Sbjct: 897 LKLLAVCMTSQMMLITQLMPLGCLLDYVRNNKDKIGSKALLNWST 941
>DQ230894-1|ABD94313.1| 315|Anopheles gambiae zinc finger protein
183 protein.
Length = 315
Score = 23.8 bits (49), Expect = 5.6
Identities = 10/21 (47%), Positives = 15/21 (71%), Gaps = 2/21 (9%)
Frame = +1
Query: 538 HDGDDST--NSKVPVHSNDDE 594
H GDDS ++K +HS+D+E
Sbjct: 222 HGGDDSDGDDTKYEIHSDDEE 242
>DQ230893-1|ABD94311.1| 315|Anopheles gambiae zinc finger protein
183 protein.
Length = 315
Score = 23.8 bits (49), Expect = 5.6
Identities = 10/21 (47%), Positives = 15/21 (71%), Gaps = 2/21 (9%)
Frame = +1
Query: 538 HDGDDST--NSKVPVHSNDDE 594
H GDDS ++K +HS+D+E
Sbjct: 222 HGGDDSDGDDTKYEIHSDDEE 242
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 23.8 bits (49), Expect = 5.6
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = -3
Query: 163 WFLIISYLNSNSLRIMTAVGY*RNPMP 83
W ++ Y+NS+ + I+ +G + P P
Sbjct: 190 WEVLPDYMNSDHIGILITIGKEQTPSP 216
>DQ974170-1|ABJ52810.1| 511|Anopheles gambiae serpin 12 protein.
Length = 511
Score = 23.4 bits (48), Expect = 7.4
Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 1/122 (0%)
Frame = +1
Query: 283 ARKAQDQLLQLVKDPLFTLSKLKFSKT-DNIDVLAIKRNNKLISKDNKLIANKKRALSHH 459
A+K + + ++ D L K KT D+ID + ++ K+ KL + ++ +
Sbjct: 187 AKKKMEAMNEVAADA--DLDDAKMKKTPDSIDRVDHEQPEKMSLSLKKLGLDDEQEVMQ- 243
Query: 460 NGPEITSAFGSVNPDSSFLEINTFDCHDGDDSTNSKVPVHSNDDEGNETKPLAFIKVEYS 639
E + N SFL + G+ K + ++++ NE+K L F + Y
Sbjct: 244 -AVESQGSRRKFNVRRSFLTGDIASALSGNSLVGRKANLKDDEEQVNESKMLLFNGLYYR 302
Query: 640 DS 645
S
Sbjct: 303 GS 304
>AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled
receptor protein.
Length = 611
Score = 23.4 bits (48), Expect = 7.4
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -1
Query: 702 RISTIIRQAFIGKFTQYIFTIRIFYF-DKSKRF 607
RIS +I AF+ +T Y + IF F + ++RF
Sbjct: 416 RISVVIVVAFVVCWTPYYIMMLIFMFLNPTERF 448
>AJ439353-2|CAD27924.1| 612|Anopheles gambiae putative G-protein
coupled receptor protein.
Length = 612
Score = 23.4 bits (48), Expect = 7.4
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -1
Query: 702 RISTIIRQAFIGKFTQYIFTIRIFYF-DKSKRF 607
RIS +I AF+ +T Y + IF F + ++RF
Sbjct: 417 RISVVIVVAFVVCWTPYYIMMLIFMFLNPTERF 449
>AY347952-1|AAR28375.1| 634|Anopheles gambiae putative sulfakinin
GPCR protein.
Length = 634
Score = 23.0 bits (47), Expect = 9.7
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -1
Query: 597 TLIIITVNRYF*ICTVIS 544
TL+ I++ RYF IC +S
Sbjct: 198 TLVAISLERYFAICRPLS 215
>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/proton
exchanger 3 protein.
Length = 1221
Score = 23.0 bits (47), Expect = 9.7
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 249 ETKKYSRFQRTSKESTRSATPIS*GSVVHFIKVE 350
E K++SR R + R ATP + SV+ + +V+
Sbjct: 925 EDKRFSRESRFLESEQRVATPTAIESVLPWKRVD 958
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 701,777
Number of Sequences: 2352
Number of extensions: 13770
Number of successful extensions: 123
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 123
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -