Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8f14
         (732 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           25   1.8  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    25   2.4  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         24   4.2  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         24   4.2  
DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    24   5.6  
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    24   5.6  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    24   5.6  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   9.7  

>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 7/69 (10%)
 Frame = +3

Query: 195  QQRMMAELKKEPVINFKFECSVCFETYSQQSNDTCPFLIPT-------TCDHGFCFKCVI 353
            +    AEL+K  V+         FE +   +N   P+L+         TCD GF  K   
Sbjct: 915  EDHTFAELRKLEVLRLDGNRITSFEVWQLSAN---PYLVEIALANNLWTCDCGFVNKLRS 971

Query: 354  DLQSNAMNI 380
             LQSNA  I
Sbjct: 972  YLQSNADKI 980


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 18/86 (20%), Positives = 39/86 (45%)
 Frame = +3

Query: 474 KKTQERVPAVQQYKNIIKVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSD 653
           ++ QE    + Q +  +K LQ+  + + +       +  E + +    E  L+ E  HS 
Sbjct: 737 ERLQEMTRKLHQRQQHMKKLQQELLTNEQQLQQLAGVVFEGETE----ETTLREELEHSR 792

Query: 654 QVTSENRQLIEENTRLNEQVQELQRQ 731
            + ++ ++ IEE     +QV+   +Q
Sbjct: 793 TILAKLQKGIEEEQAKLDQVRRTVQQ 818


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 627 LKNEKNHSDQVTSENRQLIEENTRLNE 707
           LKNE N +  +T + RQ +     LNE
Sbjct: 513 LKNEFNENRYLTEKRRQTLSAELGLNE 539


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 627 LKNEKNHSDQVTSENRQLIEENTRLNE 707
           LKNE N +  +T + RQ +     LNE
Sbjct: 513 LKNEFNENRYLTEKRRQTLSAELGLNE 539


>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +3

Query: 246 FECSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVI 353
           F+C VC E++           I T C H FC +C +
Sbjct: 245 FKCYVCRESFVDP--------IVTKCKHYFCERCAL 272


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +3

Query: 246 FECSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVI 353
           F+C VC E++           I T C H FC +C +
Sbjct: 245 FKCYVCRESFVDP--------IVTKCKHYFCERCAL 272


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +3

Query: 603 KIVALEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQEL 722
           K  +   EL+  K    Q+  +N ++ E+N RL EQ+  +
Sbjct: 85  KAASTTPELELLKATIQQLEEQNLEMKEQNFRLAEQITRM 124


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 243 KFECSVCFETYSQQSN 290
           +FEC +C  TY++  N
Sbjct: 523 RFECPLCRATYTRSDN 538


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 756,256
Number of Sequences: 2352
Number of extensions: 16025
Number of successful extensions: 38
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)