Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8f16
(771 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43863| Best HMM Match : FLO_LFY (HMM E-Value=1.5) 34 0.11
SB_51285| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_646| Best HMM Match : MGAT2 (HMM E-Value=2.1) 34 0.15
SB_45661| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.15
SB_43512| Best HMM Match : RNA_pol_delta (HMM E-Value=4.7) 34 0.15
SB_51289| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_30460| Best HMM Match : DSPc (HMM E-Value=2.5e-38) 33 0.25
SB_31962| Best HMM Match : DUF1168 (HMM E-Value=1.5) 32 0.45
SB_35419| Best HMM Match : SMC_C (HMM E-Value=1.9e-05) 31 0.78
SB_4107| Best HMM Match : M (HMM E-Value=8e-22) 31 1.0
SB_47280| Best HMM Match : DUF655 (HMM E-Value=2.2) 31 1.4
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 31 1.4
SB_52803| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_23985| Best HMM Match : CRAM_rpt (HMM E-Value=3.4) 31 1.4
SB_26497| Best HMM Match : DUF963 (HMM E-Value=0.24) 30 1.8
SB_47303| Best HMM Match : CPSF_A (HMM E-Value=0) 30 2.4
SB_22213| Best HMM Match : S-antigen (HMM E-Value=5.4) 30 2.4
SB_57694| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_48437| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11) 29 3.1
SB_1060| Best HMM Match : Tropomyosin (HMM E-Value=8.5) 29 3.1
SB_55925| Best HMM Match : Homeobox (HMM E-Value=1e-26) 29 3.1
SB_25840| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_23558| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_18119| Best HMM Match : Gemini_C4 (HMM E-Value=5.1) 29 3.1
SB_51046| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_50703| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_38766| Best HMM Match : 7tm_1 (HMM E-Value=1e-07) 29 4.2
SB_31610| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_42227| Best HMM Match : SDA1 (HMM E-Value=0.66) 29 4.2
SB_36640| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_22076| Best HMM Match : MIP (HMM E-Value=3.89981e-42) 29 4.2
SB_19615| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_17867| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_8229| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_53565| Best HMM Match : Amino_oxidase (HMM E-Value=9.7e-19) 29 5.5
SB_41427| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_33874| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_56834| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_12094| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.00041) 28 7.3
SB_29636| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_15911| Best HMM Match : Sec7 (HMM E-Value=0) 28 7.3
SB_54260| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_44813| Best HMM Match : Crystallin (HMM E-Value=0.26) 28 9.6
SB_41181| Best HMM Match : DUF164 (HMM E-Value=2.1) 28 9.6
SB_30938| Best HMM Match : DAGK_acc (HMM E-Value=1.4013e-45) 28 9.6
SB_14204| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_40403| Best HMM Match : Vicilin_N (HMM E-Value=0.012) 28 9.6
SB_40168| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_2799| Best HMM Match : rve (HMM E-Value=7.8e-26) 28 9.6
>SB_43863| Best HMM Match : FLO_LFY (HMM E-Value=1.5)
Length = 592
Score = 34.3 bits (75), Expect = 0.11
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +3
