Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8f14
(732 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14) 38 0.006
SB_30772| Best HMM Match : zf-C3HC4 (HMM E-Value=2.4e-09) 36 0.026
SB_53608| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.045
SB_36193| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.045
SB_45619| Best HMM Match : M (HMM E-Value=0.01) 34 0.10
SB_5871| Best HMM Match : IBR (HMM E-Value=0.00018) 34 0.10
SB_56390| Best HMM Match : CHASE3 (HMM E-Value=0.042) 34 0.14
SB_6628| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 34 0.14
SB_15975| Best HMM Match : NHL (HMM E-Value=5e-09) 33 0.18
SB_42689| Best HMM Match : Spectrin (HMM E-Value=0) 33 0.24
SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11) 33 0.32
SB_42014| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.083) 32 0.42
SB_28014| Best HMM Match : HOOK (HMM E-Value=1.8e-13) 32 0.42
SB_7039| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.42
SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10) 32 0.42
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 32 0.42
SB_106| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.42
SB_18982| Best HMM Match : M (HMM E-Value=1.1e-06) 32 0.55
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_54221| Best HMM Match : zf-B_box (HMM E-Value=2.1e-17) 31 0.73
SB_27532| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.73
SB_280| Best HMM Match : MFS_1 (HMM E-Value=0.005) 31 0.73
SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.96
SB_56142| Best HMM Match : zf-B_box (HMM E-Value=2.9e-10) 31 0.96
SB_9795| Best HMM Match : FF (HMM E-Value=2.3e-33) 31 0.96
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 31 0.96
SB_14351| Best HMM Match : zf-B_box (HMM E-Value=2.3e-12) 31 0.96
SB_53688| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_48302| Best HMM Match : HORMA (HMM E-Value=1.1) 31 1.3
SB_47282| Best HMM Match : RCSD (HMM E-Value=0.53) 31 1.3
SB_17727| Best HMM Match : Exo_endo_phos (HMM E-Value=2.4e-12) 31 1.3
SB_11994| Best HMM Match : ERM (HMM E-Value=0.28) 31 1.3
SB_3992| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_54849| Best HMM Match : HORMA (HMM E-Value=0.54) 31 1.3
SB_30634| Best HMM Match : Apolipoprotein (HMM E-Value=0.16) 31 1.3
SB_55733| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00036) 30 1.7
SB_6618| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 30 1.7
SB_21143| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.42) 30 1.7
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 30 2.2
SB_11987| Best HMM Match : OTU (HMM E-Value=1.1e-24) 30 2.2
SB_5515| Best HMM Match : PspA_IM30 (HMM E-Value=0.14) 30 2.2
SB_32934| Best HMM Match : K_tetra (HMM E-Value=7.79963e-42) 29 2.9
SB_40923| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.29) 29 2.9
SB_33966| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_13020| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15) 29 2.9
SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016) 29 2.9
SB_5620| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_4328| Best HMM Match : Vicilin_N (HMM E-Value=0.39) 29 2.9
SB_7987| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_57688| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 29 3.9
SB_57045| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_33579| Best HMM Match : Laminin_G_2 (HMM E-Value=3.2e-34) 29 3.9
SB_30093| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 29 3.9
SB_14063| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 29 3.9
SB_9017| Best HMM Match : zf-C3HC4 (HMM E-Value=7.9e-12) 29 3.9
SB_56660| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 5.1
SB_32454| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_9664| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_9194| Best HMM Match : SWIM (HMM E-Value=0.01) 29 5.1
SB_43276| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 6.8
SB_3588| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_51757| Best HMM Match : Hormone_recep (HMM E-Value=6.4e-37) 28 6.8
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_36573| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_3354| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
>SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14)
Length = 1709
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/77 (27%), Positives = 43/77 (55%)
Frame = +3
Query: 501 VQQYKNIIKVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSDQVTSENRQL 680
++ Y++ IK L E+ + ++++ +NN + E K+ LE ELK ++++ ++
Sbjct: 1314 IESYEDKIKAL-EKEISNLKDRNNNGEKVQELLHKVTYLEGELKERSVETEKLKQTLQER 1372
Query: 681 IEENTRLNEQVQELQRQ 731
E+ RL E+ QE R+
Sbjct: 1373 EEQIERLKEEFQEKSRE 1389
>SB_30772| Best HMM Match : zf-C3HC4 (HMM E-Value=2.4e-09)
Length = 207
Score = 36.3 bits (80), Expect = 0.026
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +3
Query: 210 AELKK-EPVINFKFECSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVIDLQSNAMNIPH 386
+ LKK + +N + CSVC+E +S P + T C H FC +C+ + S H
Sbjct: 53 SSLKKLQRALNDELRCSVCYEVFSD------PRTL-TACLHSFCKECLHKMLSKRSKYIH 105
Query: 387 SIVCCPLCNTQVKMWR 434
CPLC + + R
Sbjct: 106 ----CPLCRKKTAVPR 117
>SB_53608| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 187
Score = 35.5 bits (78), Expect = 0.045
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Frame = +3
Query: 468 FYKKTQERVPAVQQYKNIIKVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKN- 644
F + + V + + N + + + VE+SD CD + ++ LE E++ EKN
Sbjct: 34 FLSRQESTVELISESVNELYDVVVNRRVEVEDSDATCDDEKSDIDDLLDLEGEIQKEKNI 93
Query: 645 HSD--QVTSENRQLIEEN 692
H+D V + LIEE+
Sbjct: 94 HADGCDVQKDTADLIEES 111
>SB_36193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 313
Score = 35.5 bits (78), Expect = 0.045
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Frame = +3
Query: 468 FYKKTQERVPAVQQYKNIIKVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKN- 644
F + + V + + N + + + VE+SD CD + ++ LE E++ EKN
Sbjct: 34 FLSRQESTVELISESVNELYDVVVNRRVEVEDSDATCDDEKSDIDDLLDLEGEIQKEKNI 93
Query: 645 HSD--QVTSENRQLIEEN 692
H+D V + LIEE+
Sbjct: 94 HADGCDVQKDTADLIEES 111
>SB_45619| Best HMM Match : M (HMM E-Value=0.01)
Length = 1315
Score = 34.3 bits (75), Expect = 0.10
Identities = 18/69 (26%), Positives = 40/69 (57%)
Frame = +3
Query: 525 KVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSDQVTSENRQLIEENTRLN 704
K +ERS + + +D + + ++ I AL + +NE++ +++TS+ L E+N RL
Sbjct: 543 KTEKERSGLENQLADLKLQL-ADEKSTIKALRKQQENERDTIERLTSDVNNLTEDNARLR 601
Query: 705 EQVQELQRQ 731
++ + L+ +
Sbjct: 602 KRCENLKEE 610
>SB_5871| Best HMM Match : IBR (HMM E-Value=0.00018)
Length = 843
Score = 34.3 bits (75), Expect = 0.10
Identities = 20/85 (23%), Positives = 35/85 (41%), Gaps = 3/85 (3%)
Frame = +3
Query: 252 CSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVIDLQSNAMNIPHSIVCCPLCNTQVKMW 431
C +C+ Y P ++ C H FC +C++ ++ + +V CP C + +
Sbjct: 330 CPLCYTAYGTGYPQRIPRILD--CSHTFCTECIMKIK----ELQGDVVECPTCKLRTLLT 383
Query: 432 RS---LKPNAVVTCKFYKKTQERVP 497
S LK N + + QE P
Sbjct: 384 SSVDCLKKNMDILTAVFAAEQEEEP 408
>SB_56390| Best HMM Match : CHASE3 (HMM E-Value=0.042)
Length = 440
Score = 33.9 bits (74), Expect = 0.14
Identities = 16/44 (36%), Positives = 29/44 (65%)
Frame = +3
Query: 594 NQAKIVALEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQELQ 725
+Q +I LEAEL +K +SD++ S +L + +L+E+V+ +Q
Sbjct: 223 SQGRIAQLEAELALQKKYSDELKSSQDELNDFVIQLDEEVEGMQ 266
>SB_6628| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 89
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +3
Query: 252 CSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVIDLQSNAMNIPHSIVCCPLCNTQVKMW 431
CS+C E + ND P ++P C H FC C+ +L ++ + CPLC + + W
Sbjct: 15 CSICIEHF----ND--PRVLP--CFHSFCRHCLEELAVHSEG--RGKLVCPLCKAEFQKW 64
>SB_15975| Best HMM Match : NHL (HMM E-Value=5e-09)
Length = 589
Score = 33.5 bits (73), Expect = 0.18
Identities = 34/145 (23%), Positives = 61/145 (42%), Gaps = 4/145 (2%)
Frame = +3
Query: 195 QQRMMAELKKEPVINFKFECSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVIDLQSNAM 374
++R AE VIN + C VC E + + P +P C H C KC L+ A
Sbjct: 4 KKREKAEKTLSGVINDECSCPVCLEDFLE------PKSLP-NCAHNVCRKC---LEGMAT 53
Query: 375 NIPHSIVCCPLCNTQVKM----WRSLKPNAVVTCKFYKKTQERVPAVQQYKNIIKVLQER 542
+ + CP+C + + L N ++ K + T R+ ++ + I V +E
Sbjct: 54 DSESKEIRCPVCRKESTLPEDGINGLPTNCLIV-KLLEATPGRIERLEIRRCIGAVKEE- 111
Query: 543 SVISVENSDNNCDINMENQAKIVAL 617
+ SV + +I + + + A+
Sbjct: 112 -IESVSRDERKLEIQKQERLERAAV 135
>SB_42689| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 1317
Score = 33.1 bits (72), Expect = 0.24
Identities = 19/74 (25%), Positives = 33/74 (44%)
Frame = +3
Query: 501 VQQYKNIIKVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSDQVTSENRQL 680
+Q +++ L E+ ++ E S + K A EAEL+ K DQ++ R L
Sbjct: 346 IQDAEDMYDWLNEKHQVASEESYRDLSNIQGKVMKHEAFEAELQANKERLDQISESGRDL 405
Query: 681 IEENTRLNEQVQEL 722
+E ++ EL
Sbjct: 406 ADEKPENKPEIDEL 419
>SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11)
Length = 1491
Score = 32.7 bits (71), Expect = 0.32
Identities = 13/47 (27%), Positives = 29/47 (61%)
Frame = +3
Query: 591 ENQAKIVALEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQELQRQ 731
E + KI L+ EL + +++ + ++I+EN LN+++ EL+++
Sbjct: 572 ELEKKIEELQDELDDVSTRRNELQKKQEKIIKENDELNDRINELKKE 618
>SB_42014| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.083)
Length = 1007
Score = 32.3 bits (70), Expect = 0.42
Identities = 16/47 (34%), Positives = 31/47 (65%)
Frame = +3
Query: 585 NMENQAKIVALEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQELQ 725
++EN +++AL+A+L+ K + ++ + + EEN RLNE ++ LQ
Sbjct: 550 SVENSEELIALKADLERAKYDNLKLANYRK---EENDRLNETIRTLQ 593
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/47 (29%), Positives = 29/47 (61%)
Frame = +3
Query: 585 NMENQAKIVALEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQELQ 725
N EN ++ ++A+L+ +++ ++ ++ EEN RLNE ++ LQ
Sbjct: 56 NYENSEHVLVVKADLERARDNYVKLANDRE---EENNRLNETIRALQ 99
>SB_28014| Best HMM Match : HOOK (HMM E-Value=1.8e-13)
Length = 725
Score = 32.3 bits (70), Expect = 0.42
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +3
Query: 558 ENSDNNCDINMENQAKIVALEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQELQRQ 731
EN N EN+ + L++ L + DQ+ ENR L + + +V +L+ Q
Sbjct: 620 ENKKLKAQKNDENEEQTQLLQSILNDANERKDQLEKENRSLNQRIMEMESEVDDLRNQ 677
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 618 EAELKNEKNHSDQVTSENRQLIEENTRLNEQVQELQ 725
E E K K + EN ++ +E L EQV+ELQ
Sbjct: 544 EFEAKKAKEKLVNLEGENERVKQEKENLREQVEELQ 579
>SB_7039| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 577
Score = 32.3 bits (70), Expect = 0.42
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = +3
Query: 252 CSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVIDLQSNAMNIPHSIVCCPLCN 413
C +C Y+Q+ P + +TC+H C +C+ + +N + CP C+
Sbjct: 76 CVICPVCYAQRPRSLFPDI--STCEHRSCIECLRQYMTIEINESRVNLTCPECS 127
>SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10)
Length = 2478
Score = 32.3 bits (70), Expect = 0.42
Identities = 21/82 (25%), Positives = 39/82 (47%)
Frame = +3
Query: 471 YKKTQERVPAVQQYKNIIKVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHS 650
YK+ E QQ+ +K +RS +EN N + +A++ ++AEL N KN
Sbjct: 1277 YKRMTEEKKQFQQHVASLKSESQRSKTLLENVRNEL---TKTKAELTKVQAELLNVKNDQ 1333
Query: 651 DQVTSENRQLIEENTRLNEQVQ 716
+ S+ + ++T + + Q
Sbjct: 1334 QKAQSQMEAIKSQSTSVEGKNQ 1355
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 32.3 bits (70), Expect = 0.42
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +3
Query: 552 SVENSDNNCDINMENQA-KIVALEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQELQR 728
++E +N +E+ A ++ +LE E KN +QVT + + E+ R +Q+ ELQR
Sbjct: 1955 TLEEKVSNDSYKLESAAGEVKSLERERSVLKNKLEQVTQKLCKESEDKARAQKQLGELQR 2014
Query: 729 Q 731
Q
Sbjct: 2015 Q 2015
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +3
Query: 537 ERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQ 716
E S I E ++N + + K+V+LE+E+K+ K ++ +E L E L E+++
Sbjct: 2043 ELSNIKEEFTENKTGVET-TEKKVVSLESEIKDYKQSIYRLGTEVESLARERDSLTEEIK 2101
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/76 (23%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Frame = +3
Query: 525 KVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSDQVTS--EN-----RQLI 683
++L+ S+ S++ + + + KI+ L++++ N++ QV +N R+
Sbjct: 998 RLLELESMYKAAKSESEANKEADRR-KIIKLQSQVDNQQKQLKQVQQRLDNTYEALRRTQ 1056
Query: 684 EENTRLNEQVQELQRQ 731
+EN L EQ++E+ R+
Sbjct: 1057 DENRNLTEQIEEVSRE 1072
>SB_106| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 32.3 bits (70), Expect = 0.42
Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +3
Query: 252 CSVCFETY-SQQSNDTCPFLIPTTCDHGFCFKCVIDLQSNAMNIPHSIVCCPLCNT 416
C+VC + S+ F I C H FC +C+ + + + CP+C T
Sbjct: 174 CAVCLDVVMSKPKQSERRFGILPNCIHAFCLECIRKWRKASHAEKKVVRACPICRT 229
>SB_18982| Best HMM Match : M (HMM E-Value=1.1e-06)
Length = 825
Score = 31.9 bits (69), Expect = 0.55
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +3
Query: 603 KIVALEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQELQ 725
+I AL L ++ +++++ ENR L EEN +L E+ + L+
Sbjct: 366 EIEALRKSLHEVEHENEELSDENRALDEENAKLTEEKRTLE 406
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 31.9 bits (69), Expect = 0.55
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +3
Query: 603 KIVALEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQELQ 725
+I AL L ++ +++++ ENR L EEN +L E+ + L+
Sbjct: 344 EIEALRKSLHEVEHENEELSDENRALDEENAKLTEEKRTLE 384
Score = 28.3 bits (60), Expect = 6.8
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = +3
Query: 504 QQYKNIIKVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSD---QVTSENR 674
Q+ K+ I L E S+ SV+ S CD+ +E + LE KNEK Q+ EN
Sbjct: 746 QEMKHKIHTLAE-SLKSVQESV--CDLEIERDNLQLDLEESKKNEKELRAVIVQLKRENS 802
Query: 675 QLIEENTRLNEQVQELQ 725
++ + N+ Q LQ
Sbjct: 803 STRDKLVKANDLAQTLQ 819
>SB_54221| Best HMM Match : zf-B_box (HMM E-Value=2.1e-17)
Length = 455
Score = 31.5 bits (68), Expect = 0.73
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +3
Query: 252 CSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVIDLQSNAMNIPHSIVCCPLCNTQVKM 428
CS+C E + ND P ++P C H FC C+ +L ++ + CPLC + ++
Sbjct: 15 CSICIEHF----ND--PRVLP--CFHSFCLHCLEELAVHSEG--RGKLVCPLCKAEFQI 63
>SB_27532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 649
Score = 31.5 bits (68), Expect = 0.73
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +3
Query: 252 CSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVIDLQSNAMNIPHSIVCCPLCNTQVKM 428
C VC Y P L+ C H FC +CV +L + +V CP C T++++
Sbjct: 20 CPVCLGEYKN------PMLL--RCYHSFCLRCVQELLHQSGE--KGVVKCPQCRTEMEI 68
>SB_280| Best HMM Match : MFS_1 (HMM E-Value=0.005)
Length = 480
Score = 31.5 bits (68), Expect = 0.73
Identities = 17/83 (20%), Positives = 38/83 (45%)
Frame = +3
Query: 471 YKKTQERVPAVQQYKNIIKVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHS 650
Y+K+ + K +I L++ + V S+NN + + K + A+ KN N
Sbjct: 132 YEKSANPEEDSNEEKGVIGSLKQNANYKVGKSENNSSRVFDGERKNIDKMADEKNANNEL 191
Query: 651 DQVTSENRQLIEENTRLNEQVQE 719
D++ + + +++ + V+E
Sbjct: 192 DEMVGSHAKKDSDSSSFTDNVKE 214
>SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1716
Score = 31.1 bits (67), Expect = 0.96
Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 4/87 (4%)
Frame = +3
Query: 321 CDHGFCFKCVIDLQSNAMNIPHSIVCCPLCNTQVKMWR---SLKPNAVVTCKFYKKTQER 491
C H FC C++ + + CP+C+T+V R +++P+ V+ YK
Sbjct: 1382 CLHSFCRSCIVSWLQASYH-------CPVCDTEVHKTRPFLNIRPDCVLQDIVYKLVPGL 1434
Query: 492 VPAVQQYKNIIKV-LQERSVISVENSD 569
Y+ K LQE VE D
Sbjct: 1435 YQRELNYREEFKTKLQENDPTRVEPKD 1461
>SB_56142| Best HMM Match : zf-B_box (HMM E-Value=2.9e-10)
Length = 691
Score = 31.1 bits (67), Expect = 0.96
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +3
Query: 294 TCPFLIPTTCDHGFCFKCVIDLQSNAMNIPHSIVCCPLCNTQVKM 428
T P L+P C H +C KC+ DL S + CP C +VK+
Sbjct: 24 TDPRLLP--CLHTYCKKCLEDLVSQCQK--KGEIYCPQCRHEVKI 64
>SB_9795| Best HMM Match : FF (HMM E-Value=2.3e-33)
Length = 693
Score = 31.1 bits (67), Expect = 0.96
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 624 ELKNEKNHSDQVTSENRQLIEENTRLNEQVQELQRQ 731
E K E +HSD+ TS +R +EN R E+ +E +++
Sbjct: 599 EEKEESSHSDEDTSRDRNREKENDREREKEREKEKE 634
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 31.1 bits (67), Expect = 0.96
Identities = 19/70 (27%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Frame = +3
Query: 534 QERSVISVENSDNNCDIN-MENQAKIVALEAELKNEKNHSDQ-VTSENRQLI---EENTR 698
+ER + + + ++ D+ E ++ A ++L+++ N D + S++R +I EEN +
Sbjct: 1989 KERDIEQLNSQISSGDVQGYEETEELKAQLSQLRDQNNKLDNDLASQSRDVITLKEENDK 2048
Query: 699 LNEQVQELQR 728
NE +++LQR
Sbjct: 2049 ANEVIKQLQR 2058
