Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8f16
         (771 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    26   1.5  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    26   1.5  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            24   6.0  

>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 14/60 (23%), Positives = 25/60 (41%)
 Frame = +3

Query: 456 EVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESIGEIPASHSNDQETP 635
           +   ++   +DS       S   S E      ++++ DSL+  E    IP S  +  +TP
Sbjct: 448 DTSSDSSSSDDSSSSSSSSSSSESDEHDFYSSSESDSDSLSSEEFYQPIPESMKDAPQTP 507


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 14/60 (23%), Positives = 25/60 (41%)
 Frame = +3

Query: 456 EVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESIGEIPASHSNDQETP 635
           +   ++   +DS       S   S E      ++++ DSL+  E    IP S  +  +TP
Sbjct: 448 DTSSDSSSSDDSSSSSSSSSSSESDEHDFYSSSESDSDSLSSEEFYQPIPESMKDAPQTP 507


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 16/64 (25%), Positives = 25/64 (39%)
 Frame = +3

Query: 444 FEIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKRNQNEGDSLNDMESIGEIPASHSND 623
           FEI + D  N   N ++G   P  ++      A   ++NEGD  +     G +      D
Sbjct: 9   FEITDYDLAN-EFNPNRGRRRPTKNQQIYGVWADDDSENEGDEGSGGRRRGRMGGKQPKD 67

Query: 624 QETP 635
              P
Sbjct: 68  YSAP 71


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 680,129
Number of Sequences: 2352
Number of extensions: 13087
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)