Query: 453 EEVDEENFPKNDSQGEEEPLSDK-ASAEE--VASKRNQNEGDSLNDMESIGEIPASHSND 623
E+ +E + KN S+ +E+ DK A +E ++ +R++++G+ + S ++HS
Sbjct: 410 EKKEERDLDKNSSERKEKHERDKEAKTKERSISKERDKSKGEKTKEKSS-----SNHSKH 464
Query: 624 QETPSPSTSGDRDV 665
+ TPS TS D +V
Sbjct: 465 KSTPSLDTSKDGEV 478
>SB_51285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 34.3 bits (75), Expect = 0.11
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +3
Query: 453 EEVDEENFPKNDSQGEEEPLSDK-ASAEE--VASKRNQNEGDSLNDMESIGEIPASHSND 623
E+ +E + KN S+ +E+ DK A +E ++ +R++++G+ + S ++HS
Sbjct: 18 EKKEERDLDKNSSERKEKHERDKEAKTKERSISKERDKSKGEKTKEKSS-----SNHSKH 72
Query: 624 QETPSPSTSGDRDV 665
+ TPS TS D +V
Sbjct: 73 KSTPSLDTSKDGEV 86
>SB_646| Best HMM Match : MGAT2 (HMM E-Value=2.1)
Length = 298
Score = 33.9 bits (74), Expect = 0.15
Identities = 17/82 (20%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = +3
Query: 453 EEVDEENFPKNDSQG----EEEPLSDKASAEEVASKRNQNEGDSLNDMESIGEIPASHSN 620
++ D+EN+ +ND + E ++ ++ N N+ D+ ND ++ + + N
Sbjct: 210 DDDDDENYDENDDENVGNDNENENDNENDSDNDNDNDNDNDNDNDNDNDNDNDNDNDNDN 269
Query: 621 DQETPSPSTSGDRDVGATSIGE 686
D S S+ G + + +G+
Sbjct: 270 DNTISSSSSGGGGGISSLEVGQ 291
>SB_45661| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 189
Score = 33.9 bits (74), Expect = 0.15
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +3
Query: 453 EEVDEENFPKNDSQGEEE--PLSDKASAEEVASKRNQNEGDSLNDMESIG-EIPASHSND 623
EE DEE S GEE SD+ ++ S +++G+ + ES G E S+
Sbjct: 52 EESDEEGSDGEGSDGEESDGEESDEEESDGEESDGEESDGEESDGEESDGEESDGEESDG 111
Query: 624 QETPSPSTSGDRDVGATSIGE 686
+E+ + G+ G S GE
Sbjct: 112 EESDEEGSDGEESDGEESDGE 132
Score = 28.3 bits (60), Expect = 7.3
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +3
Query: 453 EEVDEENFPKNDSQGEEE--PLSDKASAEEVASKRNQNEGDSLNDMESIG-EIPASHSND 623
EE DEE +S GEE SD ++ S +++G+ ++ S G E S+
Sbjct: 72 EESDEEESDGEESDGEESDGEESDGEESDGEESDGEESDGEESDEEGSDGEESDGEESDG 131
Query: 624 QETPSPSTSGDRDVGATSIGE 686
+E+ + + G S GE
Sbjct: 132 EESDGKGSDEEGSDGEESDGE 152
>SB_43512| Best HMM Match : RNA_pol_delta (HMM E-Value=4.7)
Length = 241
Score = 33.9 bits (74), Expect = 0.15
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = +3
Query: 480 KNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESIGEIPASHSNDQETPSPSTSGDR 659
K+DS E ++ + E AS ++N D + E+ E PA+ ++TP+ TSG+
Sbjct: 25 KHDSIAEASDATEAVAPEAPASPESENT-DDFKEPEAKEETPAAAPKAEDTPALETSGES 83
Query: 660 DVGATSI 680
+ T +
Sbjct: 84 KLPDTPV 90
>SB_51289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 626
Score = 33.5 bits (73), Expect = 0.19
Identities = 28/85 (32%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Frame = +3
Query: 447 EIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQN-EGDSLNDMESIGEIPASHSN- 620
EI E EE+F D EE P S SAE + Q EG N E E P+ N
Sbjct: 13 EISE-GEEDFESADEGEEESPPSLATSAESTSGTAEQTMEGSVENSQEKSPERPSLQENV 71
Query: 621 -DQETPSPSTSGDRDVGATSIGETL 692
D + + G+++ T ETL
Sbjct: 72 DDVKMEVNAKPGEQETRETPSSETL 96
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 33.5 bits (73), Expect = 0.19
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +3
Query: 444 FEIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESIGEIPASHSND 623
F+ + E+ K + EEE ++ A E +K ++ E D L +E + ++ H+N+
Sbjct: 108 FQAHRMAEKQEEKMQQEREEEEANNPMKALENRTKESKQEMDILEKLEELKDLNTRHANE 167
Query: 624 Q 626
Q
Sbjct: 168 Q 168
>SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 950
Score = 33.1 bits (72), Expect = 0.25
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +3
Query: 453 EEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDS--LNDMESIGEIPASHSNDQ 626
E+ +EE+ +++ + EEE ++K + + + +K + DS L++ ES E S +
Sbjct: 643 EKEEEESEEESEEESEEEEETEKVNKDALKAKATEKSNDSLCLSEEESEEEESEEESEED 702
Query: 627 ETPSPSTSGDRDVGATS 677
E S + TS
Sbjct: 703 EEEGAKPSASAKIAKTS 719
Score = 31.5 bits (68), Expect = 0.78
Identities = 19/84 (22%), Positives = 40/84 (47%)
Frame = +3
Query: 447 EIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESIGEIPASHSNDQ 626
++++ DEE+ + + EE+ S+K S+ +V +K+ +G E E D+
Sbjct: 727 KVDKDDEEDDDDEEEESEEDE-SNKPSSRQVTAKKEDKKGKKKKKEEEEEEEEDQEEEDE 785
Query: 627 ETPSPSTSGDRDVGATSIGETLKR 698
++ S G +D + G+ K+
Sbjct: 786 DS-SGKKKGKKDSSESEKGKAKKQ 808
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +3
Query: 435 SVLFEIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLN-DMESIGEIPAS 611
S+ EE +EE + + EEE ASA+ + +N+ ++ D E +
Sbjct: 682 SLCLSEEESEEEESEEESEEDEEEGAKPSASAKIAKTSETENKVPKVDKDDEEDDDDEEE 741
Query: 612 HSNDQETPSPST 647
S + E+ PS+
Sbjct: 742 ESEEDESNKPSS 753
>SB_30460| Best HMM Match : DSPc (HMM E-Value=2.5e-38)
Length = 550
Score = 33.1 bits (72), Expect = 0.25
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = +3
Query: 444 FEIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESIGE---IPASH 614
FE ++ + +N K D + +EE LS +EV++ N N +S D++S + I
Sbjct: 143 FEPQDTEIQNVEKGDEE-DEEILSIN---DEVSTNNNNNNEESAEDLDSTKQTACIERED 198
Query: 615 SNDQETPSPSTSGD 656
S+DQE P D
Sbjct: 199 SSDQENQPPFQLND 212
>SB_31962| Best HMM Match : DUF1168 (HMM E-Value=1.5)
Length = 205
Score = 32.3 bits (70), Expect = 0.45
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +3
Query: 447 EIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESIGEIPASHSND 623
E EE +EE + GEEE ++D+ +SK NE D N+ + E S+ ++
Sbjct: 107 EEEEEEEEKEEGKEEDGEEEVVTDERGIS--SSKDESNESDESNESDESNESDESNGSE 163
>SB_35419| Best HMM Match : SMC_C (HMM E-Value=1.9e-05)
Length = 867
Score = 31.5 bits (68), Expect = 0.78
Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Frame = +3
Query: 483 NDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESIGEIPASHSNDQETPSPSTSGDRD 662
+D+ G+E S+ +++ +SKR++ + D ND + S+D + P + ++D
Sbjct: 17 SDASGDEGASSEPSTSHAQSSKRSKPDTDDANDTD------LQDSDDLDCTQPELATNKD 70
Query: 663 VGATSIGETLKRIN--ADLLVEFPAQKPSLNF 752
I E + +N ++E P P++NF
Sbjct: 71 EAEVGIIEKVTLVNFMCHTMLEVPL-GPNVNF 101
>SB_4107| Best HMM Match : M (HMM E-Value=8e-22)
Length = 2039
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +3
Query: 501 EEPLSDKASAEEVASKRNQNEGDSLNDMES-IGEIPASHSNDQE 629
E +++K +AEE A ++ Q+ DSL + E+ + E HS+D E
Sbjct: 87 ESSMNEKTTAEENAKRQLQSLNDSLKEKEARLKETEEEHSSDLE 130
>SB_47280| Best HMM Match : DUF655 (HMM E-Value=2.2)
Length = 508
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +3
Query: 453 EEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQ 557
EE+D+ + +ND E++PLS + A++ +SKR Q
Sbjct: 261 EEIDDTD-ERNDELEEKDPLSPSSGAKDDSSKRKQ 294
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 30.7 bits (66), Expect = 1.4
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 7/90 (7%)
Frame = +3
Query: 453 EEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESIGEIPASHSN-DQE 629
EEVD + Q E+ D AE V NE + I ++N ++E
Sbjct: 3051 EEVDVAAVSNKEEQHGEDKEEDTLQAEPVGDGEPDNEQPREGEPVEAEHIYDDNNNSNEE 3110
Query: 630 TP------SPSTSGDRDVGATSIGETLKRI 701
P SPS S +RD GA+ GE+ +
Sbjct: 3111 VPRYYVDFSPSGSFERDSGASEEGESYPEV 3140
>SB_52803| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = -1
Query: 669 HQHLCPH*YLVKESPDRYYDLLEFLQCFPCHLKNLPHFDSVSMQLLRH*PYHLEVLP-HL 493
H HL Y + PD Y+ + L+ P HL N P + L + P HL P HL
Sbjct: 1 HDHLNNKPYHLNNKPDHLYNKPDHLKNKPYHLNNKPDHLNNKPDHLNNKPDHLNNKPDHL 60
Query: 492 D 490
+
Sbjct: 61 N 61
>SB_23985| Best HMM Match : CRAM_rpt (HMM E-Value=3.4)
Length = 323
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = +3
Query: 447 EIEEVDEENFPKNDSQGEEEPLSDKASAEE---VASKRNQNEGDSLNDMESIGEIPASHS 617
E E+ +EE + +G+EE ++ +E +SK +E D N+ + E S+
Sbjct: 47 EEEQTEEEEEEEEKEEGKEEDGEEEVVTDERGISSSKDESDESDESNESDESNESDKSNE 106
Query: 618 NDQETPSPSTS 650
+D+ S ++
Sbjct: 107 SDESNESDESN 117
>SB_26497| Best HMM Match : DUF963 (HMM E-Value=0.24)
Length = 889
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +3
Query: 504 EPLSDKASAEEVASKRNQNEGDSLNDMESIGEIPASHS--NDQETPSPSTSGDRDVG 668
E + + + K N+ E S+N GE PAS S ND+ P PS + + +G
Sbjct: 273 ESNDSRQKSGDAEEKENEKESASINRRLFGGENPASTSTTNDENQPPPSQAQPQSMG 329
>SB_47303| Best HMM Match : CPSF_A (HMM E-Value=0)
Length = 1291
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -1
Query: 585 PCHLKNLPHFDSVSMQLLRH*PYHLEVLPHLDCHF 481
P H + L H S +LLRH P+H VL H H+
Sbjct: 1007 PFHYRLLRHH-SFHYRLLRHHPFHYRVLRHHPFHY 1040
Score = 28.3 bits (60), Expect = 7.3
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 7/78 (8%)
Frame = -1
Query: 693 LMFHQY**HQHLCPH*YLVKESPDRYYDLLEF-------LQCFPCHLKNLPHFDSVSMQL 535
L +H + H H P Y + +Y LL L+ P H + L H ++
Sbjct: 996 LNYHHH--HYHYHPFHYRLLRHHSFHYRLLRHHPFHYRVLRHHPFHYRVLRHHPFY-YRV 1052
Query: 534 LRH*PYHLEVLPHLDCHF 481
LRH P+H VL H H+
Sbjct: 1053 LRHHPFHYRVLRHHPFHY 1070
>SB_22213| Best HMM Match : S-antigen (HMM E-Value=5.4)
Length = 247
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +3
Query: 462 DEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDS-LNDMESIGEIPASH-SNDQETP 635
D++ PK+ + +++P E+ ++Q++ ND + + P S+DQE
Sbjct: 151 DQDEDPKDPNDQDQDPKDPNDQDEDPKDPKDQDQDPKDPNDQDQDPKDPNDQDSDDQEDQ 210
Query: 636 SPSTSGDRDV 665
P +RDV
Sbjct: 211 EPDNEKERDV 220
>SB_57694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 272
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +3
Query: 462 DEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDS-LNDMESIGEIPASH-SNDQETP 635
D++ PK+ + +++P E+ ++Q++ ND + + P S+DQE
Sbjct: 80 DQDEDPKDPNDQDQDPKDPNDQDEDPKDPKDQDQDPKDPNDQDQDPKDPNDQDSDDQEDQ 139
Query: 636 SPSTSGDRDV 665
P +RDV
Sbjct: 140 EPDNEKERDV 149
>SB_48437| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4247
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/66 (30%), Positives = 31/66 (46%)
Frame = +3
Query: 459 VDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESIGEIPASHSNDQETPS 638
+++E FP +DSQG+ E K A +V + N G D + E P + + +PS
Sbjct: 2657 LEKEEFPGHDSQGKGE----KEDANDVEVQWNDGSGQKSTDRQ---EKPIAGGKTKPSPS 2709
Query: 639 PSTSGD 656
S D
Sbjct: 2710 GSIKTD 2715
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +3
Query: 519 KASAEEVASKRNQNEGDSLNDMESIGEIPASHSNDQETPSPSTSGDRDVGAT 674
+A A+ V + NEG SL + P++ E SPS SGD + T
Sbjct: 2606 QALAKAVEDETQDNEGSSLTQKDKGASSPSTPDTSGEETSPS-SGDAESDGT 2656
>SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11)
Length = 744
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/63 (23%), Positives = 33/63 (52%)
Frame = +3
Query: 516 DKASAEEVASKRNQNEGDSLNDMESIGEIPASHSNDQETPSPSTSGDRDVGATSIGETLK 695
D+ EEV S+ + + DS+ND P ++ N+ + +P+T+ +S G ++
Sbjct: 342 DREHNEEVTSQSHDEQTDSVND-----HSPTANKNNNDDTTPNTALSDKCERSSSGNVIR 396
Query: 696 RIN 704
+++
Sbjct: 397 KLD 399
>SB_1060| Best HMM Match : Tropomyosin (HMM E-Value=8.5)
Length = 430
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -1
Query: 627 PDRYYDLLEFLQCFPCHLKNLPHFDSVSMQLLRH*PYHLEVLP-HLD 490
PD Y+ L+ P HL N P+ + L + PYHL P HL+
Sbjct: 205 PDHLYNKLDHQDNKPYHLNNKPYHLNNKPYHLNNKPYHLNNKPDHLN 251
>SB_55925| Best HMM Match : Homeobox (HMM E-Value=1e-26)
Length = 1064
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Frame = +3
Query: 453 EEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESIGE----IPASHSN 620
++ D+E +ND QG+ S + EV SKR Q +IG+ P HSN
Sbjct: 138 KDSDKEKLKRNDYQGQRSRQSVEMEVTEV-SKRPQKSSHDNRQYSAIGQGITKPPIKHSN 196
Query: 621 DQETPSPST 647
+ + T
Sbjct: 197 TEHQTTSRT 205
>SB_25840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 768
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +3
Query: 456 EVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDME-SIGEIPASHSNDQET 632
E DE++ ++ Q E + + E A ++ ++G S ++E + +IP+SH + +T
Sbjct: 228 ETDEDDLEIHE-QTYEGSAAKTSDTETSAHQQASSDGCSFPEVEDTYYDIPSSHQHSSKT 286
Query: 633 PSP 641
P P
Sbjct: 287 PDP 289
>SB_23558| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/100 (19%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = +3
Query: 456 EVDEENFPKN-DSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESIGEIPASHSNDQET 632
E D ++ K+ D++ +E SDK+ E+ A ++N+G ++ E + + ++E
Sbjct: 279 EKDSDDDEKSADTKNDEISDSDKSDTEKDADSDSENDGSGTSESEYLSSEESDEDVNEEF 338
Query: 633 PSPSTSGDRDVGATSIGETLKRINADLLVEFPAQKPSLNF 752
+ G +S + + ++ L+ + + NF
Sbjct: 339 DLEKYIRKLERGTSSSEDDASSVTSEKLINRAVLRATKNF 378
>SB_18119| Best HMM Match : Gemini_C4 (HMM E-Value=5.1)
Length = 146
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +3
Query: 510 LSDKASAEEVASKRNQNEGDSLNDMESIGEIPASHSNDQETPSPSTSGDRDVGATSIGET 689
L ++S + V S N+N G L + + H + Q S + G+R T+ GET
Sbjct: 80 LRSESSVKIVLSSDNENNGAGLVNTSTSTNYLCYHCSTQPYKSRQSKGNRPTEETAEGET 139
Query: 690 LKR 698
R
Sbjct: 140 TTR 142
>SB_51046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 261
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/69 (20%), Positives = 28/69 (40%)
Frame = +3
Query: 477 PKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESIGEIPASHSNDQETPSPSTSGD 656
P+ D++G + SD + + + + S + S E + + TP+PS
Sbjct: 105 PRTDAEGSSDSDSDSSDSSGSDDDSSSSSSSSSSSSSSSSEETDNETEQPATPAPSRQKP 164
Query: 657 RDVGATSIG 683
+ S+G
Sbjct: 165 TSLNGASLG 173
>SB_50703| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +3
Query: 447 EIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRN-QNEGDSLNDMESI 593
E EEV+EE + + + EEE ++ EE K + Q E D + E I
Sbjct: 51 EEEEVEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEDKQEEEDKQEEEEDI 100
>SB_38766| Best HMM Match : 7tm_1 (HMM E-Value=1e-07)
Length = 625
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -3
Query: 346 SLFIRSGIFRPDLIFCDPELLVLYLIFL 263
S+F S D FCDPE+ VLYL+ L
Sbjct: 547 SIFTPSSSLFADF-FCDPEIAVLYLVLL 573
>SB_31610| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 109
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/61 (24%), Positives = 27/61 (44%)
Frame = +3
Query: 447 EIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESIGEIPASHSNDQ 626
E EE +EE + + + EEE ++ EE + + EG+ + E E ++
Sbjct: 18 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEGEEEEEEEEEEEEEEEEEEEE 77
Query: 627 E 629
E
Sbjct: 78 E 78
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/62 (22%), Positives = 27/62 (43%)
Frame = +3
Query: 444 FEIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESIGEIPASHSND 623
F +EE +EE + + + EEE ++ EE + + E + + E E +
Sbjct: 11 FHVEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEGEEEEEEEEEEEEE 70
Query: 624 QE 629
+E
Sbjct: 71 EE 72
Score = 28.3 bits (60), Expect = 7.3
Identities = 21/95 (22%), Positives = 37/95 (38%)
Frame = +3
Query: 447 EIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESIGEIPASHSNDQ 626
E EE +EE + + + EEE ++ EE + + E + + E E ++
Sbjct: 14 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEGEEEEEEEEEEEEEEEE 73
Query: 627 ETPSPSTSGDRDVGATSIGETLKRINADLLVEFPA 731
E + R V + + N LLV+ A
Sbjct: 74 EEEEEEATFRRHVRGALV--RIPDFNQKLLVDLAA 106
>SB_42227| Best HMM Match : SDA1 (HMM E-Value=0.66)
Length = 806
Score = 29.1 bits (62), Expect = 4.2
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +3
Query: 462 DEENFPKNDSQGEEE-PLSDKASAEEVASKRNQNEGDSLNDMESIGEIPASHSNDQETPS 638
++E+ +S G + P S S V +RN+ E + +MES E + S+++E P
Sbjct: 691 NKEHLSDVESNGSKSAPASPTGSP--VTGRRNKAEQSTGLNMESSDEESGNESDEKEAPV 748
Query: 639 PSTS 650
PS S
Sbjct: 749 PSPS 752
>SB_36640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 283
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/65 (24%), Positives = 29/65 (44%)
Frame = +3
Query: 435 SVLFEIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESIGEIPASH 614
SV+ E EE +EE + + + EEE ++ EE + + E + + E E
Sbjct: 192 SVVEEEEEEEEEEVEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEEEEEEEEEEE 251
Query: 615 SNDQE 629
++E
Sbjct: 252 EEEEE 256
>SB_22076| Best HMM Match : MIP (HMM E-Value=3.89981e-42)
Length = 365
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +3
Query: 522 ASAEEVASKRNQNEGDSLNDMESIGEIPASHSNDQET 632
+SAEE+ASK +QNEG N +E + N QET
Sbjct: 326 SSAEEMASKSHQNEG--FNCLEVVCNKSQISENGQET 360
>SB_19615| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1376
Score = 28.7 bits (61), Expect = 5.5
Identities = 19/58 (32%), Positives = 24/58 (41%)
Frame = +3
Query: 504 EPLSDKASAEEVASKRNQNEGDSLNDMESIGEIPASHSNDQETPSPSTSGDRDVGATS 677
E + A ++ KR S SI E+ +N ETPSP T D G TS
Sbjct: 766 EEIPSFAVQQDTLRKRISTTDSSQAVCTSIRELQEEKNNGNETPSPDTK-DNTEGTTS 822
>SB_17867| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 62
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 447 EIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDS 572
E EE +EE K + + EEE ++ +E +K+N+N+ S
Sbjct: 20 EEEEEEEEEEEKEEEEEEEEEEEEEEEDKEDDNKKNKNKKSS 61
>SB_8229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 160
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/64 (21%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +3
Query: 462 DEENFPKNDSQGEEEPLSDKASAEEVASKR-NQNEGDSLNDMESIGEIPASHSNDQETPS 638
D +N ND+ + + +D + ++ + N N+ D+ ND ++ + + ND +T +
Sbjct: 62 DNDNDNDNDNDNDNDNDNDNDNDIDIHNDNDNDNDNDNDNDNDNDNDNDNDNDNDNDTTT 121
Query: 639 PSTS 650
+T+
Sbjct: 122 TTTT 125
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/81 (19%), Positives = 35/81 (43%)
Frame = +3
Query: 462 DEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESIGEIPASHSNDQETPSP 641
D +N ND+ + + +D + ++ N N+ D+ ND ++ + + ND + +
Sbjct: 60 DNDNDNDNDNDNDNDNDNDNDNDNDI-DIHNDNDNDNDNDNDNDNDNDNDNDNDNDNDND 118
Query: 642 STSGDRDVGATSIGETLKRIN 704
+T+ T+ T N
Sbjct: 119 TTTTTTTTTTTTTTTTTTTTN 139
>SB_53565| Best HMM Match : Amino_oxidase (HMM E-Value=9.7e-19)
Length = 438
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +3
Query: 447 EIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESI 593
E EE +EE + + + EEE DK EE + + E + + E +
Sbjct: 37 EEEEEEEEEEEEEEEEEEEEEEEDKEEEEEEEEEEEEEEEEEEEEEEEV 85
>SB_41427| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 531
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +3
Query: 510 LSDKASAEEVASKRNQNEGDSLNDMESI 593
+SD ASAE ++SKRN+ SLN +E+I
Sbjct: 3 ISDSASAEFLSSKRNKKR--SLNSIENI 28
>SB_33874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +3
Query: 441 LFEIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMES 590
L I E+ + + QGE E + +A EEV R + + +++ D+E+
Sbjct: 69 LVNIPSEQSEDDNEVEEQGEAEDIKSEAKKEEVLKIREKVKEENMKDLEA 118
>SB_56834| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 552
Score = 28.3 bits (60), Expect = 7.3
Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 9/96 (9%)
Frame = +3
Query: 447 EIEEVDEENFPKNDSQGEEEPLSDKASAEEVA-----SKRNQNEGDSLNDMESIGEIPAS 611
E EE +EE +++ GE+E + EE + + + D + E + E P+
Sbjct: 390 EDEEEEEEEENEDEENGEDEENGEDEENEENGEDDDDEEEEEEDSDESEESEYLEEQPSR 449
Query: 612 HS----NDQETPSPSTSGDRDVGATSIGETLKRINA 707
S + T PS SG R + + + RI +
Sbjct: 450 RSTVRPKVRPTALPSKSGSRSAASRTSRSSRSRITS 485
>SB_12094| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.00041)
Length = 754
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/67 (26%), Positives = 27/67 (40%)
Frame = +3
Query: 462 DEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESIGEIPASHSNDQETPSP 641
D+++ K G D A ++ +Q EG+ + +IPA H ND
Sbjct: 316 DDQHPSKRGLTGRLRSKQDTGRARRSTTRNSQGEGEGTR--KKTNKIPAHHENDDS--GS 371
Query: 642 STSGDRD 662
T GD D
Sbjct: 372 ETVGDVD 378
>SB_29636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = +3
Query: 447 EIEEVDEENFPKNDSQGEEE--PLSD--KASAEEVASKRNQNEGDSLNDMESIGEI 602
E+E EE PK + +EE P D K A+E + + E + D+E + +I
Sbjct: 249 EVEAPKEEESPKEEDTPKEEDAPKEDTPKEEAKEEPKEDTKEEPKKIEDLEKLSDI 304
>SB_15911| Best HMM Match : Sec7 (HMM E-Value=0)
Length = 1220
Score = 28.3 bits (60), Expect = 7.3
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +3
Query: 459 VDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESIGEIPA-SHSNDQETP 635
V E++ ++ + D EEV + QN G + N S+ E P S S+ E P
Sbjct: 374 VHEDDPNSCTAESTQSSAGDVKETEEVQYAQAQNSGHAENITSSLSEPPGESTSHMSEHP 433
Query: 636 SPSTSGDRDVGATS 677
T +D + S
Sbjct: 434 EQDTEQAKDATSNS 447
>SB_54260| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 68
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +3
Query: 447 EIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDME 587
E EE +EE + + + EEE ++ EE + + EG+ + E
Sbjct: 6 EEEEEEEEEEEEEEEEEEEEEKEEEEEEEEEEEEEEEEEGEEEEEEE 52
>SB_44813| Best HMM Match : Crystallin (HMM E-Value=0.26)
Length = 688
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 552 NQNEGDSLNDMESIGEIPASHSNDQETPSPSTSGDRDVGA 671
+ ++GD+ N +GEI S+S+ +T +T G RD A
Sbjct: 414 SNDKGDTENLSAFVGEIMQSNSSSAKTQIRTTPGKRDQSA 453
>SB_41181| Best HMM Match : DUF164 (HMM E-Value=2.1)
Length = 258
Score = 27.9 bits (59), Expect = 9.6
Identities = 20/88 (22%), Positives = 35/88 (39%)
Frame = +3
Query: 447 EIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESIGEIPASHSNDQ 626
++ E + + P + +EE + + + N DS+N E I ++P N Q
Sbjct: 129 DVPEEEVNDVPVDSINVQEEMNDVPVGSINIQEEMNDVPVDSINVQEEINDVPVGSINIQ 188
Query: 627 ETPSPSTSGDRDVGATSIGETLKRINAD 710
E D VG +I E + + D
Sbjct: 189 E-----EMNDVPVGGINIQEEVNDVPVD 211
>SB_30938| Best HMM Match : DAGK_acc (HMM E-Value=1.4013e-45)
Length = 709
Score = 27.9 bits (59), Expect = 9.6
Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
Frame = +3
Query: 498 EEEPLSDKASAEEVASKRNQNEGDSLNDMESIGEIPASHSNDQETPSPSTSGDR-DVGAT 674
+ E + K E S ++N ++ IG+ A H + +TS +R + AT
Sbjct: 106 KRESVEHKRDTSENRSNTSENRSNTSATQVRIGQTQAQHKRESVKHKRNTSENRSNTSAT 165
Query: 675 S--IGETLKRINADLLVEFPAQKP 740
IG T ++ N + E + +P
Sbjct: 166 KARIGRTQEQHNIQVANEHQSSQP 189
>SB_14204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Frame = +3
Query: 453 EEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESI---GEIPASHSND 623
EE +E N +N+ EEE E +++ EG+ + E E+ N+
Sbjct: 101 EENEEGNEEENEEGNEEENEEGNEEGNEEGNEKENEEGNEEGNEEGNEEGNEVGNEEGNE 160
Query: 624 QETPSPSTSGDR 659
+E + G+R
Sbjct: 161 EENEERNEEGNR 172
>SB_40403| Best HMM Match : Vicilin_N (HMM E-Value=0.012)
Length = 1119
Score = 27.9 bits (59), Expect = 9.6
Identities = 24/98 (24%), Positives = 40/98 (40%), Gaps = 6/98 (6%)
Frame = +3
Query: 447 EIEEVDEENFPKND--SQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESIGEIPASHSN 620
EIEE ++ F EEE + A E ++ L+ E E+ ++N
Sbjct: 230 EIEENKKKEFCSRSVVRPVEEEVIVSVAKTSESSASELDTLFSKLSSEEESSEMNGLNNN 289
Query: 621 D----QETPSPSTSGDRDVGATSIGETLKRINADLLVE 722
+ ++ PSP +GD+D +G L L+E
Sbjct: 290 ESLAHRKGPSPPPTGDQDSYKLPVGRVLSEQEEKNLIE 327
>SB_40168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1554
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +3
Query: 447 EIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNE--GDSLNDMESIGEIP 605
E+E+ +EE + + + EEE + EE K N+ E D ++ E GE P
Sbjct: 40 EVEKEEEEEEVEEEEEEEEEKEDEIEVEEEEEEKENEEEENEDEEDEEEEEGEDP 94
>SB_2799| Best HMM Match : rve (HMM E-Value=7.8e-26)
Length = 1058
Score = 27.9 bits (59), Expect = 9.6
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +3
Query: 471 NFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESIGEIPASHSNDQETPSPSTS 650
N DSQ + + ++ S + V + + EG+ ND S E +DQE+ PS+S
Sbjct: 32 NINIRDSQLDGKAPNENESGKRVWYEEGEEEGEGSND-GSKEEGGEGKEDDQESYLPSSS 90
Query: 651 GD 656
D
Sbjct: 91 SD 92
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,571,473
Number of Sequences: 59808
Number of extensions: 353260
Number of successful extensions: 1552
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 1096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1358
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2095976575
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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