Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8f15
(726 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 127 1e-29
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 120 9e-28
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 96 3e-20
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 93 3e-19
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 86 2e-17
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 84 1e-16
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 6e-14
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 4e-13
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 70 2e-12
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 69 5e-12
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 57 1e-08
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 54 2e-07
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 50 3e-06
SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) 46 4e-05
SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19) 44 1e-04
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 42 4e-04
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 40 0.002
SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058) 36 0.025
SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05) 34 0.10
SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_6800| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.54
SB_28982| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_55515| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_43183| Best HMM Match : MethyltransfD12 (HMM E-Value=2) 28 8.9
SB_43128| Best HMM Match : DUF713 (HMM E-Value=6.7) 28 8.9
SB_49098| Best HMM Match : Peptidase_M14 (HMM E-Value=4.5e-12) 28 8.9
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 127 bits (306), Expect = 1e-29
Identities = 69/175 (39%), Positives = 95/175 (54%), Gaps = 3/175 (1%)
Frame = +2
Query: 209 DVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALK---GIVKVGALD 379
DV L NFD+++ ++ I ++EF+APWCGHCKSL PEY KAA+ +K V +D
Sbjct: 62 DVSVLNSKNFDRVIEENNII-LVEFYAPWCGHCKSLAPEYAKAAKKMKLNDPPVPFAKMD 120
Query: 380 ADEHRSVSQKYGVTGFPTIKIFTGSKHTPYQGQRTAEGFVXXXXXXXXXXXXXNLXXXXX 559
A ++Q++ V+G+PT+KIF Y+G R G V
Sbjct: 121 ATVASDIAQRFDVSGYPTLKIFRKGTPYEYEGPREESGIVEYMK-----------KQSDP 169
Query: 560 XXXXXXXXVITLTDSNFKELVLDSDDLWLVEFYAPWCGHCKNLEPHWAKAATELK 724
+TLT NF E V++ + L LVEF+APWCGHCK L P + KAA EL+
Sbjct: 170 NWKPPPVAALTLTKENFTE-VVNRESLMLVEFFAPWCGHCKQLAPEYEKAAQELQ 223
Score = 93.1 bits (221), Expect = 2e-19
Identities = 43/96 (44%), Positives = 62/96 (64%), Gaps = 3/96 (3%)
Frame = +2
Query: 215 IELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALK---GIVKVGALDAD 385
+ LT NF ++V N + + ++EFFAPWCGHCK L PEY+KAA+ L+ + + +DA
Sbjct: 179 LTLTKENFTEVV-NRESLMLVEFFAPWCGHCKQLAPEYEKAAQELQKHDPPIPLAIVDAT 237
Query: 386 EHRSVSQKYGVTGFPTIKIFTGSKHTPYQGQRTAEG 493
++QKY V G+PT+K+F K T Y+GQR G
Sbjct: 238 IESELAQKYEVQGYPTLKVFRKGKATEYKGQRDQYG 273
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Frame = +2
Query: 236 FDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKG--IVKVGALDADEHRSVSQK 409
FD++V + + +IEF+APWCG +L P +KK + + + + +DA + V
Sbjct: 535 FDEIVNDPKKDVLIEFYAPWCG--IALEPTFKKLGKHFRNDKNIVIAKIDATAN-DVPST 591
Query: 410 YGVTGFPTIKIFT 448
Y V GFPTI T
Sbjct: 592 YAVEGFPTIYFAT 604
Score = 35.1 bits (77), Expect = 0.058
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +2
Query: 584 VITLTDSNFKELVLDSDDLWLVEFYAPWCGHCKNLEPHWAK 706
V + F E+V D L+EFYAPWCG LEP + K
Sbjct: 527 VTVVVGKTFDEIVNDPKKDVLIEFYAPWCGIA--LEPTFKK 565
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 120 bits (290), Expect = 9e-28
Identities = 56/105 (53%), Positives = 73/105 (69%), Gaps = 5/105 (4%)
Frame = +2
Query: 200 SSSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALD 379
+ DV+ELT +NF+K V NS ++W++EFFAPWCGHC+ L PE+ KAA LKG VKVGALD
Sbjct: 77 NKEDVVELTDTNFEKEVLNSKDLWLVEFFAPWCGHCQRLAPEWAKAATELKGKVKVGALD 136
Query: 380 ADEHRSVSQKYGVTGFPTIKIF-TGSKHT----PYQGQRTAEGFV 499
A H + +Y V G+PTIK+F G K++ YQG RTA +
Sbjct: 137 ATVHTVTASRYQVQGYPTIKVFAAGIKNSHSVEDYQGGRTASDII 181
Score = 109 bits (261), Expect = 3e-24
Identities = 57/126 (45%), Positives = 71/126 (56%), Gaps = 12/126 (9%)
Frame = +2
Query: 383 DEHRSVSQKYGVTGFPTIKIFTGSKHTP--YQGQRTAEGFVXXXXXXXXXXXXXNLXXXX 556
D H+SV Y + GFPTIKIF +K++P Y GQRTA+G V +
Sbjct: 2 DVHQSVGGPYNIRGFPTIKIFGANKNSPQDYNGQRTAQGIVDAAMRAAQEAVSQRMSGGG 61
Query: 557 XXXXXXXXX----------VITLTDSNFKELVLDSDDLWLVEFYAPWCGHCKNLEPHWAK 706
V+ LTD+NF++ VL+S DLWLVEF+APWCGHC+ L P WAK
Sbjct: 62 RSSSGGGGRRGGSGGNKEDVVELTDTNFEKEVLNSKDLWLVEFFAPWCGHCQRLAPEWAK 121
Query: 707 AATELK 724
AATELK
Sbjct: 122 AATELK 127
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 95.9 bits (228), Expect = 3e-20
Identities = 51/119 (42%), Positives = 69/119 (57%), Gaps = 6/119 (5%)
Frame = +2
Query: 161 ILLCATGSLALYDS---SSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYK 331
+LL A SLA + DV+ LT NFD+ V + + ++EF+APWCGHCK+L PEY
Sbjct: 6 VLLLALVSLAYSEEIKEEEDVLVLTEKNFDEAVAANKHV-LVEFYAPWCGHCKALAPEYA 64
Query: 332 KAARAL---KGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSKHTPYQGQRTAEGFV 499
KAA L K +K+ +DA + +K+ V G+PTIK F K + Y G RTA V
Sbjct: 65 KAAGQLKSEKSEIKLAKVDATAETKLGEKFQVQGYPTIKFFKDGKPSEYAGGRTAPEIV 123
Score = 66.5 bits (155), Expect = 2e-11
Identities = 35/100 (35%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Frame = +2
Query: 203 SSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDA 382
S V L NFD++ N D+ +EF+APWCGHCK L P + + K +
Sbjct: 383 SKPVKVLCGKNFDEVARNKDKNVFVEFYAPWCGHCKQLAPIWDQLGEKYKDHADIVVAKM 442
Query: 383 DEHRSVSQKYGVTGFPTIKIF-TGSKHTPYQGQRTAEGFV 499
D + + V FPTIK F + Y G RT + FV
Sbjct: 443 DSTANEVEGVKVHSFPTIKYFPKEGEAVDYNGGRTLDDFV 482
Score = 61.7 bits (143), Expect = 6e-10
Identities = 28/47 (59%), Positives = 34/47 (72%)
Frame = +2
Query: 584 VITLTDSNFKELVLDSDDLWLVEFYAPWCGHCKNLEPHWAKAATELK 724
V+ LT+ NF E V + + LVEFYAPWCGHCK L P +AKAA +LK
Sbjct: 26 VLVLTEKNFDEAVAANKHV-LVEFYAPWCGHCKALAPEYAKAAGQLK 71
Score = 52.0 bits (119), Expect = 5e-07
Identities = 22/47 (46%), Positives = 26/47 (55%)
Frame = +2
Query: 584 VITLTDSNFKELVLDSDDLWLVEFYAPWCGHCKNLEPHWAKAATELK 724
V L NF E+ + D VEFYAPWCGHCK L P W + + K
Sbjct: 386 VKVLCGKNFDEVARNKDKNVFVEFYAPWCGHCKQLAPIWDQLGEKYK 432
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 92.7 bits (220), Expect = 3e-19
Identities = 49/104 (47%), Positives = 62/104 (59%), Gaps = 5/104 (4%)
Frame = +2
Query: 203 SSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALK---GIVKVGA 373
SSDV++L SNF V D I ++EFFAPWCGHCK L PEY+ AA ALK V +
Sbjct: 537 SSDVLDLGDSNFKSGVAGKD-IMLVEFFAPWCGHCKRLAPEYETAAEALKKNDPPVPLAK 595
Query: 374 LDADE-HRSVSQKYGVTGFPTIKIF-TGSKHTPYQGQRTAEGFV 499
+D E + KYGV+G+PT+KIF G Y G R + G +
Sbjct: 596 VDCTEAGKDTCSKYGVSGYPTLKIFRNGEMSKDYDGPRDSSGII 639
Score = 58.0 bits (134), Expect = 7e-09
Identities = 27/47 (57%), Positives = 31/47 (65%)
Frame = +2
Query: 584 VITLTDSNFKELVLDSDDLWLVEFYAPWCGHCKNLEPHWAKAATELK 724
V+ L DSNFK V D + LVEF+APWCGHCK L P + AA LK
Sbjct: 540 VLDLGDSNFKSGVAGKD-IMLVEFFAPWCGHCKRLAPEYETAAEALK 585
Score = 57.2 bits (132), Expect = 1e-08
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Frame = +2
Query: 140 LHGYFIGILLCATGSLALYDSSSDVIELTPS-NFDKLVTNSDEIWIIEFFAPWCGHCKSL 316
L YF G L S L +S+ +++ NF ++V + + +IEF+APWCGHCKSL
Sbjct: 839 LEDYFAGSLKPHIKSEPLPESNDGPVKVVVGENFKEIVNDPTKDVLIEFYAPWCGHCKSL 898
Query: 317 VPEYKKAARALKGI--VKVGALDADEHRSVSQKYGVTGFPTIKI 442
P+Y + L+ + + + +DA + + V G I I
Sbjct: 899 EPKYNELGEKLQDVKDIVIAKMDATAN-DAPPNFSVQGIIIISI 941
Score = 55.2 bits (127), Expect = 5e-08
Identities = 23/47 (48%), Positives = 31/47 (65%)
Frame = +2
Query: 584 VITLTDSNFKELVLDSDDLWLVEFYAPWCGHCKNLEPHWAKAATELK 724
V + NFKE+V D L+EFYAPWCGHCK+LEP + + +L+
Sbjct: 864 VKVVVGENFKEIVNDPTKDVLIEFYAPWCGHCKSLEPKYNELGEKLQ 910
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 86.2 bits (204), Expect = 2e-17
Identities = 42/100 (42%), Positives = 58/100 (58%), Gaps = 4/100 (4%)
Frame = +2
Query: 212 VIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARAL--KGIVKVGALDAD 385
VI+LT NFD++V N ++ ++EF+APWCGHCK L P Y++ A V + +DAD
Sbjct: 24 VIDLTKDNFDEVV-NGEKFALVEFYAPWCGHCKQLAPTYEQLGEAYTQSSDVIIAKVDAD 82
Query: 386 EHRSVSQKYGVTGFPTIKIFTGSKHTP--YQGQRTAEGFV 499
R + ++ V GFPTIK F TP Y G R F+
Sbjct: 83 GDRDLGSRFDVKGFPTIKYFPKGSTTPEEYNGGRDINDFI 122
Score = 52.0 bits (119), Expect = 5e-07
Identities = 23/37 (62%), Positives = 26/37 (70%)
Frame = +2
Query: 584 VITLTDSNFKELVLDSDDLWLVEFYAPWCGHCKNLEP 694
VI LT NF E+V + + LVEFYAPWCGHCK L P
Sbjct: 24 VIDLTKDNFDEVV-NGEKFALVEFYAPWCGHCKQLAP 59
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 83.8 bits (198), Expect = 1e-16
Identities = 55/179 (30%), Positives = 83/179 (46%), Gaps = 3/179 (1%)
Frame = +2
Query: 197 DSSSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVG-- 370
D+ S+V+ L FD V + + ++ F+APWCGHCK++ PEY AA+ LK G
Sbjct: 79 DTPSEVVHLRDDMFDDFVAKNPSV-LVMFYAPWCGHCKAMKPEYVDAAQTLKEQEIPGVL 137
Query: 371 -ALDADEHRSVSQKYGVTGFPTIKIFTGSKHTPYQGQRTAEGFVXXXXXXXXXXXXXNLX 547
A+DA + ++ +++ V G+PT G++ + Y + +
Sbjct: 138 AAVDATKEAALGKRFKVEGYPTGLSPNGTRPSFYLFTSSPK-------------EPPRPP 184
Query: 548 XXXXXXXXXXXXVITLTDSNFKELVLDSDDLWLVEFYAPWCGHCKNLEPHWAKAATELK 724
V L+D+ FK V + LV FYAPWCGHCK +P AA K
Sbjct: 185 PPEQEWSEIPSEVYHLSDTTFKSFVKKKKHV-LVMFYAPWCGHCKKAKPELMSAAKHHK 242
Score = 31.5 bits (68), Expect = 0.72
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 644 LVEFYAPWCGHCKNLEPHWAKAATELK 724
++ Y CG+CK +P +A AATE K
Sbjct: 3 VIVLYIAGCGYCKRFKPEFAAAATEHK 29
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 74.9 bits (176), Expect = 6e-14
Identities = 37/105 (35%), Positives = 63/105 (60%), Gaps = 5/105 (4%)
Frame = +2
Query: 200 SSSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARAL--KGIVKVGA 373
S++ V +L NFD+++ D I +++F+APWC HC+ L+P+ + AA AL KG+ +
Sbjct: 18 SANFVYDLNAQNFDQMIREKD-IMLVDFYAPWCHHCQELLPQLEGAANALAAKGLFQFAK 76
Query: 374 LDADEHRS--VSQKYGVTGFPTIKIFTGSKHT-PYQGQRTAEGFV 499
+D + RS + + + G+P++K+F K+ Y GQRT V
Sbjct: 77 VDCTDPRSKVLCDNFKIEGYPSVKLFKFGKYAGDYIGQRTDAALV 121
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = +2
Query: 584 VITLTDSNFKELVLDSDDLWLVEFYAPWCGHCKNLEPHWAKAATEL 721
V L NF +++ + D + LV+FYAPWC HC+ L P AA L
Sbjct: 22 VYDLNAQNFDQMIREKD-IMLVDFYAPWCHHCQELLPQLEGAANAL 66
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 72.1 bits (169), Expect = 4e-13
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Frame = +2
Query: 203 SSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKG-IVKVGALD 379
SS+V L P +F VT+ + ++FFAPWC C L+PEY+KAAR+ G V G +D
Sbjct: 283 SSNVHALGPEDFPSSVTSPSRPFFVDFFAPWCPPCMRLLPEYRKAARSFVGKPVGFGTVD 342
Query: 380 ADEHRSVSQKYGVTGFPTIKIFTGSKHTPYQGQRTA 487
H + +Y + +PT ++ S+ + G A
Sbjct: 343 CTVHSQLCHQYNIRSYPTTILYNNSQPHQFIGHHNA 378
Score = 70.5 bits (165), Expect = 1e-12
Identities = 26/83 (31%), Positives = 50/83 (60%)
Frame = +2
Query: 206 SDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDAD 385
S V E+ NF V S++ W+++F+APWCG C P+Y++ A+ LKG V+ ++ +
Sbjct: 433 SIVSEVNSKNFFTDVLASEDAWVVDFYAPWCGPCMRFAPKYEQLAKMLKGKVRAAKVNCE 492
Query: 386 EHRSVSQKYGVTGFPTIKIFTGS 454
+ + + + +PT++++ GS
Sbjct: 493 QDYGLCSEANIHSYPTVRLYLGS 515
Score = 49.6 bits (113), Expect = 3e-06
Identities = 21/47 (44%), Positives = 27/47 (57%)
Frame = +2
Query: 584 VITLTDSNFKELVLDSDDLWLVEFYAPWCGHCKNLEPHWAKAATELK 724
V + NF VL S+D W+V+FYAPWCG C P + + A LK
Sbjct: 435 VSEVNSKNFFTDVLASEDAWVVDFYAPWCGPCMRFAPKYEQLAKMLK 481
Score = 34.7 bits (76), Expect = 0.077
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 584 VITLTDSNFKELVLDSDDLWLVEFYAPWCGHCKNLEPHWAKAA 712
V L +F V + V+F+APWC C L P + KAA
Sbjct: 286 VHALGPEDFPSSVTSPSRPFFVDFFAPWCPPCMRLLPEYRKAA 328
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 70.1 bits (164), Expect = 2e-12
Identities = 29/86 (33%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Frame = +2
Query: 206 SDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARAL---KGIVKVGAL 376
S V+ LT + D+ + + + + ++ +FAPWCGHC + P Y KAA+ L + A+
Sbjct: 50 SKVVFLTDESHDEFIKSHENV-LVMYFAPWCGHCNEMKPNYYKAAQVLHDEDANCNLAAV 108
Query: 377 DADEHRSVSQKYGVTGFPTIKIFTGS 454
D +H+ V++K + G+PT+K++ S
Sbjct: 109 DCTKHKDVAKKVALAGYPTVKLYKAS 134
Score = 65.7 bits (153), Expect = 4e-11
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Frame = +2
Query: 197 DSSSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVK--VG 370
+ SS V +L S+F + N++ + ++ F+APWCGHCK+ P+Y+KAA K
Sbjct: 144 EDSSLVKQLDGSDFWGYLNNTEHV-LVMFYAPWCGHCKNAKPKYEKAAETFKDQPNRVFA 202
Query: 371 ALDADEHRSVSQKYGVTGFPTIKIFTGSKH-TPYQGQRTAEGFV 499
LD + V K V G+PT++ + K Y G R E +
Sbjct: 203 KLDCTKFGDVCDKEEVNGYPTLRYYLYGKFVVEYDGDRVTEDLI 246
Score = 47.6 bits (108), Expect = 1e-05
Identities = 19/46 (41%), Positives = 31/46 (67%)
Frame = +2
Query: 584 VITLTDSNFKELVLDSDDLWLVEFYAPWCGHCKNLEPHWAKAATEL 721
V+ LTD + E + +++ LV ++APWCGHC ++P++ KAA L
Sbjct: 52 VVFLTDESHDEFIKSHENV-LVMYFAPWCGHCNEMKPNYYKAAQVL 96
Score = 47.6 bits (108), Expect = 1e-05
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = +2
Query: 623 LDSDDLWLVEFYAPWCGHCKNLEPHWAKAATELK 724
L++ + LV FYAPWCGHCKN +P + KAA K
Sbjct: 161 LNNTEHVLVMFYAPWCGHCKNAKPKYEKAAETFK 194
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 68.5 bits (160), Expect = 5e-12
Identities = 31/50 (62%), Positives = 36/50 (72%)
Frame = +2
Query: 203 SSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALK 352
SSDV++L SNF V D I ++EFFAPWCGHCK L PEY+ AA ALK
Sbjct: 12 SSDVLDLGDSNFKSGVAGKD-IMLVEFFAPWCGHCKRLAPEYETAAEALK 60
Score = 58.0 bits (134), Expect = 7e-09
Identities = 27/47 (57%), Positives = 31/47 (65%)
Frame = +2
Query: 584 VITLTDSNFKELVLDSDDLWLVEFYAPWCGHCKNLEPHWAKAATELK 724
V+ L DSNFK V D + LVEF+APWCGHCK L P + AA LK
Sbjct: 15 VLDLGDSNFKSGVAGKD-IMLVEFFAPWCGHCKRLAPEYETAAEALK 60
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 57.2 bits (132), Expect = 1e-08
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 13/114 (11%)
Frame = +2
Query: 197 DSSSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARAL----KGIVK 364
D ++EL SNF+ V + +++F+APWC HCK + P+YK A+ L V+
Sbjct: 131 DDEPTLLELDDSNFEPAVQKHKFV-LVDFYAPWCFHCKKMAPDYKDVAKELLILSHNSVR 189
Query: 365 VGALDADEH----RSVSQKYGVTGFPTIKIFTGSKHT-PYQG----QRTAEGFV 499
+ +D + + +KY V PTI +F K ++G +++ +GFV
Sbjct: 190 LAKVDCSANNMATKKTCKKYNVKFLPTIYLFHDGKFVEEFEGNNRNKKSIKGFV 243
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/47 (42%), Positives = 30/47 (63%)
Frame = +2
Query: 584 VITLTDSNFKELVLDSDDLWLVEFYAPWCGHCKNLEPHWAKAATELK 724
V+ L D NF E + ++ + LV+FYAPWC C+ L P + AA +L+
Sbjct: 53 VLNLNDQNFNETIKKNEYV-LVDFYAPWCSDCQRLSPLFDTAALQLR 98
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = +2
Query: 584 VITLTDSNFKELVLDSDDLWLVEFYAPWCGHCKNLEPHWAKAATEL 721
++ L DSNF+ V LV+FYAPWC HCK + P + A EL
Sbjct: 136 LLELDDSNFEPAV-QKHKFVLVDFYAPWCFHCKKMAPDYKDVAKEL 180
Score = 41.1 bits (92), Expect = 9e-04
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = +2
Query: 200 SSSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALK 352
+S V+ L NF++ + ++ + +++F+APWC C+ L P + AA L+
Sbjct: 49 ASPAVLNLNDQNFNETIKKNEYV-LVDFYAPWCSDCQRLSPLFDTAALQLR 98
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 53.6 bits (123), Expect = 2e-07
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Frame = +2
Query: 212 VIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGI--VKVGALDAD 385
V E+T +FD +V N+D+ ++ F+ PWCG C + P AR + I V V +DAD
Sbjct: 519 VTEVTTDSFDDIVINNDQDVLLVFYTPWCGMCINFAPVLLAVARFFQDISQVSVTRIDAD 578
Query: 386 EHRSVSQKYGVTGFPTIKIFTGSK 457
++ + V+ +P+I +F +
Sbjct: 579 QN-DLPWNLTVSSYPSIILFPAGR 601
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 584 VITLTDSNFKELVLDSDDLWLVEFYAPWCGHCKNLEP 694
V +T +F ++V+++D L+ FY PWCG C N P
Sbjct: 519 VTEVTTDSFDDIVINNDQDVLLVFYTPWCGMCINFAP 555
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 52.4 bits (120), Expect = 4e-07
Identities = 26/87 (29%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Frame = +2
Query: 212 VIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARAL----KGIVKVGALD 379
+ ELT +FD + + E+ +++F+APWC C +L P+Y+KAAR L K ++ ++
Sbjct: 24 IFELTDQDFDNFLKDK-EVMLVDFYAPWCSDCDNLRPKYEKAARDLAKEHKFVMAKALMN 82
Query: 380 ADEHRSVSQKYGVTGFPTIKIFTGSKH 460
+ ++ GV + T+ +T H
Sbjct: 83 TNSTQTTCLPMGVHYWRTLLAYTIGVH 109
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/46 (45%), Positives = 29/46 (63%)
Frame = +2
Query: 584 VITLTDSNFKELVLDSDDLWLVEFYAPWCGHCKNLEPHWAKAATEL 721
+ LTD +F + D + + LV+FYAPWC C NL P + KAA +L
Sbjct: 24 IFELTDQDFDNFLKDKE-VMLVDFYAPWCSDCDNLRPKYEKAARDL 68
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 49.6 bits (113), Expect = 3e-06
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +2
Query: 212 VIELTPSNFDKLVTNSD-EIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADE 388
V+EL S F +TN+ ++ + +F A WCG CKS+ P Y + K V + +D D
Sbjct: 11 VLELD-SQFTAELTNAGTKLVVADFTASWCGPCKSIAPVYSGLSEKYKQAVFL-KIDVDV 68
Query: 389 HRSVSQKYGVTGFPTIKIF 445
+ ++ K GVT PT + F
Sbjct: 69 CQELAAKQGVTAMPTFQFF 87
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 599 DSNFK-ELVLDSDDLWLVEFYAPWCGHCKNLEPHWAKAATELK 724
DS F EL L + +F A WCG CK++ P ++ + + K
Sbjct: 15 DSQFTAELTNAGTKLVVADFTASWCGPCKSIAPVYSGLSEKYK 57
>SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)
Length = 186
Score = 45.6 bits (103), Expect = 4e-05
Identities = 36/139 (25%), Positives = 55/139 (39%)
Frame = +2
Query: 308 KSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSKHTPYQGQRTA 487
++L +Y K R L I KV D ++ K + +PT+K++ Y G+R A
Sbjct: 6 EALGEQYSKEKRDLT-IAKV---DCTSDVNLCVKQNIRAYPTMKLYYDGDIKRYTGRRNA 61
Query: 488 EGFVXXXXXXXXXXXXXNLXXXXXXXXXXXXXVITLTDSNFKELVLDSDDLWLVEFYAPW 667
E + ++T + K + L L V+FYAPW
Sbjct: 62 EDMKVFVDKIVLKPEGKSKDSEGLSTSEAGVHILTKNTFD-KHIELG---LHFVKFYAPW 117
Query: 668 CGHCKNLEPHWAKAATELK 724
C HC L P W + A + K
Sbjct: 118 CIHCIKLAPIWERLAEDFK 136
Score = 41.1 bits (92), Expect = 9e-04
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Frame = +2
Query: 182 SLALYDSSSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIV 361
S L S + V LT + FDK + + ++F+APWC HC L P +++ A K
Sbjct: 82 SEGLSTSEAGVHILTKNTFDKHIELG--LHFVKFYAPWCIHCIKLAPIWERLAEDFKD-- 137
Query: 362 KVGALDADEHRSVSQKYGVTGFPTIKIF-TGSKHTPYQGQR 481
+AD ++S+ + G+PT+ +F G + Y G R
Sbjct: 138 -----NAD--ITISK---INGYPTLMLFKDGVQKKEYSGNR 168
>SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19)
Length = 335
Score = 44.4 bits (100), Expect = 1e-04
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
Frame = +2
Query: 182 SLALYDSSS----DVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAAR-- 343
SL ++ S+S ++E T N D+ V S ++I F+APW HC+ ++ + + A
Sbjct: 14 SLTIFTSTSVHCKKIVEFTNENVDEYVDGSKFVFIF-FYAPWDDHCQRILQIFDQVADEF 72
Query: 344 ALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSKHT--PYQGQRTAEGFV 499
A + + VG +A E ++ +Y + +P + F T Y G + F+
Sbjct: 73 ADRDDIVVGKSNAYEDVKIATRYWIDRYPMFRYFIKGSTTEETYDGGFKPDDFI 126
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +2
Query: 584 VITLTDSNFKELVLDSDDLWLVEFYAPWCGHCKNLEPHWAKAATE 718
++ T+ N E V D + FYAPW HC+ + + + A E
Sbjct: 28 IVEFTNENVDEYV-DGSKFVFIFFYAPWDDHCQRILQIFDQVADE 71
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +2
Query: 230 SNFDKLVTNS-DEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADE 388
+ F+ ++ N+ D++ +I+F+A WCG C+ + P++KK A V +D DE
Sbjct: 19 AEFNSVINNTKDKLVVIDFYAEWCGPCRQIKPKFKKMALEEFKDVFFAKIDVDE 72
Score = 37.9 bits (84), Expect = 0.008
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2
Query: 632 DDLWLVEFYAPWCGHCKNLEPHWAKAATE 718
D L +++FYA WCG C+ ++P + K A E
Sbjct: 30 DKLVVIDFYAEWCGPCRQIKPKFKKMALE 58
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/50 (38%), Positives = 32/50 (64%)
Frame = +2
Query: 236 FDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDAD 385
FDK + ++ E+ I+F A WCG C+ + P++++ A+ KG VK +D D
Sbjct: 4 FDKFLKDN-EVAAIDFTATWCGPCRMIGPKFEEMAKEFKG-VKCAKVDVD 51
Score = 31.1 bits (67), Expect = 0.95
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 623 LDSDDLWLVEFYAPWCGHCKNLEPHWAKAATELK 724
L +++ ++F A WCG C+ + P + + A E K
Sbjct: 8 LKDNEVAAIDFTATWCGPCRMIGPKFEEMAKEFK 41
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +2
Query: 272 IIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIF 445
+I+F A WCG CKS+ P + + +V + +D D+ + ++ G+ PT +
Sbjct: 32 VIDFTATWCGPCKSIAPVFTNLSMKFMDVVFL-KVDVDQCQLTAESCGIRAMPTFHFY 88
Score = 31.1 bits (67), Expect = 0.95
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +2
Query: 584 VITLTDSNFKELVLD--SDDLWLVEFYAPWCGHCKNLEP 694
VI + D +F + ++ L +++F A WCG CK++ P
Sbjct: 10 VIVVEDDSFFSVEIERAGSRLVVIDFTATWCGPCKSIAP 48
>SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058)
Length = 664
Score = 36.3 bits (80), Expect = 0.025
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +2
Query: 281 FFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIF 445
F+APWCG + V E+ AA L G V A++ S +KY + FP ++
Sbjct: 459 FYAPWCGQSRRAVEEFNIAASLLYGKVTFIAINC-WAGSCREKYTLDSFPKFFVY 512
>SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05)
Length = 215
Score = 34.3 bits (75), Expect = 0.10
Identities = 11/32 (34%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 224 TPSNFDKLVTNSDEIW-IIEFFAPWCGHCKSL 316
T ++FD+++++S + ++ FFAPW HC +
Sbjct: 8 TVTDFDRILSSSSNVLAVVHFFAPWAPHCNQM 39
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 590 TLTDSNFKELVLDSDDLWLVEFYAPWCGHCKNLEPHWAKAATE 718
T+TD + + L S+ L +V F+APW HC + + A E
Sbjct: 8 TVTDFD-RILSSSSNVLAVVHFFAPWAPHCNQMNDVLEELAKE 49
>SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 33.5 bits (73), Expect = 0.18
Identities = 17/57 (29%), Positives = 23/57 (40%)
Frame = +2
Query: 287 APWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSK 457
A WC CK L P G V + +D D ++ +GV PT+ G K
Sbjct: 46 ACWCNPCKVLTPRLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGK 102
>SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 33.1 bits (72), Expect = 0.24
Identities = 16/55 (29%), Positives = 22/55 (40%)
Frame = +2
Query: 293 WCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSK 457
WC CK L P G V + +D D ++ +GV PT+ G K
Sbjct: 2 WCNPCKVLTPRLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGK 56
>SB_6800| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 31.9 bits (69), Expect = 0.54
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Frame = +1
Query: 34 RVYFTYLSYTL*CAVNLDLNKFYNRLFINSVKFHNVTRIFYRYLALCNGVLGPLRFVF-- 207
RVY+ YLS + + F N I+S + H+ +R++YRYL+ N +L F
Sbjct: 31 RVYYKYLSNRISKFFASSFHTFENLRRISSDR-HSFSRVYYRYLS--NRILKFFASSFHT 87
Query: 208 ----RRYRADTE*FRQISYKFRRN 267
RR +D F ++ YK+ N
Sbjct: 88 FENLRRISSDRHSFSRVYYKYLSN 111
>SB_28982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1287
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 269 WIIEFFAPWCGHCKSLVPEYKKAARALKGIVKV 367
++IE F P C H + LVP K A + G++ +
Sbjct: 914 YVIEPFFPHCSHREDLVPVIKILAASALGVITI 946
>SB_55515| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 29.1 bits (62), Expect = 3.8
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = +1
Query: 34 RVYFTYLSYTL*CAVNLDLNKFYNRLFINSVKFHNVTRIFYRYLALCNGVLGPLRF---- 201
RVY+ YLS + + F N I+S + H+ +R++Y+YL+ F
Sbjct: 103 RVYYKYLSNRISKFFASSFHTFENLRRISSDR-HSFSRVYYKYLSNRISKFFASSFHTSE 161
Query: 202 VFRRYRADTE*FRQISYKFRRN 267
RR +D F ++ YK+ N
Sbjct: 162 NLRRISSDRHSFSRVYYKYLSN 183
>SB_43183| Best HMM Match : MethyltransfD12 (HMM E-Value=2)
Length = 604
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +1
Query: 34 RVYFTYLSYTL*CAVNLDLNKFYNRLFINSVKFHNVTRIFYRYLA 168
RVY+ YLS + + F N I+S + H+ +R++Y+YL+
Sbjct: 168 RVYYKYLSNRISKFFASSFHTFENLRRISSDR-HSFSRVYYKYLS 211
>SB_43128| Best HMM Match : DUF713 (HMM E-Value=6.7)
Length = 251
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +1
Query: 34 RVYFTYLSYTL*CAVNLDLNKFYNRLFINSVKFHNVTRIFYRYLA 168
RVY+ YLS + + F N I+S + H+ +R++Y+YL+
Sbjct: 177 RVYYKYLSNRISKFFASSFHTFENLRRISSDR-HSFSRVYYKYLS 220
>SB_49098| Best HMM Match : Peptidase_M14 (HMM E-Value=4.5e-12)
Length = 290
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 281 FFAPWCGHCKSLVPEYKKAARALKGIVK 364
+ +PW G K P Y++ ARA+ +VK
Sbjct: 52 WMSPW-GFTKKFPPNYRRHARAMNAVVK 78
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,830,201
Number of Sequences: 59808
Number of extensions: 434294
Number of successful extensions: 1022
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1006
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1937927537
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -