Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8f14
(732 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine hydroxy... 23 1.9
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 23 2.5
AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger tran... 23 2.5
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 23 3.4
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 23 3.4
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 23 3.4
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 23 3.4
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 23 3.4
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 23 3.4
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 23 3.4
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 22 4.4
DQ855490-1|ABH88177.1| 133|Tribolium castaneum chemosensory pro... 22 5.9
AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory recept... 22 5.9
AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory recept... 22 5.9
DQ855497-1|ABH88184.1| 127|Tribolium castaneum chemosensory pro... 21 7.8
AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxida... 21 7.8
AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory recept... 21 7.8
AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory recept... 21 7.8
>EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine
hydroxylase protein.
Length = 532
Score = 23.4 bits (48), Expect = 1.9
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +3
Query: 63 RHRSTPYERPTLEDLHRQL 119
RH++TPY P + +H L
Sbjct: 345 RHKNTPYHTPEPDCIHELL 363
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 26 NKQNAKGHQQSPPPPVY 76
N N+K Q S PP +Y
Sbjct: 185 NNNNSKSSQSSNPPQIY 201
>AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger
transcription factor protein.
Length = 228
Score = 23.0 bits (47), Expect = 2.5
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +1
Query: 466 SFTRKLKKEF--RPCSNIKTLSKCYKNGA*LVSKTATT 573
+FT + K F R +NI ++S+C NG +++K T
Sbjct: 19 AFTCEGCKSFFGRTYNNISSISECKNNGECVINKKNRT 56
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.4
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 26 NKQNAKGHQQSPPPPVY 76
N N+K Q S PP +Y
Sbjct: 185 NNNNSKSGQSSNPPQIY 201
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 22.6 bits (46), Expect = 3.4
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 26 NKQNAKGHQQSPPPPVY 76
N N+K Q S PP +Y
Sbjct: 185 NNNNSKSGQSSNPPQIY 201
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.4
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 26 NKQNAKGHQQSPPPPVY 76
N N+K Q S PP +Y
Sbjct: 185 NNNNSKSGQSSNPPQIY 201
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 22.6 bits (46), Expect = 3.4
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 26 NKQNAKGHQQSPPPPVY 76
N N+K Q S PP +Y
Sbjct: 185 NNNNSKSGQSSNPPQIY 201
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 22.6 bits (46), Expect = 3.4
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 26 NKQNAKGHQQSPPPPVY 76
N N+K Q S PP +Y
Sbjct: 141 NNNNSKSGQSSNPPQIY 157
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.4
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 26 NKQNAKGHQQSPPPPVY 76
N N+K Q S PP +Y
Sbjct: 185 NNNNSKSGQSSNPPQIY 201
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.4
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 26 NKQNAKGHQQSPPPPVY 76
N N+K Q S PP +Y
Sbjct: 185 NNNNSKSGQSSNPPQIY 201
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 22.2 bits (45), Expect = 4.4
Identities = 7/23 (30%), Positives = 12/23 (52%)
Frame = -1
Query: 609 LFLPDSPYLCHNCCRCFRH*SRS 541
++ D Y+CH CC S++
Sbjct: 641 MYAADVFYICHVCCSTIHEVSKA 663
>DQ855490-1|ABH88177.1| 133|Tribolium castaneum chemosensory
protein 4 protein.
Length = 133
Score = 21.8 bits (44), Expect = 5.9
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +3
Query: 213 ELKKEPVINFKFECSVCFETYSQQSNDTCPFLIPTTCDH 329
ELKK + +CS C E + S+ +LI D+
Sbjct: 64 ELKKNMPDAIETDCSKCSEKQKEGSDFIMRYLIDNKPDY 102
>AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory receptor
candidate 39 protein.
Length = 427
Score = 21.8 bits (44), Expect = 5.9
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -2
Query: 431 PHFYLGIAQWT 399
PHF L +A WT
Sbjct: 132 PHFLLPVAAWT 142
>AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory receptor
candidate 10 protein.
Length = 437
Score = 21.8 bits (44), Expect = 5.9
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -2
Query: 431 PHFYLGIAQWT 399
PHF L +A WT
Sbjct: 132 PHFLLPVAAWT 142
>DQ855497-1|ABH88184.1| 127|Tribolium castaneum chemosensory
protein 11 protein.
Length = 127
Score = 21.4 bits (43), Expect = 7.8
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +3
Query: 210 AELKKEPVINFKFECSVCFETYSQQSNDTCPFLI 311
AELK+ ECS C ET S LI
Sbjct: 61 AELKRHLPDALHTECSKCSETQKNGSKKIMRHLI 94
>AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxidase
subunit 2 protein.
Length = 683
Score = 21.4 bits (43), Expect = 7.8
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 133 SKASSNCLWRSSSVGRSYGVD 71
SK + N W+ S V S G+D
Sbjct: 443 SKNTFNTFWQQSDVDLSRGMD 463
>AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory receptor
candidate 49 protein.
Length = 418
Score = 21.4 bits (43), Expect = 7.8
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = -2
Query: 626 FSFQSNYFCLILHIYVTIVVAVFDT 552
FSF S + CL + Y + ++ T
Sbjct: 73 FSFMSRFLCLPFYSYFFYLSYIYTT 97
>AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory receptor
candidate 14 protein.
Length = 374
Score = 21.4 bits (43), Expect = 7.8
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = -2
Query: 626 FSFQSNYFCLILHIYVTIVVAVFDT 552
FSF S + CL + Y + ++ T
Sbjct: 29 FSFMSRFLCLPFYSYFFYLSYIYTT 53
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,066
Number of Sequences: 336
Number of extensions: 3720
Number of successful extensions: 34
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -