Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8f16
(771 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 33 0.060
SPBC30B4.02c |||R3H and G-patch domain, unknown biological role|... 28 1.3
SPCC338.08 |ctp1|mug38|sequence orphan|Schizosaccharomyces pombe... 28 1.7
SPCC1259.07 |||transcriptional regulatory protein Rxt3 |Schizosa... 28 1.7
SPAC1952.06c |||DUF1716 family protein|Schizosaccharomyces pombe... 27 2.2
SPBP35G2.13c |swc2||chromatin remodeling complex subunit Swc2 |S... 27 2.2
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 27 3.0
SPAC167.05 ||SPAC57A7.01|Usp |Schizosaccharomyces pombe|chr 1|||... 26 5.2
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 26 5.2
SPBC19C7.09c |uve1|uvde|endonuclease Uve1 |Schizosaccharomyces p... 26 5.2
SPAC57A7.10c |sec21||coatomer gamma subunit Sec21 |Schizosacchar... 26 6.9
SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomera... 26 6.9
SPAC4F10.09c |||ribosome biogenesis protein Noc1 |Schizosaccharo... 26 6.9
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 26 6.9
SPBC776.12c |hsk1||serine/threonine protein kinase Hsk1|Schizosa... 26 6.9
SPAC23D3.14c |aah2||alpha-amylase homolog Aah2|Schizosaccharomyc... 26 6.9
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 26 6.9
SPAC8E11.02c |rad24||14-3-3 protein Rad24|Schizosaccharomyces po... 26 6.9
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 25 9.1
SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 25 9.1
SPAC22H12.05c |||fasciclin domain protein |Schizosaccharomyces p... 25 9.1
SPAC22H12.02 |tfg3|taf14|transcription factor TFIIF complex subu... 25 9.1
SPAC2F7.16c |||phospholipase D |Schizosaccharomyces pombe|chr 1|... 25 9.1
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 32.7 bits (71), Expect = 0.060
Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Frame = +3
Query: 462 DEENFPKNDSQGEE--EPLSDKASAEEVASKRNQNEGDSLNDMESIGEIPASHSNDQETP 635
D+ + +DS+ E E +S+ + S + +G+S D + GE+ A S + +
Sbjct: 281 DDSSSDSSDSESESSSEDSDSTSSSSDSDSSSSSEDGNSNTDTTTSGEVSAQSSTNSTSS 340
Query: 636 SPSTSGDRDVGATSIGETLKRINAD 710
STS + + ++LKR + D
Sbjct: 341 EESTSVKDEDSSKIHDKSLKRKHED 365
>SPBC30B4.02c |||R3H and G-patch domain, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 28.3 bits (60), Expect = 1.3
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +3
Query: 429 KFSVLFEIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGD---SLNDMESIGE 599
KF+ L +EE D++ + +GE+E ++ E+ S ++ EG SL D ES+
Sbjct: 256 KFADLSVLEEDDDDEDEDEELEGEKEEEEEEKEKPEI-SNYDETEGKVNFSLEDSESLEF 314
Query: 600 IPASHSNDQETPSPSTSGDRD 662
S D + G+ D
Sbjct: 315 DEGSDDYDYAKLTTELVGNTD 335
>SPCC338.08 |ctp1|mug38|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 285
Score = 27.9 bits (59), Expect = 1.7
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Frame = +3
Query: 498 EEEPLSDKASAEEVASKRNQNEGDSLNDMESIGEIPASHSNDQETPS---PSTSGDRDVG 668
E E + K + +SK + N L+ EIP S + D+E PS P + ++ V
Sbjct: 50 ELESVKTKQISSSASSKVSSNTIQELDSTTDEDEIPGSDTVDEEDPSLNAPFSEKNQSVK 109
Query: 669 ATSIGETLKRINADLLVE 722
TL NA V+
Sbjct: 110 IPPHSPTLPVQNASAFVK 127
>SPCC1259.07 |||transcriptional regulatory protein Rxt3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 351
Score = 27.9 bits (59), Expect = 1.7
Identities = 19/63 (30%), Positives = 26/63 (41%)
Frame = +3
Query: 465 EENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESIGEIPASHSNDQETPSPS 644
EE P+N+ + D EE ++ + N SIG I S SND P S
Sbjct: 2 EEKTPENEQSKKTFDPKDSMKIEETSTNGSSQPSQPSNIKLSIGSILES-SNDNGDPEYS 60
Query: 645 TSG 653
+G
Sbjct: 61 ENG 63
>SPAC1952.06c |||DUF1716 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 564
Score = 27.5 bits (58), Expect = 2.2
Identities = 22/71 (30%), Positives = 33/71 (46%)
Frame = +3
Query: 525 SAEEVASKRNQNEGDSLNDMESIGEIPASHSNDQETPSPSTSGDRDVGATSIGETLKRIN 704
+ EE KRN E DSL S + A ++D+E G R G + + ++ K +
Sbjct: 9 NTEETNKKRNPEEADSLEPASSRRRL-AEENSDEENEEFDEEGGRFFG-SGLKKSEKTV- 65
Query: 705 ADLLVEFPAQK 737
D L E AQ+
Sbjct: 66 LDFLDEQEAQE 76
>SPBP35G2.13c |swc2||chromatin remodeling complex subunit Swc2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 316
Score = 27.5 bits (58), Expect = 2.2
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 447 EIEEVDEE-NFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSL 575
EIE+ DEE N + + + +S ++S EE K+ + EG+ +
Sbjct: 38 EIEKEDEEYNIEEEEEAERDIEISSESSDEEAELKKLEEEGEEV 81
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 27.1 bits (57), Expect = 3.0
Identities = 20/78 (25%), Positives = 36/78 (46%)
Frame = +3
Query: 468 ENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESIGEIPASHSNDQETPSPST 647
E++ +++ EEE D + +E ++NE D L A+ N+QE + +
Sbjct: 242 ESYERDEDVDEEEEEDDDENNDE-GDDEDENENDELRSENGSPNPSAAVINEQE--NMNM 298
Query: 648 SGDRDVGATSIGETLKRI 701
SG + T++ L RI
Sbjct: 299 SGIEEYDETNLLNELGRI 316
>SPAC167.05 ||SPAC57A7.01|Usp |Schizosaccharomyces pombe|chr
1|||Manual
Length = 601
Score = 26.2 bits (55), Expect = 5.2
Identities = 16/79 (20%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +3
Query: 525 SAEEVASKRNQNEGDSLNDMESIGEIPASHS-NDQETPSPSTSGDRDVGATSIGETLKRI 701
S+ S +++ G + N ++S + +D TPS + S ++ ++ +
Sbjct: 148 SSVSTNSDKSRTIGSNYNMLQSTKSTASQRRMSDSSTPSTTKSKEKIFSPKALSSPTQGA 207
Query: 702 NADLLVEFPAQKPSLNFSL 758
++++ E P +KP +F L
Sbjct: 208 SSNVTPESPPEKPIPSFVL 226
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 26.2 bits (55), Expect = 5.2
Identities = 16/77 (20%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +3
Query: 462 DEENFPKNDSQGEEEPLSDKASAEEVASKRNQNE--GDSLNDMESIGEIPASHSNDQETP 635
DE++ + + + E+P+ + + AS +N + D ++D+ S+ E S S+++
Sbjct: 94 DEQSVEEEEEEDSEKPVRKNKKSSKKASPKNAFDALADDMDDL-SLDE-EESESSEKSKK 151
Query: 636 SPSTSGDRDVGATSIGE 686
S +D G+ ++ +
Sbjct: 152 KKKKSKSKDDGSEALDD 168
>SPBC19C7.09c |uve1|uvde|endonuclease Uve1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 26.2 bits (55), Expect = 5.2
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +3
Query: 450 IEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLN 578
+EEVDE++ S E EP+ + E SKR ++ + N
Sbjct: 178 VEEVDEKSLKNESSSDEFEPVVPE-QLETPISKRRRSRSSAKN 219
>SPAC57A7.10c |sec21||coatomer gamma subunit Sec21
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 905
Score = 25.8 bits (54), Expect = 6.9
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 453 EEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQN-EGDSLNDMESIGEIPASHSNDQE 629
EE+D EN + E E ++ AE+ + + N E + LN +ES+ E +
Sbjct: 606 EEIDAENLRIKKATTEVE-FTEVTPAEDQNALASSNIETEFLNALESVSEFNEYGPVLKS 664
Query: 630 TPSP 641
+PSP
Sbjct: 665 SPSP 668
>SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans
isomerase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 361
Score = 25.8 bits (54), Expect = 6.9
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 453 EEVDEENFPKNDSQGEEEPL-SDKASAEEVASKRNQNEGD 569
EE +EE+ +++S EE+ L S A +V KR ++E +
Sbjct: 154 EESEEESESEDNSASEEDELDSAPAKKAQVKKKRTKDESE 193
>SPAC4F10.09c |||ribosome biogenesis protein Noc1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 860
Score = 25.8 bits (54), Expect = 6.9
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Frame = +3
Query: 456 EVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEG------DSLNDMESIGEIPASHS 617
E+DEE DS+ ++ ++D S E ++ N NE +D E++ EI +HS
Sbjct: 738 EMDEEE-SDFDSEEMDKAMTDMGSDSEQSADENDNESMASEEKPMFSDEENLSEI--AHS 794
Query: 618 NDQ 626
D+
Sbjct: 795 EDE 797
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 25.8 bits (54), Expect = 6.9
Identities = 18/73 (24%), Positives = 34/73 (46%)
Frame = +3
Query: 456 EVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESIGEIPASHSNDQETP 635
E +EE ++ ++E S+ +S E +S + GDS D S E +S ++++
Sbjct: 183 ESEEEEEVVEKTEEKKEGSSESSSDSESSSDSSSESGDS--DSSSDSESESSSEDEKKRK 240
Query: 636 SPSTSGDRDVGAT 674
+ S +R T
Sbjct: 241 AEPASEERPAKIT 253
>SPBC776.12c |hsk1||serine/threonine protein kinase
Hsk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 507
Score = 25.8 bits (54), Expect = 6.9
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 447 EIEEVDEENFPKNDSQG--EEEPLSDKASAEEVASKRNQNEGDSLNDMESIGE 599
EI EVD+EN +N SQ ++ P D+ E + + + ++ +E IGE
Sbjct: 25 EITEVDDENVNENKSQEMIQDIPARDREEIENITRTFVELQ-ENYRLIEKIGE 76
>SPAC23D3.14c |aah2||alpha-amylase homolog Aah2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 581
Score = 25.8 bits (54), Expect = 6.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 11 IYYKSCGIYLRFRKKIYSQKK 73
+YYK GI RFRK + Q++
Sbjct: 385 VYYKLIGILNRFRKSVQRQEE 405
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 25.8 bits (54), Expect = 6.9
Identities = 12/60 (20%), Positives = 24/60 (40%)
Frame = +3
Query: 444 FEIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESIGEIPASHSND 623
+E E + F K S+G + + V K+N + + + S+ P+ N+
Sbjct: 147 YEKESISSSQFSKKYSEGSLKSQQSNTRSNSVHEKQNTDHASNASSSSSVVSSPSLKPNN 206
>SPAC8E11.02c |rad24||14-3-3 protein Rad24|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 25.8 bits (54), Expect = 6.9
Identities = 24/97 (24%), Positives = 37/97 (38%)
Frame = +3
Query: 228 FITFDHHILNINKKIKYNTKSSGSQKIRSGLNIPERINKEHTLQINPIMDXXXXXXXXXX 407
F F + ILN + Y K + + I ++ E K+ TL + + D
Sbjct: 179 FSVFYYEILNSPDRACYLAKQAFDEAISELDSLSEESYKDSTLIMQLLRDNLTLWTSDAE 238
Query: 408 XXXXXXYKFSVLFEIEEVDEENFPKNDSQGEEEPLSD 518
Y + E +EN P N +GE EP +D
Sbjct: 239 ------YSAAAAGGNTEGAQENAPSNAPEGEAEPKAD 269
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 25.4 bits (53), Expect = 9.1
Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 498 EEEPLSDKASAEEVASKRNQ--NEGDSLNDMESIGEIPASHSNDQETPS 638
+EE + +++ ++ K+N NE + ND+E+I H N + +P+
Sbjct: 537 DEEGRTYQSNWQKETDKKNSLVNEAEEKNDLEAIEAAKNFHVNGKPSPT 585
>SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 513
Score = 25.4 bits (53), Expect = 9.1
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = +3
Query: 519 KASAEEVASKRNQNEGDSLNDMESIGEIPASHSNDQETPSPSTSGDRDVGATSIGET 689
+A + + +RN DS N G P++H+N PSTS D GAT E+
Sbjct: 437 RAPVDPNSQQRNNTSTDSAN-----GHNPSNHAN------PSTSTTNDQGATLRNES 482
>SPAC22H12.05c |||fasciclin domain protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 728
Score = 25.4 bits (53), Expect = 9.1
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 489 SQGEEEPLSDKASAEEVASKRNQN 560
+QGE EPL A ++ +A +RN +
Sbjct: 701 NQGEREPLLAPADSDTMAGRRNSS 724
>SPAC22H12.02 |tfg3|taf14|transcription factor TFIIF complex subunit
Tfg3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 241
Score = 25.4 bits (53), Expect = 9.1
Identities = 14/64 (21%), Positives = 24/64 (37%)
Frame = +3
Query: 531 EEVASKRNQNEGDSLNDMESIGEIPASHSNDQETPSPSTSGDRDVGATSIGETLKRINAD 710
E++ N L + + GE+P +E + +VGA K ++ D
Sbjct: 117 EDIELNINATRPGLLKALTATGEVPGYSDEGEEARKDKRKNESEVGAGKKKAKAKPVDMD 176
Query: 711 LLVE 722
L E
Sbjct: 177 KLAE 180
>SPAC2F7.16c |||phospholipase D |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1369
Score = 25.4 bits (53), Expect = 9.1
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 441 LFEIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQN 560
L E+ + E PK D+ E+P+ D+ E++ SK N
Sbjct: 1190 LLEVNPISGETIPKFDASSFEDPVCDE-FFEDIWSKVASN 1228
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,881,620
Number of Sequences: 5004
Number of extensions: 57601
Number of successful extensions: 221
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 221
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 371330890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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