>SB_14351| Best HMM Match : zf-B_box (HMM E-Value=2.3e-12)
Length = 549
Score = 31.1 bits (67), Expect = 0.96
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +3
Query: 300 PFLIPTTCDHGFCFKCVIDLQSNAMNIPHSIVCCPLCNTQVKM-WRSLKPNAVVTCKFYK 476
P L+P C H C KC+ D++ + CP+C T V+ L PN + K +
Sbjct: 31 PRLLP--CLHSLCKKCLKDIE----QAQEGAIACPVCLTDVECHLEELLPNVLARSKLKE 84
Query: 477 K 479
+
Sbjct: 85 R 85
>SB_53688| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 491
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +3
Query: 468 FYKKTQERVPAVQQYKNIIKVLQERSVISVENSD-NNCDINMENQAKIVALEAELKNE-K 641
F+ K QE+V A +QY N + L +S +S +C N++ K++ + K + +
Sbjct: 233 FFSKNQEKVIAYKQYSNTLSHLLNKSKKEYFHSQFISCKNNLKATWKLIGKLIQRKTKGQ 292
Query: 642 NHSDQVTSENR 674
+ ++TS NR
Sbjct: 293 SAPSRITSGNR 303
>SB_48302| Best HMM Match : HORMA (HMM E-Value=1.1)
Length = 330
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +3
Query: 468 FYKKTQERVPAVQQYKNIIKVLQERSVISVENSD-NNCDINMENQAKIVALEAELKNE-K 641
F+ K QE+V A +QY N + L +S +S +C N++ K++ + K + +
Sbjct: 72 FFSKNQEKVIAYKQYSNTLSHLLNKSKKEYFHSQFISCKNNLKATWKLIGKLIQRKTKGQ 131
Query: 642 NHSDQVTSENR 674
+ ++TS NR
Sbjct: 132 SAPSRITSGNR 142
>SB_47282| Best HMM Match : RCSD (HMM E-Value=0.53)
Length = 264
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/43 (27%), Positives = 27/43 (62%)
Frame = +3
Query: 438 LKPNAVVTCKFYKKTQERVPAVQQYKNIIKVLQERSVISVENS 566
LKP ++ YK+ +E+ PA+ + +++K ++ +S S++ S
Sbjct: 120 LKPVSIPNRCDYKRDEEKAPAMNELGSLLKTMKSKSSYSLDKS 162
>SB_17727| Best HMM Match : Exo_endo_phos (HMM E-Value=2.4e-12)
Length = 648
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +3
Query: 468 FYKKTQERVPAVQQYKNIIKVLQERSVISVENSD-NNCDINMENQAKIVALEAELKNE-K 641
F+ K QE+V A +QY N + L +S +S +C N++ K++ + K + +
Sbjct: 404 FFSKNQEKVIAYKQYSNTLSHLLNKSKKEYFHSQFISCKNNLKATWKLIGKLIQRKTKGQ 463
Query: 642 NHSDQVTSENR 674
+ ++TS NR
Sbjct: 464 SAPSRITSGNR 474
>SB_11994| Best HMM Match : ERM (HMM E-Value=0.28)
Length = 465
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/43 (27%), Positives = 27/43 (62%)
Frame = +3
Query: 438 LKPNAVVTCKFYKKTQERVPAVQQYKNIIKVLQERSVISVENS 566
LKP ++ YK+ +E+ PA+ + +++K ++ +S S++ S
Sbjct: 321 LKPVSIPNRCDYKRDEEKAPAMNELGSLLKTMKSKSSYSLDKS 363
>SB_3992| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 354
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +3
Query: 468 FYKKTQERVPAVQQYKNIIKVLQERSVISVENSD-NNCDINMENQAKIVALEAELKNE-K 641
F+ K QE+V A +QY N + L +S +S +C N++ K++ + K + +
Sbjct: 6 FFSKNQEKVIAYKQYSNTLSHLLNKSKKEYFHSQFISCKNNLKATWKLIGKLIQRKTKGQ 65
Query: 642 NHSDQVTSENR 674
+ ++TS NR
Sbjct: 66 SAPSRITSGNR 76
>SB_54849| Best HMM Match : HORMA (HMM E-Value=0.54)
Length = 330
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +3
Query: 468 FYKKTQERVPAVQQYKNIIKVLQERSVISVENSD-NNCDINMENQAKIVALEAELKNE-K 641
F+ K QE+V A +QY N + L +S +S +C N++ K++ + K + +
Sbjct: 72 FFSKNQEKVIAYKQYSNTLSHLLNKSKKEYFHSQFISCKNNLKATWKLIGKLIQRKTKGQ 131
Query: 642 NHSDQVTSENR 674
+ ++TS NR
Sbjct: 132 SAPSRITSGNR 142
>SB_30634| Best HMM Match : Apolipoprotein (HMM E-Value=0.16)
Length = 558
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/76 (23%), Positives = 37/76 (48%)
Frame = +3
Query: 501 VQQYKNIIKVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSDQVTSENRQL 680
++ YK + L+ N++N + N+ QA++ L ELK + N + + E ++
Sbjct: 110 LKHYKQQTETLESLFAAVNHNNENLINENLLLQAELDNLNNELKAKDNKIESLQDELERM 169
Query: 681 IEENTRLNEQVQELQR 728
E T L +++ +R
Sbjct: 170 ENEKTELRVELRGAER 185
>SB_55733| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00036)
Length = 1211
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/69 (26%), Positives = 36/69 (52%)
Frame = +3
Query: 525 KVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSDQVTSENRQLIEENTRLN 704
K+ QE S +D NCDI +N+ +I L ++ + ++ + +L E + L
Sbjct: 380 KLKQEHSKCMDLYNDQNCDIMNKNE-EIEQLSVQVSKLTDQLEKGIDKYLKLEREASNLR 438
Query: 705 EQVQELQRQ 731
E++ EL+++
Sbjct: 439 EEIAELEQE 447
>SB_6618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 574
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 249 ECSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVID 356
+C VC + S+Q T P +C H FC +C+++
Sbjct: 101 QCPVCLMSLSEQKLGT-----PNSCMHVFCLECILE 131
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 30.3 bits (65), Expect = 1.7
Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 10/106 (9%)
Frame = +3
Query: 426 MWRSLKPNAVVTCKFYKKTQERVPA-VQQYKNIIKVLQERSVISVENSDNNCDI---NME 593
+W SL+ N + ++ +V A +++ +N + L+ + + D ME
Sbjct: 560 LWESLQHNDSRAVQKFQDFLTKVSAEIRRARNDSEQLETALKSKMNSHDTEVQKLYEEME 619
Query: 594 NQAKIVA------LEAELKNEKNHSDQVTSENRQLIEENTRLNEQV 713
Q K+V LE E+ ++ ++ +EN +L+E+N L EQ+
Sbjct: 620 QQIKVVRDTYQQELEDEIAMKEKGEQEIKTENEKLLEKNWTLEEQL 665
>SB_21143| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.42)
Length = 870
Score = 30.3 bits (65), Expect = 1.7
Identities = 25/125 (20%), Positives = 55/125 (44%), Gaps = 12/125 (9%)
Frame = +3
Query: 393 VCCPLCNTQVKMWRSLKPNAVVTCKFYKKTQERVPAVQQYKNIIKVLQERSVISVENSDN 572
V C C TQ + S A K ++ E + + + K+ + +++R + +
Sbjct: 201 VLCLKCGTQEAVLASSDATAKTISKITRERDELMDVLTKQKSSVSEVRKRELDAYTQVKK 260
Query: 573 NCDI----NMENQAKIV---ALEAELKNEKNHSDQVTSEN-----RQLIEENTRLNEQVQ 716
+C++ +E I+ L+ ELK + +Q E+ ++L + +RL E +
Sbjct: 261 SCELVEQAQLEKAQAIIQVQQLKEELKKQGERHEQYARESCNRAGQELEKAKSRLVEDID 320
Query: 717 ELQRQ 731
+L ++
Sbjct: 321 QLNKK 325
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 29.9 bits (64), Expect = 2.2
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Frame = +3
Query: 531 LQERSVISVENSDNNCD--INMENQAKIVALEAELKNEKNHSDQVTSENR---QLIEENT 695
L +R ++++ D D I++E K L+ E E+ H +V+ N+ QL EN
Sbjct: 51 LDDRGDLTLKRYDVAKDTIIDLETAYKRFQLQIEADRER-HQYEVSKLNQRIDQLTRENQ 109
Query: 696 RLNEQVQELQRQ 731
RLNEQV ++ +
Sbjct: 110 RLNEQVFNIRSE 121
>SB_11987| Best HMM Match : OTU (HMM E-Value=1.1e-24)
Length = 1142
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/78 (26%), Positives = 35/78 (44%)
Frame = +3
Query: 483 QERVPAVQQYKNIIKVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSDQVT 662
+ + QQ K ++VI+ E DI M N+ K KNE +++DQ+
Sbjct: 620 ENHISDYQQLSEKPKNELNKNVIAKEGMSEKTDILMSNEPK--------KNELSNNDQIK 671
Query: 663 SENRQLIEENTRLNEQVQ 716
+ + E+ TR + Q Q
Sbjct: 672 FKRTKAFEDTTRKDSQRQ 689
>SB_5515| Best HMM Match : PspA_IM30 (HMM E-Value=0.14)
Length = 388
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/76 (22%), Positives = 37/76 (48%)
Frame = +3
Query: 501 VQQYKNIIKVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSDQVTSENRQL 680
++ YK + L+ N++N + N+ QA++ L ELK + N + + E ++
Sbjct: 120 LKHYKQQTETLESLFAAVNHNNENLINENLLLQAELDNLNNELKAKDNRIESLQDELERM 179
Query: 681 IEENTRLNEQVQELQR 728
E T L +++ ++
Sbjct: 180 ENEKTELRVELRGAEK 195
>SB_32934| Best HMM Match : K_tetra (HMM E-Value=7.79963e-42)
Length = 1207
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +3
Query: 240 FKFECSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVID 356
F C C Y + N CP + T C FC++C+ D
Sbjct: 823 FVKRCPAC--RYPVEKNGGCPHMSCTMCGGHFCWECLKD 859
>SB_40923| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.29)
Length = 690
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +3
Query: 591 ENQAKIVALEAELKNEKNHSDQVTSENRQLIEENTRLNEQ 710
E QAK ++ +LKNE+N ++ + + L E+N++ E+
Sbjct: 439 EKQAKYTSMLKDLKNERNKIIELEEKLKALEEQNSQRQEE 478
>SB_33966| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 359
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/76 (22%), Positives = 38/76 (50%)
Frame = +3
Query: 501 VQQYKNIIKVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSDQVTSENRQL 680
++ YK + L+ N++N + N+ +A++ L+ ELK + N + + E ++
Sbjct: 91 LKHYKQQTETLESLLATVNHNNENLMNENLLLKAELNKLKYELKVKDNKIESLQDELERM 150
Query: 681 IEENTRLNEQVQELQR 728
E T L +++ +R
Sbjct: 151 ENEKTELRVELRGAER 166
>SB_13020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 722
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +3
Query: 468 FYKKTQERVPAVQQYKNIIKVLQERSVISVENSD-NNCDINMENQAKIVALEAELKNE-K 641
F+ K QE+V A +QY N + L +S +S +C N++ K++ + K + +
Sbjct: 220 FFSKNQEKVIAYKQYSNTLSHLLIKSKKEYFHSQFISCKNNLKATWKLIGKLIQRKTKGQ 279
Query: 642 NHSDQVTSENR 674
+ ++TS NR
Sbjct: 280 SAPSRITSGNR 290
>SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15)
Length = 1774
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/81 (20%), Positives = 41/81 (50%)
Frame = +3
Query: 483 QERVPAVQQYKNIIKVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSDQVT 662
+ +V A++Q +++K +E S ++ + + +A++ ELK ++ S+++
Sbjct: 1374 EAQVKALKQQNDLLKAEKETLFESFKSGQDELSAG-DLKARLGMCTKELKKVQDSSNEIH 1432
Query: 663 SENRQLIEENTRLNEQVQELQ 725
EN+ L EE ++ L+
Sbjct: 1433 KENQDLREELKMAKRHIESLK 1453
>SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016)
Length = 1284
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 603 KIVALEAELKNEKNHSDQVTSENRQLIEE 689
++ LE +LK E+N DQ+ E RQ I E
Sbjct: 1191 EVAKLECDLKREQNEHDQLGEEARQKIAE 1219
>SB_5620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 937
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/53 (24%), Positives = 25/53 (47%)
Frame = +3
Query: 318 TCDHGFCFKCVIDLQSNAMNIPHSIVCCPLCNTQVKMWRSLKPNAVVTCKFYK 476
+C H C KC+ D+ + + ++ CPLC +++ + R N + K
Sbjct: 35 SCMHDLCRKCLEDMAARESS---RVIRCPLCRSEIDIPRGGVKNLPTNLRLMK 84
>SB_4328| Best HMM Match : Vicilin_N (HMM E-Value=0.39)
Length = 738
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/86 (19%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Frame = +3
Query: 483 QERVPAVQQYKNIIKVLQERSVISVE-NSDNNCDINME-NQAKIVALEAELKNE-KNHSD 653
Q ++ +V+++ + K+LQE+ ++ E N ++E ++ + + +++++ + ++
Sbjct: 455 QAKILSVRRHDSSTKLLQEKQRLNSERNRIQRALGHVELDKGHLSTEQQQIRDDIRQRTE 514
Query: 654 QVTSENRQLIEENTRLNEQVQELQRQ 731
T+ +L+++ + EQ+ EL+RQ
Sbjct: 515 GFTARRDELVQQRDDVKEQIAELERQ 540
>SB_7987| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 466
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/57 (28%), Positives = 23/57 (40%)
Frame = +3
Query: 252 CSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVIDLQSNAMNIPHSIVCCPLCNTQV 422
C++C E +Q I T CDH FC C+ + N CP+C +
Sbjct: 160 CAICKEVLTQP--------IATPCDHYFCVLCICEWLDQTYNKSG----CPVCKASI 204
>SB_57688| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 262
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/57 (28%), Positives = 23/57 (40%)
Frame = +3
Query: 252 CSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVIDLQSNAMNIPHSIVCCPLCNTQV 422
C++C E +Q I T CDH FC C+ + N CP+C +
Sbjct: 34 CAICKEVLTQP--------IATPCDHYFCVLCICEWLDQTYNKSG----CPVCKASI 78
>SB_57045| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = +3
Query: 249 ECSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVIDLQSNAMNIPHSIVCCPLCNTQVKM 428
EC +C E + P ++P C H FC++C++ L S CP C V++
Sbjct: 15 ECPICLERFKD------PRVLP--CLHTFCYECLVGLASRYKT--EGKWPCPQCKMVVQV 64
>SB_33579| Best HMM Match : Laminin_G_2 (HMM E-Value=3.2e-34)
Length = 1071
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +3
Query: 243 KFECSVCFETYSQQSNDTCPFLIPTTCD-HGFCFK--CVIDLQSNAMNIPHSIVC 398
K+ C C++T+ S P L+ TC+ + K C ID+ P ++C
Sbjct: 397 KYTCD-CYKTFYTGSTCEMPLLLKATCEGYNLSNKSSCFIDVDGKGAQAPFHVLC 450
>SB_30093| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 301
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/57 (28%), Positives = 23/57 (40%)
Frame = +3
Query: 252 CSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVIDLQSNAMNIPHSIVCCPLCNTQV 422
C++C E +Q I T CDH FC C+ + N CP+C +
Sbjct: 160 CAICKEVLTQP--------IATPCDHYFCVLCICEWLDQTYNKSG----CPVCKASI 204
>SB_14063| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 301
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/57 (28%), Positives = 23/57 (40%)
Frame = +3
Query: 252 CSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVIDLQSNAMNIPHSIVCCPLCNTQV 422
C++C E +Q I T CDH FC C+ + N CP+C +
Sbjct: 160 CAICKEVLTQP--------IATPCDHYFCVLCICEWLDQTYNKSG----CPVCKASI 204
>SB_9017| Best HMM Match : zf-C3HC4 (HMM E-Value=7.9e-12)
Length = 203
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = +3
Query: 249 ECSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVIDLQSNAMNIPHSIVCCPLCNTQVKM 428
EC +C E + P ++P C H FC++C++ L S CP C V++
Sbjct: 15 ECPICLERFKD------PRVLP--CLHTFCYECLVGLASRYKT--EGKWPCPQCKMVVQV 64
>SB_56660| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 917
Score = 28.7 bits (61), Expect = 5.1
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -1
Query: 624 QLPKQLFLPDSPYLCHNCCRCF 559
++ K+L LP+ P+ C C +CF
Sbjct: 326 EVSKELNLPEKPHKCDECGKCF 347
>SB_32454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1161
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +3
Query: 549 ISVENSDNNCDINMENQAKIVALEAELKNEKN---HSDQVTSENRQLIEENTRLNEQVQE 719
+ + N+D E QA++ + +E EK SDQ + + + IE L+E++QE
Sbjct: 625 VEIRNADRK---RRELQAQVEEMSSEANREKKLRVRSDQYSKQLEEEIEYLKELSEKIQE 681
Query: 720 LQ 725
++
Sbjct: 682 IE 683
>SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2672
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +3
Query: 537 ERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSDQVTSEN--RQLIEENTRLNEQ 710
E + +EN+ + + +E + I+ EA K HS + R++ E+ RL E
Sbjct: 823 EEKINELENAKKDIERGIEEEKNILMSEARRKEHALHSSLEYEQQRCREMGEQVDRLRED 882
Query: 711 VQELQ 725
+ +LQ
Sbjct: 883 LNKLQ 887
>SB_9664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 54
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +3
Query: 597 QAKIVALEAELKNEKNHS--DQVTSENRQLIEENTRLNEQVQELQR 728
Q ++ E EL +E++ S ++V + LI+EN L QV ELQ+
Sbjct: 5 QLRLQLKEKELNSERDRSLRNKVQDDCTALIKENAALAAQVVELQK 50
>SB_9194| Best HMM Match : SWIM (HMM E-Value=0.01)
Length = 701
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/72 (22%), Positives = 34/72 (47%)
Frame = +3
Query: 495 PAVQQYKNIIKVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSDQVTSENR 674
PAV++ +++K E + + + NN +++ +A +KN N + N
Sbjct: 567 PAVEKLPSLLKNKWEENTVDYADEHNNAYPTFHEFTQMIQKQARIKNHPNVIASPKTAN- 625
Query: 675 QLIEENTRLNEQ 710
Q +++NT E+
Sbjct: 626 QNVDKNTAEGER 637
>SB_43276| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 426
Score = 28.3 bits (60), Expect = 6.8
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = -1
Query: 648 CDFFRSLIQLPKQLFLPDSPYLCHNCCRCFRH 553
C + ++ ++ PY CH C +CF H
Sbjct: 127 CFTYSGALKTHLRIHTGQKPYECHECGKCFTH 158
Score = 27.9 bits (59), Expect = 9.0
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -1
Query: 591 PYLCHNCCRCFRH 553
PY CH C +CF H
Sbjct: 202 PYKCHECGKCFTH 214
>SB_3588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 28.3 bits (60), Expect = 6.8
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = -1
Query: 648 CDFFRSLIQLPKQLFLPDSPYLCHNCCRCFRH 553
C + ++ ++ PY CH C +CF H
Sbjct: 92 CFTYSGALKTHLRIHTGQKPYECHECGKCFTH 123
Score = 27.9 bits (59), Expect = 9.0
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -1
Query: 591 PYLCHNCCRCFRH 553
PY CH C +CF H
Sbjct: 167 PYKCHECGKCFTH 179
>SB_51757| Best HMM Match : Hormone_recep (HMM E-Value=6.4e-37)
Length = 405
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 3 QFVAESLPISKMPRDTNNRRRHRSTPYERPTLEDLH 110
Q ES PI++ P DT RH S+P + +++ H
Sbjct: 148 QVAGESRPITRHP-DTTTDTRHHSSPQTQQLMDNQH 182
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = +3
Query: 615 LEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQELQRQ 731
L+ L K+H + EN +L++EN L ++++L+++
Sbjct: 1526 LKVSLHKTKSHLAEEEMENEKLVKENEILKVELEQLKKE 1564
Score = 27.9 bits (59), Expect = 9.0
Identities = 20/84 (23%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Frame = +3
Query: 474 KKTQER--VPAVQQYKNIIKVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNH 647
+KTQ + ++ K+ ++ E S++ + ++ D+ +Q+K++ A+LKN+KN
Sbjct: 551 EKTQREALLDKLRATKDYLEEQNESLKASLDAARDSNDLLKADQSKLLKEIADLKNDKN- 609
Query: 648 SDQVTSENRQLIEENTRLNEQVQE 719
Q+ N++L + R E ++
Sbjct: 610 --QLKQANQKLGHDRERAVEDAKD 631
>SB_36573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +3
Query: 606 IVALEAELKNEKNHSDQVTSENRQLIEENTRLNE 707
+ +LE ++ ++ DQVT+ + ++ EE +LNE
Sbjct: 11 VASLEKQIAVQEKRLDQVTARSERINEEMQKLNE 44
>SB_3354| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 632
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Frame = +3
Query: 315 TTCDHGFCFKCVIDLQSNAMNIPH-SIVCCPLCNTQVK-----MWRSLKPN 449
T C H FC +C+ ++ A + P+ + + CP C +++ ++ +L PN
Sbjct: 29 TPCLHSFCAECLNEI---ARSRPYQAYIACPTCKYEIRKPEGGLFNTLPPN 76
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,607,932
Number of Sequences: 59808
Number of extensions: 456867
Number of successful extensions: 1908
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 1634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1898
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1962001171
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -