Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8e23
(612 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q17P00 Cluster: Werner helicase interacting protein; n=... 189 5e-47
UniRef50_UPI00015B415D Cluster: PREDICTED: similar to werner hel... 162 5e-39
UniRef50_UPI0000E4A039 Cluster: PREDICTED: hypothetical protein;... 161 9e-39
UniRef50_UPI00015B6046 Cluster: PREDICTED: similar to werner hel... 157 1e-37
UniRef50_Q96S55 Cluster: ATPase WRNIP1; n=31; Eumetazoa|Rep: ATP... 151 1e-35
UniRef50_UPI0000DB7733 Cluster: PREDICTED: similar to Werner hel... 144 1e-33
UniRef50_Q8R5R3 Cluster: Uncharacterized ATPase related to the h... 141 1e-32
UniRef50_Q3CFZ5 Cluster: AAA ATPase, central region; n=3; Bacter... 140 3e-32
UniRef50_UPI0000D57862 Cluster: PREDICTED: similar to ATPase WRN... 139 5e-32
UniRef50_Q75JU2 Cluster: Similar to Thermoanaerobacter tengconge... 133 3e-30
UniRef50_UPI0000499B2D Cluster: AAA family ATPase; n=1; Entamoeb... 132 5e-30
UniRef50_A0NHS0 Cluster: ATPase, AAA family; n=3; Bacteria|Rep: ... 131 1e-29
UniRef50_P45262 Cluster: Uncharacterized protein HI1590; n=125; ... 131 1e-29
UniRef50_O48696 Cluster: F3I6.23 protein; n=3; Arabidopsis thali... 130 2e-29
UniRef50_P0AAZ6 Cluster: Uncharacterized protein ycaJ; n=63; Gam... 130 3e-29
UniRef50_Q0EY57 Cluster: ATPase; n=1; Mariprofundus ferrooxydans... 127 2e-28
UniRef50_Q88WS5 Cluster: Chromosome segregation helicase; n=31; ... 127 2e-28
UniRef50_UPI0000499E26 Cluster: AAA family ATPase; n=1; Entamoeb... 126 4e-28
UniRef50_Q74BH4 Cluster: ATPase, AAA family; n=2; Deltaproteobac... 125 7e-28
UniRef50_A4GHM5 Cluster: ATPase AAA family protein; n=2; Bacteri... 125 7e-28
UniRef50_P39918 Cluster: Uncharacterized protein CBU_1189; n=67;... 122 9e-27
UniRef50_A1IEP1 Cluster: ATPase, AAA family; n=2; Bacteria|Rep: ... 121 1e-26
UniRef50_P40151 Cluster: DNA-dependent ATPase MGS1; n=6; Sacchar... 120 3e-26
UniRef50_A5UZV8 Cluster: AAA ATPase, central domain protein; n=1... 120 4e-26
UniRef50_Q6CD04 Cluster: Similar to ca|CA5054|IPF3704 Candida al... 119 5e-26
UniRef50_Q4SLJ4 Cluster: Chromosome 15 SCAF14556, whole genome s... 119 6e-26
UniRef50_Q8RGJ6 Cluster: ATPase associated with chromosome archi... 118 1e-25
UniRef50_Q1QXX6 Cluster: AAA ATPase, central region; n=1; Chromo... 117 3e-25
UniRef50_Q28US4 Cluster: AAA ATPase protein; n=11; Proteobacteri... 116 4e-25
UniRef50_Q6MPI4 Cluster: ATPase, AAA family; n=1; Bdellovibrio b... 116 6e-25
UniRef50_A1WB62 Cluster: AAA ATPase, central domain protein; n=2... 115 8e-25
UniRef50_A3LXJ6 Cluster: DNA-dependent ATPase MGS1 (Maintenance ... 115 1e-24
UniRef50_O13984 Cluster: DNA replication ATPase; n=2; Schizosacc... 114 2e-24
UniRef50_A1CI50 Cluster: AAA family ATPase, putative; n=15; Pezi... 113 3e-24
UniRef50_A3IFI7 Cluster: Putative uncharacterized protein; n=1; ... 113 4e-24
UniRef50_A4E6Q7 Cluster: Putative uncharacterized protein; n=2; ... 110 2e-23
UniRef50_A0LGK0 Cluster: AAA ATPase, central domain protein; n=1... 110 2e-23
UniRef50_Q3AA20 Cluster: ATPase, AAA family; n=4; Clostridiales|... 110 3e-23
UniRef50_Q7NIS3 Cluster: Glr2109 protein; n=13; Bacteria|Rep: Gl... 109 4e-23
UniRef50_Q26BL4 Cluster: ATPase related to the helicase subunit ... 108 9e-23
UniRef50_A5DW03 Cluster: Putative uncharacterized protein; n=1; ... 108 9e-23
UniRef50_A6PRD7 Cluster: AAA ATPase, central domain protein; n=4... 108 1e-22
UniRef50_Q9WYX8 Cluster: UPF0189 protein TM_0508; n=4; Thermotog... 108 1e-22
UniRef50_Q4P896 Cluster: Putative uncharacterized protein; n=1; ... 107 3e-22
UniRef50_Q5FQE1 Cluster: ATPase associated with chromosome archi... 106 4e-22
UniRef50_Q3A5K5 Cluster: ATPase, AAA family; n=5; Desulfuromonad... 106 5e-22
UniRef50_A1A0Y3 Cluster: Putative uncharacterized protein; n=2; ... 104 2e-21
UniRef50_A0Q7R7 Cluster: AAA family-ATPase; n=11; Francisella tu... 103 3e-21
UniRef50_A5GNS9 Cluster: ATPase related to the helicase subunit ... 101 1e-20
UniRef50_Q59Y48 Cluster: Putative uncharacterized protein; n=1; ... 100 2e-20
UniRef50_A5D3E6 Cluster: ATPase; n=3; Peptococcaceae|Rep: ATPase... 100 3e-20
UniRef50_Q2J818 Cluster: AAA ATPase, central region; n=5; Actino... 99 4e-20
UniRef50_Q67LR0 Cluster: ATP/GTP-binding domain protein; n=21; B... 100 5e-20
UniRef50_A5WC21 Cluster: AAA ATPase, central domain protein; n=3... 100 5e-20
UniRef50_Q0SS35 Cluster: ATPase, AAA family; n=3; Clostridium|Re... 99 7e-20
UniRef50_A0Q156 Cluster: ATPase, AAA family; n=1; Clostridium no... 98 2e-19
UniRef50_A6DHI5 Cluster: ATPase, AAA family protein; n=1; Lentis... 97 2e-19
UniRef50_Q8CXU0 Cluster: Uncharacterized ATPase related to the h... 97 3e-19
UniRef50_Q1D8G6 Cluster: ATPase, AAA family; n=1; Myxococcus xan... 95 9e-19
UniRef50_Q50739 Cluster: Uncharacterized AAA domain-containing p... 94 3e-18
UniRef50_Q5KCD2 Cluster: Helicase, putative; n=2; Filobasidiella... 93 5e-18
UniRef50_A6LJD0 Cluster: AAA ATPase, central domain protein; n=2... 90 3e-17
UniRef50_A5DZ06 Cluster: Putative uncharacterized protein; n=1; ... 90 3e-17
UniRef50_Q6BUL9 Cluster: Similarities with CA0979|IPF19713 Candi... 87 2e-16
UniRef50_A4M640 Cluster: AAA ATPase, central domain protein; n=1... 85 1e-15
UniRef50_A5DKE6 Cluster: Putative uncharacterized protein; n=1; ... 84 2e-15
UniRef50_Q5FKX4 Cluster: Chromosomal segregation helicase; n=113... 82 9e-15
UniRef50_UPI00004999D6 Cluster: AAA family ATPase; n=1; Entamoeb... 81 3e-14
UniRef50_Q896F9 Cluster: ATPase associated with chromosome archi... 81 3e-14
UniRef50_Q2U8Q6 Cluster: ATPase related to the helicase subunit ... 80 4e-14
UniRef50_A4EPD3 Cluster: ATPase; n=2; Rhodobacteraceae|Rep: ATPa... 77 3e-13
UniRef50_A3LTW2 Cluster: Replication factor ATPase; n=1; Pichia ... 77 3e-13
UniRef50_A6QCT9 Cluster: ATPase, AAA family; n=22; Epsilonproteo... 76 8e-13
UniRef50_Q5FK52 Cluster: Chromosome segregation helicase; n=3; L... 75 1e-12
UniRef50_A5V6U8 Cluster: AAA ATPase, central domain protein; n=1... 75 2e-12
UniRef50_Q6QN33 Cluster: AAA type ATPase; n=6; Mollicutes|Rep: A... 74 2e-12
UniRef50_Q8EWR1 Cluster: Predicted ATPase; n=1; Mycoplasma penet... 72 9e-12
UniRef50_A1VDA3 Cluster: AAA ATPase, central domain protein; n=4... 72 9e-12
UniRef50_Q043K3 Cluster: Helicase subunit of the Holliday juncti... 71 2e-11
UniRef50_Q9PQU7 Cluster: Conserved hypothetical ATP/GTP-binding ... 69 9e-11
UniRef50_A0RRQ8 Cluster: ATPase, AAA family; n=3; Campylobacter|... 67 3e-10
UniRef50_Q7QUE5 Cluster: GLP_59_18656_20185; n=1; Giardia lambli... 66 6e-10
UniRef50_Q7NAV9 Cluster: Predicted ATP/GTPase; n=1; Mycoplasma g... 60 3e-08
UniRef50_A5IXK5 Cluster: ATPase, AAA family; n=1; Mycoplasma aga... 59 7e-08
UniRef50_Q6KHC7 Cluster: ATPase; n=1; Mycoplasma mobile|Rep: ATP... 59 9e-08
UniRef50_A3ERK9 Cluster: ATPase related to the helicase subunit ... 54 3e-06
UniRef50_A5K4E2 Cluster: Putative uncharacterized protein; n=1; ... 54 4e-06
UniRef50_Q8IIN7 Cluster: Putative uncharacterized protein; n=1; ... 50 3e-05
UniRef50_Q7RDE2 Cluster: Putative helicase RUVBL; n=5; Plasmodiu... 46 0.001
UniRef50_Q67J53 Cluster: Lon-like ATP-dependent protease; n=14; ... 42 0.002
UniRef50_A6MVQ4 Cluster: DNA polymerase III; n=1; Rhodomonas sal... 43 0.007
UniRef50_Q97FT8 Cluster: Lon-like ATP-dependent protease; n=1; C... 40 0.013
UniRef50_Q5PAJ8 Cluster: ATP-dependent clp protease ATP-binding ... 42 0.015
UniRef50_Q97CY0 Cluster: Lon-like ATP-dependent protease; n=8; C... 41 0.027
UniRef50_Q46HP5 Cluster: DNA polymerase III, delta prime subunit... 40 0.035
UniRef50_Q7NAN5 Cluster: DnaX; n=1; Mycoplasma gallisepticum|Rep... 40 0.047
UniRef50_Q1WR72 Cluster: ATP-dependent Clp protease; n=1; Lactob... 40 0.047
UniRef50_Q1FKE1 Cluster: DNA polymerase III, subunits gamma and ... 40 0.047
UniRef50_Q18C99 Cluster: DNA polymerase III subunit gamma/tau; n... 39 0.081
UniRef50_Q8EUW0 Cluster: DNA polymerase III gamma-tau subunits; ... 39 0.11
UniRef50_Q7RJ00 Cluster: Putative uncharacterized protein PY0346... 39 0.11
UniRef50_A0RNV1 Cluster: ATP-dependent Clp protease ATP-binding ... 38 0.14
UniRef50_P47658 Cluster: DNA polymerase III subunit gamma/tau; n... 38 0.14
UniRef50_Q8A7B5 Cluster: DNA polymerase III subunit gamma/tau; n... 38 0.19
UniRef50_Q73KU3 Cluster: ATP-dependent Clp protease, ATP-binding... 38 0.19
UniRef50_Q4FNB0 Cluster: DNA-directed DNA polymerase gamma/tau s... 38 0.19
UniRef50_Q0B0W5 Cluster: DNA-directed DNA polymerase; n=1; Syntr... 38 0.19
UniRef50_A7M2L2 Cluster: Putative uncharacterized protein; n=2; ... 38 0.19
UniRef50_A7I2C9 Cluster: ATP-dependent CLP protease ATP-binding ... 38 0.19
UniRef50_A5P451 Cluster: DNA-directed DNA polymerase; n=1; Methy... 38 0.19
UniRef50_Q8D230 Cluster: DnaX protein; n=1; Wigglesworthia gloss... 37 0.33
UniRef50_Q899U1 Cluster: DNA polymerase III subunits gamma and t... 37 0.33
UniRef50_Q5F3M1 Cluster: Putative uncharacterized protein; n=7; ... 37 0.43
UniRef50_Q601S8 Cluster: DNA polymerase III gamma-tau subunits; ... 37 0.43
UniRef50_A2A0B1 Cluster: DNA polymerase III subunit gamma/tau; n... 37 0.43
UniRef50_Q3LW37 Cluster: ATP binding subunit of Clp protease; n=... 37 0.43
UniRef50_Q7R7M3 Cluster: Elongation factor Tu family, putative; ... 37 0.43
UniRef50_A4CK17 Cluster: DNA polymerase III subunit gamma/tau; n... 36 0.57
UniRef50_A5CF91 Cluster: DNA polymerase III gamma and tau chains... 36 0.76
UniRef50_Q7NRW0 Cluster: ATP-dependent Clp protease, ATP-binding... 36 1.0
UniRef50_Q30SV7 Cluster: Diguanylate cyclase (GGDEF domain) with... 36 1.0
UniRef50_O67707 Cluster: DNA polymerase III gamma subunit; n=3; ... 36 1.0
UniRef50_A6DEF7 Cluster: ENDOPEPTIDASE CLP ATP-BINDING CHAIN A; ... 36 1.0
UniRef50_Q661F8 Cluster: DNA polymerase III, subunits gamma and ... 35 1.3
UniRef50_Q5FTB4 Cluster: DNA polymerase III subunit gamma/tau; n... 35 1.3
UniRef50_O25419 Cluster: DNA polymerase III gamma and tau subuni... 35 1.3
UniRef50_Q1GV06 Cluster: DNA polymerase III, subunits gamma and ... 35 1.3
UniRef50_Q1GKB7 Cluster: DNA polymerase III subunits gamma and t... 35 1.3
UniRef50_Q057E1 Cluster: DNA polymerase III, g and t subunits; n... 35 1.3
UniRef50_Q23EV8 Cluster: Putative uncharacterized protein; n=1; ... 35 1.3
UniRef50_Q92DN5 Cluster: Lin0778 protein; n=15; Firmicutes|Rep: ... 35 1.8
UniRef50_Q8ZSD6 Cluster: DNA polymerase III, delta prime subunit... 35 1.8
UniRef50_Q7MUS1 Cluster: DNA polymerase III, gamma and tau subun... 35 1.8
UniRef50_Q2GE93 Cluster: ATP-dependent Clp protease, ATP-binding... 35 1.8
UniRef50_A6EHG2 Cluster: DNA polymerase III, tau and gamma subun... 35 1.8
UniRef50_A5V2B2 Cluster: DNA polymerase III, subunits gamma and ... 35 1.8
UniRef50_Q8IM28 Cluster: ATP-dependent Clp protease, putative; n... 35 1.8
UniRef50_Q23RX6 Cluster: Myb-like DNA-binding domain containing ... 35 1.8
UniRef50_Q8KUM7 Cluster: S-layer protein; n=1; Clostridium diffi... 34 2.3
UniRef50_Q4VK18 Cluster: CysG; n=15; Proteobacteria|Rep: CysG - ... 34 2.3
UniRef50_Q03HM3 Cluster: Transcriptional regulator containing an... 34 2.3
UniRef50_A6M341 Cluster: Sigma-54 factor, interaction domain-con... 34 2.3
UniRef50_A4XJ39 Cluster: DNA polymerase III, subunits gamma and ... 34 2.3
UniRef50_A4XIS4 Cluster: Transcription-repair coupling factor; n... 34 2.3
UniRef50_Q8IHX0 Cluster: Putative uncharacterized protein; n=1; ... 34 2.3
UniRef50_O77314 Cluster: Putative uncharacterized protein MAL3P1... 34 2.3
UniRef50_Q5AMW9 Cluster: Putative uncharacterized protein; n=2; ... 34 2.3
UniRef50_O83779 Cluster: ATP-dependent Clp protease subunit A; n... 34 3.1
UniRef50_Q1EXM9 Cluster: Putative uncharacterized protein; n=1; ... 34 3.1
UniRef50_A6M2G4 Cluster: Sigma-54 factor, interaction domain-con... 34 3.1
UniRef50_Q384I2 Cluster: Putative uncharacterized protein; n=1; ... 34 3.1
UniRef50_P75177 Cluster: DNA polymerase III subunit gamma/tau; n... 34 3.1
UniRef50_Q6MRF3 Cluster: Aspartokinase III, lysine sensitive; n=... 33 4.0
UniRef50_Q18XU0 Cluster: Putative uncharacterized protein; n=3; ... 33 4.0
UniRef50_A5CE79 Cluster: Putative uncharacterized protein; n=1; ... 33 4.0
UniRef50_A2SSR6 Cluster: Helicase domain protein; n=3; cellular ... 33 4.0
UniRef50_Q9PCH3 Cluster: DNA polymerase III subunit; n=12; Xanth... 33 5.3
UniRef50_Q98RG0 Cluster: DNA POLYMERASE III SUBUNIT GAMMA AND TA... 33 5.3
UniRef50_Q97M18 Cluster: Possible transcriptional regulator of l... 33 5.3
UniRef50_Q8RDI6 Cluster: DNA polymerase III, gamma/tau subunits;... 33 5.3
UniRef50_Q82Z59 Cluster: ATP-dependent helicase, DEAH-box family... 33 5.3
UniRef50_Q9VC35 Cluster: CG5807-PA; n=9; Endopterygota|Rep: CG58... 33 5.3
UniRef50_Q7RDQ7 Cluster: ClpB protein; n=8; Plasmodium|Rep: ClpB... 33 5.3
UniRef50_Q54PY2 Cluster: Putative uncharacterized protein; n=1; ... 33 5.3
UniRef50_Q9X151 Cluster: ABC transporter, ATP-binding protein; n... 33 7.1
UniRef50_Q6F0D9 Cluster: DNA polymerase III gamma and tau subuni... 33 7.1
UniRef50_Q67PY3 Cluster: NifA family transcriptional regulator; ... 33 7.1
UniRef50_Q3J800 Cluster: DNA-directed DNA polymerase; n=1; Nitro... 33 7.1
UniRef50_Q2STA6 Cluster: DNA polymerase III gamma-tau subunits; ... 33 7.1
UniRef50_Q0P9E6 Cluster: ATP-dependent Clp protease ATP-binding ... 33 7.1
UniRef50_A6LS08 Cluster: Sigma-54 factor, interaction domain-con... 33 7.1
UniRef50_A3JQW8 Cluster: DNA polymerase III subunits gamma and t... 33 7.1
UniRef50_A3CKB2 Cluster: ATPase with chaperone activity, ATP-bin... 33 7.1
UniRef50_A2FWY2 Cluster: Putative uncharacterized protein; n=2; ... 33 7.1
UniRef50_A0DBV4 Cluster: Chromosome undetermined scaffold_45, wh... 33 7.1
UniRef50_Q8F7Y2 Cluster: Holliday junction ATP-dependent DNA hel... 33 7.1
UniRef50_Q82ZR7 Cluster: Sigma-54 dependent DNA-binding response... 32 9.3
UniRef50_Q185K2 Cluster: Putative sigma-54 interacting transcrip... 32 9.3
UniRef50_A7HJU2 Cluster: ATPase AAA-2 domain protein; n=2; Therm... 32 9.3
UniRef50_A6H1N5 Cluster: Putative uncharacterized protein; n=1; ... 32 9.3
UniRef50_A1ZYY6 Cluster: Putative uncharacterized protein; n=1; ... 32 9.3
UniRef50_Q8IE78 Cluster: Putative uncharacterized protein PF13_0... 32 9.3
UniRef50_A2G2Z1 Cluster: Putative uncharacterized protein; n=1; ... 32 9.3
UniRef50_A0EH26 Cluster: Chromosome undetermined scaffold_96, wh... 32 9.3
UniRef50_Q5UR98 Cluster: Uncharacterized protein L574; n=1; Acan... 32 9.3
>UniRef50_Q17P00 Cluster: Werner helicase interacting protein; n=2;
Endopterygota|Rep: Werner helicase interacting protein -
Aedes aegypti (Yellowfever mosquito)
Length = 560
Score = 189 bits (460), Expect = 5e-47
Identities = 94/155 (60%), Positives = 118/155 (76%), Gaps = 1/155 (0%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFN 330
T+LA++I+ CKK ++KFVKLSAT SG+NDVKE VK+AKND FK +TI+FMDEIHRFN
Sbjct: 186 TTLAHIIAAHCKKHGSMKFVKLSATMSGVNDVKEAVKLAKNDLAFKRKTIMFMDEIHRFN 245
Query: 331 KLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAI- 507
KLQQD FLPHVE+GTITLIGATTENPSFSLN+ALLSRCRV+V++KL E VM ILK+A+
Sbjct: 246 KLQQDIFLPHVESGTITLIGATTENPSFSLNSALLSRCRVIVLEKLGVEAVMKILKRALP 305
Query: 508 EYNEAKLINTKETVNKSDEPNQTIPRYLIEEASLQ 612
+Y N + P +PR +I +++
Sbjct: 306 QYKTVMFENNNRVPDIRGLP--FVPRMMISAETIR 338
>UniRef50_UPI00015B415D Cluster: PREDICTED: similar to werner
helicase interacting protein; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to werner helicase
interacting protein - Nasonia vitripennis
Length = 522
Score = 162 bits (394), Expect = 5e-39
Identities = 78/122 (63%), Positives = 99/122 (81%), Gaps = 2/122 (1%)
Frame = +1
Query: 151 TSLANVISNICKK--QNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHR 324
TSLANVI+N C+ ++VKLSA SGI+DVK+ + IA N+ +F +T++FMDEIHR
Sbjct: 159 TSLANVIANTCQHCPGGKYRYVKLSAAMSGISDVKDAITIASNELKFGRRTVMFMDEIHR 218
Query: 325 FNKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKA 504
FNK QQDTFLPH+E+GTI LIGATTENPSFSLN ALLSRCRV+V++KLT E++ IL +A
Sbjct: 219 FNKTQQDTFLPHIESGTIILIGATTENPSFSLNAALLSRCRVIVLEKLTIENLTEILIRA 278
Query: 505 IE 510
I+
Sbjct: 279 IK 280
>UniRef50_UPI0000E4A039 Cluster: PREDICTED: hypothetical protein;
n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 672
Score = 161 bits (392), Expect = 9e-39
Identities = 77/131 (58%), Positives = 105/131 (80%), Gaps = 1/131 (0%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQ-FKNQTILFMDEIHRF 327
TSLANVI+ K +N +F+ SATTS ++DVK V+IA+N+ + ++ +TILF+DEIHRF
Sbjct: 320 TSLANVIARQAKVRNTHRFITFSATTSNVSDVKSAVEIARNEQRMYRRKTILFIDEIHRF 379
Query: 328 NKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAI 507
NK QQDTFL HVENGTI LIGATTENPSF +N+ALLSRCRVVV++KL+ E +M+IL++A+
Sbjct: 380 NKTQQDTFLLHVENGTIILIGATTENPSFRVNSALLSRCRVVVLEKLSPESIMLILERAL 439
Query: 508 EYNEAKLINTK 540
+ + + N +
Sbjct: 440 KEGQVGIENAE 450
>UniRef50_UPI00015B6046 Cluster: PREDICTED: similar to werner
helicase interacting protein; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to werner helicase
interacting protein - Nasonia vitripennis
Length = 462
Score = 157 bits (382), Expect = 1e-37
Identities = 80/139 (57%), Positives = 103/139 (74%), Gaps = 2/139 (1%)
Frame = +1
Query: 151 TSLANVISNICKKQNNL--KFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHR 324
TSL NVI KK +++ KF+KLSATTS INDV++ V A+N A+ +T++FMDEIHR
Sbjct: 117 TSLVNVIMQESKKLSDIPVKFIKLSATTSSINDVRKAVTEAENQAKQGRRTVVFMDEIHR 176
Query: 325 FNKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKA 504
FNKLQQD FLPHVE GT LIGATTENPS LN+ALLSRCRV V+ KL E+++ IL KA
Sbjct: 177 FNKLQQDIFLPHVEAGTFILIGATTENPSSGLNSALLSRCRVFVLKKLQKENLVSILMKA 236
Query: 505 IEYNEAKLINTKETVNKSD 561
I+ + +++ E ++K D
Sbjct: 237 IKMMDGEVVTESEIISKVD 255
>UniRef50_Q96S55 Cluster: ATPase WRNIP1; n=31; Eumetazoa|Rep: ATPase
WRNIP1 - Homo sapiens (Human)
Length = 665
Score = 151 bits (366), Expect = 1e-35
Identities = 74/120 (61%), Positives = 99/120 (82%), Gaps = 1/120 (0%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQF-KNQTILFMDEIHRF 327
T+LA++I++ KK ++++FV LSAT + NDV++++K A+N+ F K +TILF+DEIHRF
Sbjct: 275 TTLAHIIASNSKK-HSIRFVTLSATNAKTNDVRDVIKQAQNEKSFFKRKTILFIDEIHRF 333
Query: 328 NKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAI 507
NK QQDTFLPHVE GTITLIGATTENPSF +N ALLSRCRV+V++KL E ++ IL +AI
Sbjct: 334 NKSQQDTFLPHVECGTITLIGATTENPSFQVNAALLSRCRVIVLEKLPVEAMVTILMRAI 393
>UniRef50_UPI0000DB7733 Cluster: PREDICTED: similar to Werner
helicase interacting protein isoform 1; n=1; Apis
mellifera|Rep: PREDICTED: similar to Werner helicase
interacting protein isoform 1 - Apis mellifera
Length = 433
Score = 144 bits (349), Expect = 1e-33
Identities = 71/130 (54%), Positives = 96/130 (73%), Gaps = 2/130 (1%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLK--FVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHR 324
TSL N+IS I K+ + K + LSAT+SG++++K I+ K +++F NQ I+ MD+IHR
Sbjct: 63 TSLTNIISKISKEMHGEKVNIINLSATSSGVSNIKNIINKTKTESKF-NQIIVIMDKIHR 121
Query: 325 FNKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKA 504
FNKLQQD FLPHVE GT TLIG TTENPS+SLN+ALLSRCR+ ++KLT +++ IL KA
Sbjct: 122 FNKLQQDIFLPHVETGTFTLIGTTTENPSYSLNSALLSRCRIFALNKLTMLNIVEILCKA 181
Query: 505 IEYNEAKLIN 534
I ++ N
Sbjct: 182 ISSINGEIYN 191
>UniRef50_Q8R5R3 Cluster: Uncharacterized ATPase related to the
helicase subunit of the Holliday junction resolvase;
n=2; Bacteria|Rep: Uncharacterized ATPase related to the
helicase subunit of the Holliday junction resolvase -
Thermoanaerobacter tengcongensis
Length = 440
Score = 141 bits (341), Expect = 1e-32
Identities = 69/126 (54%), Positives = 92/126 (73%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFN 330
T+LA +I+N+ N KFV SA SGI ++KEI+ A+ DA + +T++F+DEIHRFN
Sbjct: 66 TTLAMIIANM----TNSKFVNFSAVLSGIKEIKEIMAQAERDAMYGQRTVVFIDEIHRFN 121
Query: 331 KLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIE 510
K QQD FLPHVE G I LIGATTENPSF +N+ALLSR +V +M L +D+M+ILK+A++
Sbjct: 122 KAQQDAFLPHVEKGNIILIGATTENPSFEVNSALLSRSKVFMMKPLDVKDIMIILKRALK 181
Query: 511 YNEAKL 528
E L
Sbjct: 182 DEERGL 187
>UniRef50_Q3CFZ5 Cluster: AAA ATPase, central region; n=3;
Bacteria|Rep: AAA ATPase, central region -
Thermoanaerobacter ethanolicus ATCC 33223
Length = 443
Score = 140 bits (338), Expect = 3e-32
Identities = 67/120 (55%), Positives = 91/120 (75%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFN 330
T+LA +I+N+ N KF+ SA SGI ++KEI+ A+ DA + +T++F+DEIHRFN
Sbjct: 67 TTLAMIIANM----TNSKFITFSAVLSGIKEIKEIMAKAELDAMYGTRTVVFIDEIHRFN 122
Query: 331 KLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIE 510
K QQD FLPHVE G I LIGATTENPSF +N+ALLSR +V VM LT ED++++LK+A++
Sbjct: 123 KAQQDAFLPHVEKGNIILIGATTENPSFEVNSALLSRSKVFVMKPLTEEDLLILLKRALK 182
>UniRef50_UPI0000D57862 Cluster: PREDICTED: similar to ATPase WRNIP1
(Werner helicase-interacting protein 1); n=1; Tribolium
castaneum|Rep: PREDICTED: similar to ATPase WRNIP1
(Werner helicase-interacting protein 1) - Tribolium
castaneum
Length = 494
Score = 139 bits (336), Expect = 5e-32
Identities = 69/118 (58%), Positives = 86/118 (72%), Gaps = 1/118 (0%)
Frame = +1
Query: 151 TSLANVISNICKKQ-NNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRF 327
TSL+ VI ICK LKFV L A T+G+ DV+ IV AK +F +T+LFMDEIHRF
Sbjct: 142 TSLSGVIQGICKSNPTKLKFVSLCAATAGVKDVQNIVSAAKLQQKFGCRTVLFMDEIHRF 201
Query: 328 NKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKK 501
NK QQD FL HVE G I L+GATTENPSF++N+ALLSRCRV+V+ KL + + IL++
Sbjct: 202 NKKQQDIFLLHVEKGDIILVGATTENPSFTVNSALLSRCRVIVLQKLDPDCLYQILER 259
>UniRef50_Q75JU2 Cluster: Similar to Thermoanaerobacter
tengcongensis. Uncharacterized ATPase related to the
helicase subunit of the holliday junction resolvase;
n=2; Dictyostelium discoideum|Rep: Similar to
Thermoanaerobacter tengcongensis. Uncharacterized ATPase
related to the helicase subunit of the holliday junction
resolvase - Dictyostelium discoideum (Slime mold)
Length = 876
Score = 133 bits (322), Expect = 3e-30
Identities = 61/114 (53%), Positives = 83/114 (72%)
Frame = +1
Query: 169 ISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDT 348
++ I ++N LSA SG+ D+KE++ A+N QF +TILF+DEIHR+NKLQQD
Sbjct: 247 LAQIVASKSNYNINALSAVGSGVKDIKEVIDKARNTLQFGKKTILFIDEIHRYNKLQQDV 306
Query: 349 FLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIE 510
LP +E+G I LIGATTENPSF LN ALLSRC+V M+KLT E++ ++K+ +E
Sbjct: 307 LLPAIESGIIILIGATTENPSFELNGALLSRCKVFKMEKLTKENLETLIKRTLE 360
>UniRef50_UPI0000499B2D Cluster: AAA family ATPase; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: AAA family ATPase - Entamoeba
histolytica HM-1:IMSS
Length = 611
Score = 132 bits (320), Expect = 5e-30
Identities = 65/122 (53%), Positives = 88/122 (72%), Gaps = 2/122 (1%)
Frame = +1
Query: 169 ISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDT 348
I+ I K + F+ +SA +S D K+++ AK+ + TILF+DEIH N+LQQDT
Sbjct: 95 IAGIIKNNSKSTFISMSAASSKKEDFKKVINDAKHRKRMGINTILFLDEIHSLNRLQQDT 154
Query: 349 FLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAI--EYNEA 522
FLP +E+GTI LIGATTENPSF LNNAL+SRC++V + KLT EDV+ I++KAI EY +
Sbjct: 155 FLPAIESGTIILIGATTENPSFELNNALMSRCQLVTLKKLTDEDVVKIMRKAIDEEYCNS 214
Query: 523 KL 528
K+
Sbjct: 215 KI 216
>UniRef50_A0NHS0 Cluster: ATPase, AAA family; n=3; Bacteria|Rep:
ATPase, AAA family - Oenococcus oeni ATCC BAA-1163
Length = 467
Score = 131 bits (317), Expect = 1e-29
Identities = 62/120 (51%), Positives = 94/120 (78%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFN 330
T+LA +I++ ++ KF+ SA TSGI ++++I+K A+N+ QF +TI+F+DEIHRFN
Sbjct: 88 TTLAEIIAH----RSKAKFITFSAATSGIKEIRKIMKDAENNRQFGVRTIVFIDEIHRFN 143
Query: 331 KLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIE 510
K QQD+FLP+VE G+I LIGATTENPSF +N+ALLSR +V V+ +L + D++ +L+ A++
Sbjct: 144 KAQQDSFLPYVEKGSIILIGATTENPSFEINSALLSRSKVFVLRQLKSSDIVKLLENALK 203
>UniRef50_P45262 Cluster: Uncharacterized protein HI1590; n=125;
Bacteria|Rep: Uncharacterized protein HI1590 -
Haemophilus influenzae
Length = 446
Score = 131 bits (317), Expect = 1e-29
Identities = 68/158 (43%), Positives = 101/158 (63%)
Frame = +1
Query: 136 FFIPITSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDE 315
F+ P + ++ I ++ N + ++SA TSGI +++E + AK + +TILF+DE
Sbjct: 55 FWGPPGTGKTTLAEIIAQRINAEVERISAVTSGIKEIREAIDRAKQNRLADRKTILFVDE 114
Query: 316 IHRFNKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVIL 495
+HRFNK QQD FLPH+E+GT+ IGATTENPSF LNNALLSR RV V+ LTT ++ +L
Sbjct: 115 VHRFNKSQQDAFLPHIEDGTVIFIGATTENPSFELNNALLSRARVYVLKSLTTAEIEQVL 174
Query: 496 KKAIEYNEAKLINTKETVNKSDEPNQTIPRYLIEEASL 609
++A+E + K KE + + Q + Y+ +A L
Sbjct: 175 QQAVE--DPKRGLGKERLILEENLLQVLAEYVNGDARL 210
>UniRef50_O48696 Cluster: F3I6.23 protein; n=3; Arabidopsis
thaliana|Rep: F3I6.23 protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 525
Score = 130 bits (315), Expect = 2e-29
Identities = 65/132 (49%), Positives = 92/132 (69%), Gaps = 1/132 (0%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKN-DAQFKNQTILFMDEIHRF 327
TS+A + N K + +FV LSA TSG+ DV++ V+ AK + + + +T+LFMDE+HRF
Sbjct: 151 TSIAKSLINSSKDPSLYRFVSLSAVTSGVKDVRDAVESAKRLNLEGRKRTVLFMDEVHRF 210
Query: 328 NKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAI 507
NK QQDTFLP +E+G+I IGATTENPSF L LLSRCRV+ ++ L V +L++A+
Sbjct: 211 NKSQQDTFLPVIEDGSILFIGATTENPSFHLITPLLSRCRVLTLNPLKPNHVETLLRRAV 270
Query: 508 EYNEAKLINTKE 543
+ +E L N+ E
Sbjct: 271 DDSERGLPNSVE 282
>UniRef50_P0AAZ6 Cluster: Uncharacterized protein ycaJ; n=63;
Gammaproteobacteria|Rep: Uncharacterized protein ycaJ -
Escherichia coli O157:H7
Length = 447
Score = 130 bits (314), Expect = 3e-29
Identities = 62/120 (51%), Positives = 87/120 (72%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFN 330
T+LA VI+ N ++SA TSG+ +++E ++ A+ + +TILF+DE+HRFN
Sbjct: 64 TTLAEVIARYA----NADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFN 119
Query: 331 KLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIE 510
K QQD FLPH+E+GTIT IGATTENPSF LN+ALLSR RV ++ L+TED+ +L +A+E
Sbjct: 120 KSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAME 179
>UniRef50_Q0EY57 Cluster: ATPase; n=1; Mariprofundus ferrooxydans
PV-1|Rep: ATPase - Mariprofundus ferrooxydans PV-1
Length = 448
Score = 127 bits (307), Expect = 2e-28
Identities = 65/121 (53%), Positives = 88/121 (72%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFN 330
T+LA V+++ + FV+LSA ++G +V+++VK A++ Q +LF+DEIHRFN
Sbjct: 70 TTLATVMADAA----GIPFVQLSAVSAGKAEVQDVVKRARSAGQ---TWLLFLDEIHRFN 122
Query: 331 KLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIE 510
K QQD LP +E+GT+ L+GATTENPSFSLNNALLSRCRV+V+ L DV VILK+A
Sbjct: 123 KAQQDVLLPCIEDGTLVLVGATTENPSFSLNNALLSRCRVIVLQALQASDVAVILKRACR 182
Query: 511 Y 513
Y
Sbjct: 183 Y 183
>UniRef50_Q88WS5 Cluster: Chromosome segregation helicase; n=31;
Bacteria|Rep: Chromosome segregation helicase -
Lactobacillus plantarum
Length = 458
Score = 127 bits (306), Expect = 2e-28
Identities = 58/114 (50%), Positives = 84/114 (73%)
Frame = +1
Query: 169 ISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDT 348
++ I +Q F+ SA TSGI ++++I+ A+ + F +TI+F+DEIHRFNK QQD
Sbjct: 67 LAEIIAQQTQSHFITFSAVTSGIKEIRQIMDEAEANRDFGEKTIVFIDEIHRFNKAQQDA 126
Query: 349 FLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIE 510
FLP+VE G+ITLIGATTENPSF +N ALLSRC+V+V+ LT + + +L+ A++
Sbjct: 127 FLPYVERGSITLIGATTENPSFEINAALLSRCKVLVLKALTPDALEAVLQGALQ 180
>UniRef50_UPI0000499E26 Cluster: AAA family ATPase; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: AAA family ATPase - Entamoeba
histolytica HM-1:IMSS
Length = 482
Score = 126 bits (304), Expect = 4e-28
Identities = 65/141 (46%), Positives = 91/141 (64%), Gaps = 3/141 (2%)
Frame = +1
Query: 139 FIPITSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKN-DAQFKNQTILFMDE 315
F P S I+ I K + FV++S+ T+ ++K +++ AK + K TILF+DE
Sbjct: 71 FGPPGSGKTTIARIIKNTSKSFFVQISSVTTSKEELKNVIEQAKERKKREKKDTILFVDE 130
Query: 316 IHRFNKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVIL 495
IH NKLQQD FLP +ENG+I L+GATTENPSF LNNAL+SRC +V++ +L E + I+
Sbjct: 131 IHTLNKLQQDIFLPAIENGSIILVGATTENPSFQLNNALMSRCNLVILKRLENESINKII 190
Query: 496 KKAI--EYNEAKLINTKETVN 552
KKAI EY K + + +N
Sbjct: 191 KKAIKEEYQNNKFVIDESGIN 211
>UniRef50_Q74BH4 Cluster: ATPase, AAA family; n=2;
Deltaproteobacteria|Rep: ATPase, AAA family - Geobacter
sulfurreducens
Length = 440
Score = 125 bits (302), Expect = 7e-28
Identities = 64/120 (53%), Positives = 88/120 (73%), Gaps = 1/120 (0%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQ-TILFMDEIHRF 327
T+LA VI+N K F+ SA SGI +++EIVK A+ + +++ + TILF+DEIHRF
Sbjct: 66 TTLARVIANATKSH----FIFFSAILSGIKEIREIVKEAEEEKKYRGRNTILFVDEIHRF 121
Query: 328 NKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAI 507
NK QQD FLP+VE GT T+IGATTENPSF + LLSRC+V+V++ L+ E+V IL+ A+
Sbjct: 122 NKSQQDAFLPYVERGTFTIIGATTENPSFEVVAPLLSRCKVLVLNPLSQENVEQILRSAL 181
>UniRef50_A4GHM5 Cluster: ATPase AAA family protein; n=2;
Bacteria|Rep: ATPase AAA family protein - uncultured
marine bacterium EB0_35D03
Length = 417
Score = 125 bits (302), Expect = 7e-28
Identities = 62/126 (49%), Positives = 87/126 (69%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFN 330
T+LA +I + Q F ++SA GI +++ +++ A+ Q TILF+DEIHRFN
Sbjct: 55 TTLARIICS----QMGAHFEQMSAVLDGIKELRNVIEHAELYKQHDKNTILFVDEIHRFN 110
Query: 331 KLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIE 510
K QQD FLPH+E+G ITLIGATTENPSF +N++LLSR RV +++KL ED+ +I KAI+
Sbjct: 111 KAQQDAFLPHIESGLITLIGATTENPSFEINSSLLSRMRVYILNKLRDEDLKIIASKAIK 170
Query: 511 YNEAKL 528
+ L
Sbjct: 171 SQKITL 176
>UniRef50_P39918 Cluster: Uncharacterized protein CBU_1189; n=67;
cellular organisms|Rep: Uncharacterized protein CBU_1189
- Coxiella burnetii
Length = 440
Score = 122 bits (293), Expect = 9e-27
Identities = 64/129 (49%), Positives = 87/129 (67%), Gaps = 1/129 (0%)
Frame = +1
Query: 145 PITSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQ-TILFMDEIH 321
P S ++ I ++ + +SA +G+ D++++V+ A+ + K Q TILF+DE+H
Sbjct: 52 PPGSGKTTLAEIIAQKAGARVESISAVLAGVKDIRDVVERAE---RHKGQATILFVDEVH 108
Query: 322 RFNKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKK 501
FNK QQD FLPHVE GTITLIGATTENPSF LNNALLSR RV V+ +LT D++ IL+
Sbjct: 109 GFNKSQQDAFLPHVEKGTITLIGATTENPSFQLNNALLSRTRVYVLKQLTEADLLSILEN 168
Query: 502 AIEYNEAKL 528
A+ E L
Sbjct: 169 ALANEERGL 177
>UniRef50_A1IEP1 Cluster: ATPase, AAA family; n=2; Bacteria|Rep:
ATPase, AAA family - Candidatus Desulfococcus oleovorans
Hxd3
Length = 459
Score = 121 bits (292), Expect = 1e-26
Identities = 58/127 (45%), Positives = 89/127 (70%), Gaps = 1/127 (0%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKND-AQFKNQTILFMDEIHRF 327
T+LA +++ + +V++SA SG+ +++E+V+ A+ +F+ TILF+DE+HRF
Sbjct: 67 TTLARILAGM----TGAAYVQISAVLSGVKEIREVVEAARRRRGEFQKDTILFVDEVHRF 122
Query: 328 NKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAI 507
NK QQD FLPHVE+G +TLIGATTENPSF + AL+SRCR++V++ + E V +L +A+
Sbjct: 123 NKSQQDAFLPHVESGLVTLIGATTENPSFEVIPALMSRCRLIVLNPVPEEAVRQVLLRAL 182
Query: 508 EYNEAKL 528
E L
Sbjct: 183 ADTEKGL 189
>UniRef50_P40151 Cluster: DNA-dependent ATPase MGS1; n=6;
Saccharomycetales|Rep: DNA-dependent ATPase MGS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 587
Score = 120 bits (289), Expect = 3e-26
Identities = 57/121 (47%), Positives = 81/121 (66%), Gaps = 1/121 (0%)
Frame = +1
Query: 148 ITSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQF-KNQTILFMDEIHR 324
+T A SN + ++ SAT + +++ I + +K + Q K +T+LF+DEIHR
Sbjct: 190 LTKTATTSSNESNVGSRYFMIETSATKANTQELRGIFEKSKKEYQLTKRRTVLFIDEIHR 249
Query: 325 FNKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKA 504
FNK+QQD LPHVENG I LIGATTENPSF LNNAL+SRC + V++KL ++ ++L +
Sbjct: 250 FNKVQQDLLLPHVENGDIILIGATTENPSFQLNNALISRCLIFVLEKLNVNELCIVLSRG 309
Query: 505 I 507
I
Sbjct: 310 I 310
>UniRef50_A5UZV8 Cluster: AAA ATPase, central domain protein; n=15;
cellular organisms|Rep: AAA ATPase, central domain
protein - Roseiflexus sp. RS-1
Length = 505
Score = 120 bits (288), Expect = 4e-26
Identities = 62/127 (48%), Positives = 89/127 (70%), Gaps = 1/127 (0%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKND-AQFKNQTILFMDEIHRF 327
T+LA +I++ N F +LSA ++G+ D++ +VK A++ F+ +TI+F+DEIHRF
Sbjct: 71 TTLARIIADT----TNAHFEQLSAVSAGVADLRRVVKEAQDRLGMFQQRTIVFIDEIHRF 126
Query: 328 NKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAI 507
NK QQD LP+VE+GTI LIGATTENPSF +N AL SR RV V++ LT + + VI+ +A+
Sbjct: 127 NKAQQDAILPYVEDGTIILIGATTENPSFEVNPALRSRARVFVLEALTDDQIGVIVDRAL 186
Query: 508 EYNEAKL 528
E L
Sbjct: 187 SDTERGL 193
>UniRef50_Q6CD04 Cluster: Similar to ca|CA5054|IPF3704 Candida
albicans unknown function; n=1; Yarrowia lipolytica|Rep:
Similar to ca|CA5054|IPF3704 Candida albicans unknown
function - Yarrowia lipolytica (Candida lipolytica)
Length = 626
Score = 119 bits (287), Expect = 5e-26
Identities = 58/119 (48%), Positives = 86/119 (72%), Gaps = 2/119 (1%)
Frame = +1
Query: 169 ISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQF-KNQTILFMDEIHRFNKLQQD 345
++ I K + +FV+LSAT + + DVK+++ A N+ + K TILF+DE+HRF+K QQD
Sbjct: 172 LARILAKTSGNRFVELSATQNNVADVKKVIDQANNEWKLLKRGTILFIDELHRFSKAQQD 231
Query: 346 TFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKA-IEYNE 519
LP VE G ITLIGATTENPSF L AL SRCRV+ + KL+ +D+ +++++ ++YN+
Sbjct: 232 VLLPAVEKGDITLIGATTENPSFRLVGALTSRCRVLTLKKLSMKDIKEVVERSLVKYND 290
>UniRef50_Q4SLJ4 Cluster: Chromosome 15 SCAF14556, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 15 SCAF14556, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 499
Score = 119 bits (286), Expect = 6e-26
Identities = 53/89 (59%), Positives = 74/89 (83%), Gaps = 1/89 (1%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQF-KNQTILFMDEIHRF 327
T+LA++I+ CK++ +FV LSAT++ ++DV+E++K A+N+ + K +T+LF+DEIHRF
Sbjct: 209 TTLAHIIAGKCKRKGTARFVTLSATSASVSDVREVIKQAQNELRLCKRKTVLFIDEIHRF 268
Query: 328 NKLQQDTFLPHVENGTITLIGATTENPSF 414
NK QQDTFLPHVE GT+ LIGATTENPSF
Sbjct: 269 NKSQQDTFLPHVECGTVILIGATTENPSF 297
>UniRef50_Q8RGJ6 Cluster: ATPase associated with chromosome
architecture/replication; n=3; Fusobacterium
nucleatum|Rep: ATPase associated with chromosome
architecture/replication - Fusobacterium nucleatum
subsp. nucleatum
Length = 407
Score = 118 bits (284), Expect = 1e-25
Identities = 57/122 (46%), Positives = 85/122 (69%), Gaps = 1/122 (0%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQ-TILFMDEIHRF 327
+SL +ISN + F KL+ATT+ ++D++ +V+ A+ + + N+ TILF+DEIHRF
Sbjct: 62 SSLGEIISNTL----DCNFEKLNATTASVSDIRNVVETARRNIELYNKRTILFLDEIHRF 117
Query: 328 NKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAI 507
NK QQD L + E+GT+TLIGATTENP +++NNALLSR V LT ED++ ++ K +
Sbjct: 118 NKNQQDALLSYTEDGTLTLIGATTENPYYNINNALLSRVMVFEFKALTNEDILKLIDKGL 177
Query: 508 EY 513
+
Sbjct: 178 NF 179
>UniRef50_Q1QXX6 Cluster: AAA ATPase, central region; n=1;
Chromohalobacter salexigens DSM 3043|Rep: AAA ATPase,
central region - Chromohalobacter salexigens (strain DSM
3043 / ATCC BAA-138 / NCIMB13768)
Length = 469
Score = 117 bits (281), Expect = 3e-25
Identities = 59/121 (48%), Positives = 84/121 (69%), Gaps = 1/121 (0%)
Frame = +1
Query: 169 ISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQ-TILFMDEIHRFNKLQQD 345
+++I + +LSA +G+ D++ V+ A+ + Q + Q T+LF+DEIHR NK QQD
Sbjct: 89 LADILADASGAMLERLSAVMAGVKDIRAAVERAR-EGQVRGQPTLLFLDEIHRLNKSQQD 147
Query: 346 TFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIEYNEAK 525
LPHVE+G +TLIGATTENPSF +N+ALLSR RV V+ KL TED++ +L +A+ E
Sbjct: 148 ALLPHVESGLLTLIGATTENPSFEVNSALLSRARVYVLRKLETEDLLRVLHQALADTERG 207
Query: 526 L 528
L
Sbjct: 208 L 208
>UniRef50_Q28US4 Cluster: AAA ATPase protein; n=11;
Proteobacteria|Rep: AAA ATPase protein - Jannaschia sp.
(strain CCS1)
Length = 436
Score = 116 bits (279), Expect = 4e-25
Identities = 55/120 (45%), Positives = 86/120 (71%)
Frame = +1
Query: 169 ISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDT 348
I+ + + L FV++SA +G+ D++++ + AK T+LF+DEIHRFNK QQD
Sbjct: 71 IARLLADETALNFVQISAIFTGMPDLRKVFEAAKIRRTNGQGTLLFVDEIHRFNKAQQDG 130
Query: 349 FLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIEYNEAKL 528
FLPH+E+GTI L+GATTENPSF LN A++SR +V+V+++L+ +D+ +L++A + KL
Sbjct: 131 FLPHMEDGTILLVGATTENPSFELNAAVMSRSQVMVLERLSDDDLDALLQRAEAELDRKL 190
>UniRef50_Q6MPI4 Cluster: ATPase, AAA family; n=1; Bdellovibrio
bacteriovorus|Rep: ATPase, AAA family - Bdellovibrio
bacteriovorus
Length = 449
Score = 116 bits (278), Expect = 6e-25
Identities = 54/104 (51%), Positives = 76/104 (73%), Gaps = 1/104 (0%)
Frame = +1
Query: 196 NLKFVKLSATTSGINDVKEIVKIAKNDA-QFKNQTILFMDEIHRFNKLQQDTFLPHVENG 372
N +V L+A SG ++E+ + K+ Q++ +TILF+DEIHRFNK QQD LP VE G
Sbjct: 87 NAHYVHLNAVDSGAKALREVGEAGKDRRLQYQQKTILFVDEIHRFNKAQQDVLLPFVEKG 146
Query: 373 TITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKA 504
+ L+GATTENPS+ LN ALLSRCRVV+ ++L+ +D+ I+K+A
Sbjct: 147 DLVLVGATTENPSYELNRALLSRCRVVIFERLSEDDLNKIVKRA 190
>UniRef50_A1WB62 Cluster: AAA ATPase, central domain protein; n=22;
Proteobacteria|Rep: AAA ATPase, central domain protein -
Acidovorax sp. (strain JS42)
Length = 442
Score = 115 bits (277), Expect = 8e-25
Identities = 52/114 (45%), Positives = 81/114 (71%), Gaps = 2/114 (1%)
Frame = +1
Query: 169 ISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKN--DAQFKNQTILFMDEIHRFNKLQQ 342
I+ + + + +F+ +SA G+ D+++ V++A++ D + +TI+F+DE+HRFNK QQ
Sbjct: 62 IARLMAEAFDAQFISISAVLGGVKDIRDAVQLAESARDGLMQQRTIVFVDEVHRFNKSQQ 121
Query: 343 DTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKA 504
D FLPHVE+G T +GATTENPSF +N+ALLSR V V+ L ++D+ I+ KA
Sbjct: 122 DAFLPHVESGLFTFVGATTENPSFEVNSALLSRAAVYVLQPLGSDDLKQIVAKA 175
>UniRef50_A3LXJ6 Cluster: DNA-dependent ATPase MGS1 (Maintenance of
genome stability protein 1) DNA-directed DNA polymerase
ATPase; n=4; Saccharomycetales|Rep: DNA-dependent ATPase
MGS1 (Maintenance of genome stability protein 1)
DNA-directed DNA polymerase ATPase - Pichia stipitis
(Yeast)
Length = 747
Score = 115 bits (276), Expect = 1e-24
Identities = 64/127 (50%), Positives = 84/127 (66%), Gaps = 1/127 (0%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQ-TILFMDEIHRF 327
TSLA +I++ N KFV+LS S +KE+ A+N+ + TILF+DEIHRF
Sbjct: 228 TSLARIIAHT----TNCKFVELSGAESNAKRLKEVFLQAENEKHLTGRKTILFLDEIHRF 283
Query: 328 NKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAI 507
NK QD LP +E G +T+IGATTENPSF+LNNALLSR VM++LTT ++ IL +A+
Sbjct: 284 NKAVQDLLLPVIEKGVLTVIGATTENPSFTLNNALLSRMHTFVMEQLTTAALIKILARAL 343
Query: 508 EYNEAKL 528
Y KL
Sbjct: 344 -YQVNKL 349
>UniRef50_O13984 Cluster: DNA replication ATPase; n=2;
Schizosaccharomyces pombe|Rep: DNA replication ATPase -
Schizosaccharomyces pombe (Fission yeast)
Length = 504
Score = 114 bits (274), Expect = 2e-24
Identities = 61/137 (44%), Positives = 90/137 (65%), Gaps = 1/137 (0%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQ-TILFMDEIHRF 327
T+LA +I+ K +F+++SAT++ + D ++I + ++N + TI+F+DE+HRF
Sbjct: 134 TTLARLIAVTTKS----RFIEISATSTTVADCRKIFEDSQNYLTLTGRKTIIFLDEVHRF 189
Query: 328 NKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAI 507
N+ QQD FLP VE G +TLIGATTENPSF LN+AL+SRC V V+ KLT ++V IL A
Sbjct: 190 NRAQQDIFLPMVEKGLVTLIGATTENPSFRLNSALISRCPVFVLKKLTRDNVKKILNHAC 249
Query: 508 EYNEAKLINTKETVNKS 558
+L ++ V S
Sbjct: 250 LLESERLGSSMPNVETS 266
>UniRef50_A1CI50 Cluster: AAA family ATPase, putative; n=15;
Pezizomycotina|Rep: AAA family ATPase, putative -
Aspergillus clavatus
Length = 539
Score = 113 bits (272), Expect = 3e-24
Identities = 58/120 (48%), Positives = 84/120 (70%), Gaps = 1/120 (0%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQ-TILFMDEIHRF 327
T++A VI+++ +FV++++T+SG+ + K+I A+++ + TI+F DEIHRF
Sbjct: 169 TTIARVIASMVGS----RFVEINSTSSGVAECKKIFAEARSELNLTGRKTIIFCDEIHRF 224
Query: 328 NKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAI 507
+K QQD FL VE+G +TLIGATTENPSF + NALLSRCR + KLT DV IL +A+
Sbjct: 225 SKSQQDVFLGPVESGQVTLIGATTENPSFKVQNALLSRCRTFTLSKLTDRDVESILHRAL 284
>UniRef50_A3IFI7 Cluster: Putative uncharacterized protein; n=1;
Bacillus sp. B14905|Rep: Putative uncharacterized
protein - Bacillus sp. B14905
Length = 420
Score = 113 bits (271), Expect = 4e-24
Identities = 59/120 (49%), Positives = 84/120 (70%), Gaps = 1/120 (0%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFN 330
TS+AN I+ + L F L+AT +G DV++IV+ +A+ + +LF+DEIHRFN
Sbjct: 45 TSIANAIAG----SSQLPFFALNATRAGKKDVEDIVQ----EARISGKVLLFLDEIHRFN 96
Query: 331 KLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRC-RVVVMDKLTTEDVMVILKKAI 507
KLQQDT LPHVENG+I LIGATTENP +N A+ SRC + + +LT E++M +++KA+
Sbjct: 97 KLQQDTLLPHVENGSIVLIGATTENPYHDVNPAIRSRCGEIYQLKRLTKENLMELVEKAL 156
>UniRef50_A4E6Q7 Cluster: Putative uncharacterized protein; n=2;
Bacteria|Rep: Putative uncharacterized protein -
Collinsella aerofaciens ATCC 25986
Length = 454
Score = 110 bits (265), Expect = 2e-23
Identities = 56/121 (46%), Positives = 84/121 (69%), Gaps = 1/121 (0%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQ-FKNQTILFMDEIHRF 327
T+LA++I+N K + FV++SA T + D++ ++ AK + +TILF+DEIHRF
Sbjct: 72 TTLAHIIANHTKSE----FVEVSAVTGTVKDLRRVIDEAKTRLNTYDRRTILFIDEIHRF 127
Query: 328 NKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAI 507
+K QQD L VEN T+ +IGATTENP F +N+ALLSR RVV ++ L ED+ ++++A+
Sbjct: 128 SKSQQDALLHAVENRTVIMIGATTENPYFEVNSALLSRGRVVELEHLKDEDIATLIERAL 187
Query: 508 E 510
E
Sbjct: 188 E 188
>UniRef50_A0LGK0 Cluster: AAA ATPase, central domain protein; n=1;
Syntrophobacter fumaroxidans MPOB|Rep: AAA ATPase,
central domain protein - Syntrophobacter fumaroxidans
(strain DSM 10017 / MPOB)
Length = 451
Score = 110 bits (265), Expect = 2e-23
Identities = 63/153 (41%), Positives = 91/153 (59%), Gaps = 1/153 (0%)
Frame = +1
Query: 109 SDKFQKY*YFFIPITSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKND-AQF 285
S +FQ + + P S ++ I Q + LSA +G +++E V AK A+
Sbjct: 52 SRRFQSF-VLWGPPGSGKTTLAAIIAAQTQTHMIHLSAVMAGTREIREAVTEAKQVWAKQ 110
Query: 286 KNQTILFMDEIHRFNKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDK 465
K +T LFMDEIHR NK QQDT LPH+ENGT+ L+GATTENPSF + LLSR RV+V++
Sbjct: 111 KLRTWLFMDEIHRLNKAQQDTLLPHIENGTLLLLGATTENPSFEIIRPLLSRARVLVLNH 170
Query: 466 LTTEDVMVILKKAIEYNEAKLINTKETVNKSDE 564
L+ ++ I+ +A+E + L N + + E
Sbjct: 171 LSDAELGNIVHRALEDRDRGLGNFPSRLTEDAE 203
>UniRef50_Q3AA20 Cluster: ATPase, AAA family; n=4;
Clostridiales|Rep: ATPase, AAA family - Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008)
Length = 444
Score = 110 bits (264), Expect = 3e-23
Identities = 58/136 (42%), Positives = 85/136 (62%), Gaps = 1/136 (0%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKN-DAQFKNQTILFMDEIHRF 327
T+LA +I++ K F ++A TSG+ +++E++K AK + + +T+LF+DEIHRF
Sbjct: 65 TTLARIIASTTKSG----FESINAVTSGVGEIREVIKKAKEREKYYGERTVLFIDEIHRF 120
Query: 328 NKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAI 507
NK QQD LP VE GTI LIGATTENP F +N LLSR R+ L E + I+++A+
Sbjct: 121 NKAQQDALLPEVEAGTIVLIGATTENPYFEVNAPLLSRSRIFEFKPLEPEHIREIVRRAL 180
Query: 508 EYNEAKLINTKETVNK 555
E L K +++
Sbjct: 181 VDKERGLGEYKVEISE 196
>UniRef50_Q7NIS3 Cluster: Glr2109 protein; n=13; Bacteria|Rep:
Glr2109 protein - Gloeobacter violaceus
Length = 747
Score = 109 bits (263), Expect = 4e-23
Identities = 54/124 (43%), Positives = 81/124 (65%), Gaps = 1/124 (0%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKND-AQFKNQTILFMDEIHRF 327
T+LA +I+ + F+ ++A +G+ D++E + AK+ QF +TILF+DE+HRF
Sbjct: 79 TTLARIIAGTTRAH----FIAINAVLAGVKDIREAIDEAKSRRGQFGRRTILFVDEVHRF 134
Query: 328 NKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAI 507
NK QQD LP +ENGTI L+GATTENP F +N AL+SR R+ + L +ED+ + +A+
Sbjct: 135 NKSQQDALLPWIENGTIVLVGATTENPFFEVNKALVSRSRLFQLKLLESEDLRAVALQAL 194
Query: 508 EYNE 519
E
Sbjct: 195 ADTE 198
>UniRef50_Q26BL4 Cluster: ATPase related to the helicase subunit of
the holliday junction resolvase; n=8; Bacteria|Rep:
ATPase related to the helicase subunit of the holliday
junction resolvase - Flavobacteria bacterium BBFL7
Length = 431
Score = 108 bits (260), Expect = 9e-23
Identities = 59/125 (47%), Positives = 81/125 (64%), Gaps = 2/125 (1%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQF--KNQTILFMDEIHR 324
T+LAN+I+ K+ F LSA SG+ DV+E++ AK+ ILF+DEIHR
Sbjct: 54 TTLANIIAQESKRP----FYTLSAINSGVKDVREVIDKAKSAGGLFTAKNPILFIDEIHR 109
Query: 325 FNKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKA 504
F+K QQD+ L VE G +TLIGATTENPSF + ALLSRC+V V+D D+ +L +A
Sbjct: 110 FSKSQQDSLLAAVEKGWVTLIGATTENPSFEVIPALLSRCQVYVLDAFAKADLEQLLHRA 169
Query: 505 IEYNE 519
++ +E
Sbjct: 170 LKIDE 174
>UniRef50_A5DW03 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 839
Score = 108 bits (260), Expect = 9e-23
Identities = 57/114 (50%), Positives = 74/114 (64%), Gaps = 1/114 (0%)
Frame = +1
Query: 169 ISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQ-TILFMDEIHRFNKLQQD 345
I+ I K + ++V+LS S +K+ A N + Q TILF+DEIHR+NK QD
Sbjct: 233 IARIIAKSTDYRYVELSGADSNAKSLKDAFAQADNLKKLTGQRTILFLDEIHRYNKAVQD 292
Query: 346 TFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAI 507
LP +E GT T+IGATTENPSF+LNNALLSR VM+ LTT V+ IL +A+
Sbjct: 293 LLLPVIERGTCTVIGATTENPSFNLNNALLSRLHTFVMEPLTTTAVVRILHRAL 346
>UniRef50_A6PRD7 Cluster: AAA ATPase, central domain protein; n=4;
Bacteria|Rep: AAA ATPase, central domain protein -
Victivallis vadensis ATCC BAA-548
Length = 455
Score = 108 bits (259), Expect = 1e-22
Identities = 57/120 (47%), Positives = 80/120 (66%), Gaps = 1/120 (0%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDV-KEIVKIAKNDAQFKNQTILFMDEIHRF 327
TSLA VI+ + +N +FV+LS TS + DV KEI + +TILF+DEIHRF
Sbjct: 77 TSLAEVIARV----SNSEFVRLSGVTSSVADVRKEIAQAVTRRRINGRRTILFVDEIHRF 132
Query: 328 NKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAI 507
++ QQD+ LP VENG + LIGATT NP F + ALLSR V ++ LT +D++ +L++A+
Sbjct: 133 SRSQQDSLLPDVENGNVRLIGATTHNPQFYVVGALLSRSLVFLLQPLTEDDILTLLRRAV 192
>UniRef50_Q9WYX8 Cluster: UPF0189 protein TM_0508; n=4;
Thermotogaceae|Rep: UPF0189 protein TM_0508 - Thermotoga
maritima
Length = 599
Score = 108 bits (259), Expect = 1e-22
Identities = 55/130 (42%), Positives = 84/130 (64%)
Frame = +1
Query: 169 ISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDT 348
+ ++ K+ N + V LS+T G++++K ++K + ++ + +LF+DEIHR NK QQ
Sbjct: 58 VFSLLKRYFNGEVVYLSSTVHGVSEIKNVLKRGEQLRKYGKKLLLFLDEIHRLNKNQQMV 117
Query: 349 FLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIEYNEAKL 528
+ HVE G I L+ TTENPSF + ALLSRCR++ KL+ ED+M ILKKA E
Sbjct: 118 LVSHVERGDIVLVATTTENPSFVIVPALLSRCRILYFKKLSDEDLMKILKKA---TEVLN 174
Query: 529 INTKETVNKS 558
I+ +E+V K+
Sbjct: 175 IDLEESVEKA 184
>UniRef50_Q4P896 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 566
Score = 107 bits (256), Expect = 3e-22
Identities = 53/103 (51%), Positives = 73/103 (70%), Gaps = 1/103 (0%)
Frame = +1
Query: 202 KFVKLSATTSGINDVKEIVKIAKNDAQFKNQ-TILFMDEIHRFNKLQQDTFLPHVENGTI 378
+FV++SAT SG NDVK+I+ A + + Q T+LF+DEI RFN+ QQD LP VE G I
Sbjct: 99 RFVEISATNSGANDVKKILDEALHRLELTAQRTLLFIDEIQRFNRAQQDVLLPAVEKGQI 158
Query: 379 TLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAI 507
L+ ATTENPSF L +AL+SR RV V+ KL+ ++ +L+ A+
Sbjct: 159 VLVAATTENPSFRLQSALISRMRVFVLTKLSVDECCQVLRNAL 201
>UniRef50_Q5FQE1 Cluster: ATPase associated with chromosome
architecture/replication; n=63; Bacteria|Rep: ATPase
associated with chromosome architecture/replication -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 470
Score = 106 bits (255), Expect = 4e-22
Identities = 54/115 (46%), Positives = 78/115 (67%), Gaps = 1/115 (0%)
Frame = +1
Query: 169 ISNICKKQNNLKFVKLSATTSGINDVKEIVKIA-KNDAQFKNQTILFMDEIHRFNKLQQD 345
I+ + + L + ++SA SG+ D++ + A K A T+LF+DEIHRFN+ QQD
Sbjct: 103 IARLLAGRAGLFYSQISAVFSGVADLRRAFEEADKKQAATGKGTLLFVDEIHRFNRAQQD 162
Query: 346 TFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIE 510
FLP+VE GT+ L+GATTENPSF+LN ALLSRC+V+V+++L + +L A E
Sbjct: 163 GFLPYVERGTVVLVGATTENPSFALNAALLSRCQVLVLNRLDDASLESLLVHAEE 217
>UniRef50_Q3A5K5 Cluster: ATPase, AAA family; n=5;
Desulfuromonadales|Rep: ATPase, AAA family - Pelobacter
carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 726
Score = 106 bits (254), Expect = 5e-22
Identities = 55/121 (45%), Positives = 82/121 (67%), Gaps = 1/121 (0%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQ-TILFMDEIHRF 327
T+LA VI+N +FV ++A SG+ D++E ++ A+ ++ ++ TILF+DE+HR+
Sbjct: 63 TTLAQVIANSTAS----RFVSMNAVLSGVKDLREAIEDARQSQEYYDKRTILFVDEVHRW 118
Query: 328 NKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAI 507
NK QQD LP VE GTI LIGATTENP F +N AL+SR RV + LT E++ I+ + +
Sbjct: 119 NKSQQDALLPWVEKGTIILIGATTENPYFEVNKALVSRSRVFQLLGLTEENLRQIVTQTL 178
Query: 508 E 510
+
Sbjct: 179 Q 179
>UniRef50_A1A0Y3 Cluster: Putative uncharacterized protein; n=2;
Bifidobacterium adolescentis|Rep: Putative
uncharacterized protein - Bifidobacterium adolescentis
(strain ATCC 15703 / DSM 20083)
Length = 466
Score = 104 bits (249), Expect = 2e-21
Identities = 52/114 (45%), Positives = 76/114 (66%), Gaps = 1/114 (0%)
Frame = +1
Query: 169 ISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKN-QTILFMDEIHRFNKLQQD 345
++ I KQ+ F +LSA TSG+ DV++++K A + +T+LF+DE+HRF+K QQD
Sbjct: 75 LAYIVAKQSGRVFEELSAVTSGVKDVRDVLKRAHERLVSEGKETVLFIDEVHRFSKSQQD 134
Query: 346 TFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAI 507
LP VEN +T I ATTENPSFS+ LLSR VV ++ L +D+ ++ +AI
Sbjct: 135 ALLPSVENRDVTFIAATTENPSFSVIKPLLSRSVVVKLESLEPDDLKTLINRAI 188
>UniRef50_A0Q7R7 Cluster: AAA family-ATPase; n=11; Francisella
tularensis|Rep: AAA family-ATPase - Francisella
tularensis subsp. novicida (strain U112)
Length = 412
Score = 103 bits (248), Expect = 3e-21
Identities = 54/123 (43%), Positives = 83/123 (67%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFN 330
TSLA +I++ K L+F +LSA SG+ D+K+++ D Q + +LF+DEIHRFN
Sbjct: 54 TSLARIIASSKK----LEFFELSAVDSGVKDIKKLI----TDNQHLDSFVLFLDEIHRFN 105
Query: 331 KLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIE 510
K QQD LP+VE+G I LIGATTENP++ LN+AL+SR ++ + +L+ +++K +
Sbjct: 106 KSQQDILLPYVESGKIILIGATTENPTYYLNDALVSRLFILRLKRLSLVATQKLIEKTLS 165
Query: 511 YNE 519
+E
Sbjct: 166 QDE 168
>UniRef50_A5GNS9 Cluster: ATPase related to the helicase subunit of
the Holliday junction resolvase; n=30; Bacteria|Rep:
ATPase related to the helicase subunit of the Holliday
junction resolvase - Synechococcus sp. (strain WH7803)
Length = 737
Score = 101 bits (243), Expect = 1e-20
Identities = 53/121 (43%), Positives = 77/121 (63%), Gaps = 1/121 (0%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVK-EIVKIAKNDAQFKNQTILFMDEIHRF 327
T+LA +I+N F L+A +G+ D++ E+ + + + +TILF+DE+HRF
Sbjct: 72 TTLARIIAN----HTRAHFSSLNAVLAGVKDLRAEVSEAGQRLERHGLRTILFIDEVHRF 127
Query: 328 NKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAI 507
N QQD LP VENGT+TLIGATTENP F +N AL+SR R+ + LT D+ +L A+
Sbjct: 128 NSAQQDALLPWVENGTLTLIGATTENPYFEVNKALVSRSRLFRLQALTPGDLSKLLNSAL 187
Query: 508 E 510
+
Sbjct: 188 K 188
>UniRef50_Q59Y48 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 547
Score = 100 bits (240), Expect = 2e-20
Identities = 58/133 (43%), Positives = 82/133 (61%), Gaps = 8/133 (6%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIV--KIAKNDAQFKNQTI------LF 306
T+LA+VIS C L F++LSATT D+K + K KN KNQ + LF
Sbjct: 75 TTLASVISYEC----GLPFLELSATTMTTMDLKTTIMQKNQKNQKNQKNQNVGEQKIVLF 130
Query: 307 MDEIHRFNKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVM 486
+DE+HR K+QQD LP++ENG I LIGATT P+ + A+LSRC+V ++KLT +++
Sbjct: 131 IDELHRLTKIQQDWLLPYLENGEIVLIGATTIQPNTRIRQAILSRCQVFKLEKLTRKEIK 190
Query: 487 VILKKAIEYNEAK 525
+L +AI + K
Sbjct: 191 KVLCQAITFQNLK 203
>UniRef50_A5D3E6 Cluster: ATPase; n=3; Peptococcaceae|Rep: ATPase -
Pelotomaculum thermopropionicum SI
Length = 440
Score = 100 bits (239), Expect = 3e-20
Identities = 54/139 (38%), Positives = 81/139 (58%), Gaps = 1/139 (0%)
Frame = +1
Query: 136 FFIPITSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQ-TILFMD 312
FF P + +++I F ++A +G+ D+K +V+ ++ NQ TILF+D
Sbjct: 57 FFGPPGTGKTTLASIIAGMTRAHFETINAVMAGVGDIKRVVEESRERLALYNQKTILFID 116
Query: 313 EIHRFNKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVI 492
EIHRFN+ QQD LP VENG I +IG+TTENP F+++ LLSR ++ + L+ E V I
Sbjct: 117 EIHRFNRTQQDALLPFVENGQIIMIGSTTENPMFAVSRPLLSRSQLYRFEPLSDEAVRRI 176
Query: 493 LKKAIEYNEAKLINTKETV 549
L +A+ E L + V
Sbjct: 177 LTRALLDEERGLAGYRAEV 195
>UniRef50_Q2J818 Cluster: AAA ATPase, central region; n=5;
Actinomycetales|Rep: AAA ATPase, central region -
Frankia sp. (strain CcI3)
Length = 519
Score = 99 bits (238), Expect = 4e-20
Identities = 48/120 (40%), Positives = 79/120 (65%), Gaps = 1/120 (0%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKN-QTILFMDEIHRF 327
T+LA+++S + +F +LSA T+G+ DV+ ++ A+ +T+LF+DE+HRF
Sbjct: 101 TTLAHIVS----RATGRRFRELSAVTAGVKDVRAVIDEARETLSTSGARTVLFIDEVHRF 156
Query: 328 NKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAI 507
+ QQD LP VE G +TL+ ATTENP FS+ + LLSR ++ ++ LT +D+ +L +A+
Sbjct: 157 TRTQQDALLPSVERGWVTLVAATTENPFFSVVSPLLSRSLLLTLEPLTDDDIRGVLTRAL 216
>UniRef50_Q67LR0 Cluster: ATP/GTP-binding domain protein; n=21;
Bacteria|Rep: ATP/GTP-binding domain protein -
Symbiobacterium thermophilum
Length = 438
Score = 99.5 bits (237), Expect = 5e-20
Identities = 52/119 (43%), Positives = 75/119 (63%), Gaps = 1/119 (0%)
Frame = +1
Query: 196 NLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQ-TILFMDEIHRFNKLQQDTFLPHVENG 372
N F +L+A TSG+ D++ IV A+ + Q T++F+DEIHR+ K QQD LPHVE+G
Sbjct: 77 NAHFEQLNAVTSGVQDIRRIVDEARARLAERGQKTVVFIDEIHRWRKDQQDALLPHVEDG 136
Query: 373 TITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIEYNEAKLINTKETV 549
ITL+GATT+NP S+N L+SR R+ + L+ E + +L +A+ L N TV
Sbjct: 137 LITLVGATTQNPLVSVNAPLVSRTRIFELKPLSDEHIAHLLDRALRTPGRGLGNYNATV 195
>UniRef50_A5WC21 Cluster: AAA ATPase, central domain protein; n=3;
Psychrobacter|Rep: AAA ATPase, central domain protein -
Psychrobacter sp. PRwf-1
Length = 439
Score = 99.5 bits (237), Expect = 5e-20
Identities = 50/108 (46%), Positives = 70/108 (64%), Gaps = 3/108 (2%)
Frame = +1
Query: 205 FVKLSATTSGINDVKEIVKIAKNDAQFK---NQTILFMDEIHRFNKLQQDTFLPHVENGT 375
F LSA +G+ ++E++ + Q ++F+DEIHRFNK QQD L VE+G
Sbjct: 77 FYPLSAINTGVKQLREVLDAGSSSGQGGLDFASPVVFIDEIHRFNKAQQDALLGAVESGD 136
Query: 376 ITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIEYNE 519
ITLIGATTENPSFS+NNALLSRC+V + L + +L++A+ +E
Sbjct: 137 ITLIGATTENPSFSVNNALLSRCQVYRLQPLDDTQIGELLQRALSQDE 184
>UniRef50_Q0SS35 Cluster: ATPase, AAA family; n=3; Clostridium|Rep:
ATPase, AAA family - Clostridium perfringens (strain
SM101 / Type A)
Length = 415
Score = 99.1 bits (236), Expect = 7e-20
Identities = 54/137 (39%), Positives = 84/137 (61%), Gaps = 2/137 (1%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFN 330
T+LAN+ISN K KF K++ATTS I +++ I N FK IL++DE+ FN
Sbjct: 52 TTLANIISNYTDK----KFYKINATTSSIKEIQSITSDIDNLLNFKG-IILYIDELQHFN 106
Query: 331 KLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIE 510
K QQ L +E+G + LI +TTENP F+++ A+LSR + ++TED+++ L++A+
Sbjct: 107 KKQQQALLEFIEDGRVILIASTTENPYFAIHKAILSRSTIFQFKPVSTEDIIIALERAVS 166
Query: 511 --YNEAKLINTKETVNK 555
E +I+ +E V K
Sbjct: 167 KLEKEGYVISLEEGVLK 183
>UniRef50_A0Q156 Cluster: ATPase, AAA family; n=1; Clostridium novyi
NT|Rep: ATPase, AAA family - Clostridium novyi (strain
NT)
Length = 419
Score = 97.9 bits (233), Expect = 2e-19
Identities = 56/141 (39%), Positives = 88/141 (62%), Gaps = 7/141 (4%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQ-TILFMDEIHRF 327
T+LA +IS K + FVKL+AT++G+ +++E +K A+ +F + TI F+DEIH
Sbjct: 65 TTLAYIISLETKSE----FVKLNATSAGVKEIREYIKKAEEVLKFYGKRTIFFIDEIHSL 120
Query: 328 NK-LQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKA 504
K QQD L +E GT+ LIGATTENP F +N ALLSR ++ ++ L E+++ +L A
Sbjct: 121 KKGAQQDALLDAIEKGTVILIGATTENPYFEINRALLSRSKIFQLETLKEEEIIDLLYNA 180
Query: 505 IE-----YNEAKLINTKETVN 552
++ Y + K+ K+ +N
Sbjct: 181 LKDETRGYGKLKVKIHKDAIN 201
>UniRef50_A6DHI5 Cluster: ATPase, AAA family protein; n=1;
Lentisphaera araneosa HTCC2155|Rep: ATPase, AAA family
protein - Lentisphaera araneosa HTCC2155
Length = 430
Score = 97.5 bits (232), Expect = 2e-19
Identities = 57/139 (41%), Positives = 78/139 (56%), Gaps = 1/139 (0%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQ-TILFMDEIHRF 327
TSLA++IS K F+ LSA S +++V++ VK A +F + T+LF+DEIHRF
Sbjct: 60 TSLASIIS----KHTEADFIALSAIDSSVSEVRKAVKAADEARKFSGRKTVLFVDEIHRF 115
Query: 328 NKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAI 507
NK QQD+ L +ENGT+ IGATT NP F L AL SR + + L V K +
Sbjct: 116 NKAQQDSLLKDIENGTVRFIGATTHNPGFYLTPALCSRSLIFTLKPLEASAV----KSLL 171
Query: 508 EYNEAKLINTKETVNKSDE 564
E K++ E + DE
Sbjct: 172 EAKMTKIMKALEAELQFDE 190
>UniRef50_Q8CXU0 Cluster: Uncharacterized ATPase related to the
helicase subunit of the Holliday junction resolvase;
n=4; Leptospira|Rep: Uncharacterized ATPase related to
the helicase subunit of the Holliday junction resolvase
- Leptospira interrogans
Length = 423
Score = 97.1 bits (231), Expect = 3e-19
Identities = 50/148 (33%), Positives = 93/148 (62%)
Frame = +1
Query: 145 PITSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHR 324
P T + + +C+K N L FV+ +A ++G+ ++K++++ A+ + +LF+DEIHR
Sbjct: 50 PGTGKSTLAGILCRKWN-LPFVEYNAVSTGVAEIKKLLERAEREGTI----LLFLDEIHR 104
Query: 325 FNKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKA 504
F+ QQD+ L VE G + LIGATTENP+F + LLSRC+++ ++ L+ E+ +L++
Sbjct: 105 FSASQQDSLLKGVETGHLILIGATTENPAFRITRPLLSRCQILKIEPLSLEEQSSLLERG 164
Query: 505 IEYNEAKLINTKETVNKSDEPNQTIPRY 588
I+ N + ++N + + +T+ R+
Sbjct: 165 IQ-------NIEYSINLNQDAKETLIRF 185
>UniRef50_Q1D8G6 Cluster: ATPase, AAA family; n=1; Myxococcus
xanthus DK 1622|Rep: ATPase, AAA family - Myxococcus
xanthus (strain DK 1622)
Length = 444
Score = 95.5 bits (227), Expect = 9e-19
Identities = 48/103 (46%), Positives = 69/103 (66%), Gaps = 1/103 (0%)
Frame = +1
Query: 202 KFVKLSATTSGINDVKEIVKIAKN-DAQFKNQTILFMDEIHRFNKLQQDTFLPHVENGTI 378
+FV LSA + GI ++E+V A+ Q+ +T+LF+DEIHR+ K Q+ LPHVE+G
Sbjct: 81 EFVILSAVSDGIPRIREVVAEAERLRNQYSRRTVLFVDEIHRWAKNVQEQALPHVESGLF 140
Query: 379 TLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAI 507
L+GATTEN SF + AL+SRCRV + +LT D+ L +A+
Sbjct: 141 VLLGATTENVSFEVRPALVSRCRVFQLKELTVADIQSALTRAL 183
>UniRef50_Q50739 Cluster: Uncharacterized AAA domain-containing
protein Rv2559c/MT2636; n=44; Actinobacteria
(class)|Rep: Uncharacterized AAA domain-containing
protein Rv2559c/MT2636 - Mycobacterium tuberculosis
Length = 452
Score = 93.9 bits (223), Expect = 3e-18
Identities = 47/120 (39%), Positives = 77/120 (64%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFN 330
T+LA +IS + +F LSA ++G+ +V+ +++ ++ QT+LF+DE+HRF+
Sbjct: 79 TTLAALISQATGR----RFEALSALSAGVKEVRAVIENSRKALLHGEQTVLFIDEVHRFS 134
Query: 331 KLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIE 510
K QQD L VE+ + L+ ATTENPSFS+ LLSR ++ + LT ED ++++AI+
Sbjct: 135 KTQQDALLSAVEHRVVLLVAATTENPSFSVVAPLLSRSLILQLRPLTAEDTRAVVQRAID 194
>UniRef50_Q5KCD2 Cluster: Helicase, putative; n=2; Filobasidiella
neoformans|Rep: Helicase, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 397
Score = 93.1 bits (221), Expect = 5e-18
Identities = 41/73 (56%), Positives = 55/73 (75%)
Frame = +1
Query: 292 QTILFMDEIHRFNKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLT 471
+T+L +DEIHRFN+ QQD LP+VE G I LIGATTENPSF +N ALLSRC+V + +
Sbjct: 5 RTVLMIDEIHRFNRAQQDLLLPYVEKGWIQLIGATTENPSFKVNGALLSRCQVFTLHAHS 64
Query: 472 TEDVMVILKKAIE 510
E + +IL+ A++
Sbjct: 65 PESLQIILRNAVQ 77
>UniRef50_A6LJD0 Cluster: AAA ATPase, central domain protein; n=2;
Thermotogaceae|Rep: AAA ATPase, central domain protein -
Thermosipho melanesiensis BI429
Length = 410
Score = 90.2 bits (214), Expect = 3e-17
Identities = 49/124 (39%), Positives = 73/124 (58%)
Frame = +1
Query: 178 ICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDTFLP 357
I +K+ + + +A + DVK+++ A+ K ++F+DEIHRFNK QQD FLP
Sbjct: 57 IIRKKTDFEIYHFNAAVTSTIDVKKVLDYAQKVKGLKKM-LIFVDEIHRFNKKQQDIFLP 115
Query: 358 HVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIEYNEAKLINT 537
+E G IGATTENP +N ALLSR +V+ KL ++ +L++AI K I+
Sbjct: 116 GIERGDYIFIGATTENPFKMINPALLSRIKVIAFKKLKVFEIKKLLERAI---SVKNIDV 172
Query: 538 KETV 549
E+V
Sbjct: 173 MESV 176
>UniRef50_A5DZ06 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 516
Score = 90.2 bits (214), Expect = 3e-17
Identities = 50/144 (34%), Positives = 83/144 (57%), Gaps = 1/144 (0%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFN 330
T+LA +++ C + ++LSATT ++K +V ND Q Q ++F+DEIHR +
Sbjct: 70 TTLARLVAKSCGYATS-NIIELSATTLTTENIKNLV----NDCQ--EQLVVFIDEIHRLS 122
Query: 331 KLQQDTFLPHVENGTITLIGATT-ENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAI 507
K+QQD LP VE+G I LIGATT E P + A+LSRC+V + +L ++++ +L AI
Sbjct: 123 KVQQDWLLPFVEDGKIVLIGATTLETPLRRIRKAILSRCQVFPLQRLHDDELLSVLHSAI 182
Query: 508 EYNEAKLINTKETVNKSDEPNQTI 579
++ + N ++ + +
Sbjct: 183 DFENQRRSRRSRNNNNTNNDREEL 206
>UniRef50_Q6BUL9 Cluster: Similarities with CA0979|IPF19713 Candida
albicans; n=1; Debaryomyces hansenii|Rep: Similarities
with CA0979|IPF19713 Candida albicans - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 842
Score = 87.4 bits (207), Expect = 2e-16
Identities = 44/127 (34%), Positives = 76/127 (59%), Gaps = 8/127 (6%)
Frame = +1
Query: 169 ISNICKKQNNLKFVKLSATTSGINDVKEIV--------KIAKNDAQFKNQTILFMDEIHR 324
I++I ++ FV+ SAT + ++D+KE++ K +K D ++ + ++F+DEIHR
Sbjct: 209 IASILAQETGYVFVEFSATDATVSDLKELLITIEKENRKRSKKDMEYL-RVVVFIDEIHR 267
Query: 325 FNKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKA 504
F K QQD LP +E G T IGATT P + A++SRC++ + L + ++ +++ KA
Sbjct: 268 FTKTQQDFLLPFIELGVFTFIGATTLKPETRIRRAIISRCQIFQLKALESYEIDIVIHKA 327
Query: 505 IEYNEAK 525
I Y +
Sbjct: 328 ILYENIR 334
>UniRef50_A4M640 Cluster: AAA ATPase, central domain protein; n=1;
Petrotoga mobilis SJ95|Rep: AAA ATPase, central domain
protein - Petrotoga mobilis SJ95
Length = 411
Score = 85.0 bits (201), Expect = 1e-15
Identities = 49/110 (44%), Positives = 68/110 (61%)
Frame = +1
Query: 214 LSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDTFLPHVENGTITLIGA 393
+S G +K+I++ KN+ F +LF+DEIHR NK +QDT L VE G +TLIGA
Sbjct: 71 ISGAIEGKKKIKDIIE-QKNNL-FTKPKLLFVDEIHRLNKAEQDTLLLSVETGELTLIGA 128
Query: 394 TTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIEYNEAKLINTKE 543
TTENP+ S+N ALLSR V +L T+D + ++ +Y + I TKE
Sbjct: 129 TTENPAISVNPALLSRVLVFKTKELITDDYEKLFQQIEDYYKDLKI-TKE 177
>UniRef50_A5DKE6 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 572
Score = 84.2 bits (199), Expect = 2e-15
Identities = 45/141 (31%), Positives = 84/141 (59%), Gaps = 9/141 (6%)
Frame = +1
Query: 169 ISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQ-------TILFMDEIHRF 327
+++I K+ V+LSAT + ++ ++ ++ +++ + + + +F+DEIHRF
Sbjct: 137 LASIIAKEAGYVMVELSATDATVSTIRRLLNEIRDENRKRTKLGTPHLRVCVFIDEIHRF 196
Query: 328 NKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAI 507
+K+QQD LP VE G +GATT NP+ L A+ SRC++ +++LT ++V +LKKA
Sbjct: 197 SKVQQDFLLPFVEEGLFVFLGATTFNPATRLRPAIRSRCQLFKLNELTKDEVKSVLKKAA 256
Query: 508 EYNEA--KLINTKETVNKSDE 564
Y +++ K+ ++ S E
Sbjct: 257 LYENVRRRIVYGKQFLSFSSE 277
>UniRef50_Q5FKX4 Cluster: Chromosomal segregation helicase; n=113;
cellular organisms|Rep: Chromosomal segregation helicase
- Lactobacillus acidophilus
Length = 439
Score = 82.2 bits (194), Expect = 9e-15
Identities = 45/123 (36%), Positives = 72/123 (58%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFN 330
TS+A+ I+ K F KL+A T G ++++ + + + IL +DEIHR +
Sbjct: 52 TSIASAIAGSTK----YAFRKLNAATDGKKQLQQVAE----EGKMSGTVILLLDEIHRLD 103
Query: 331 KLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIE 510
K +QD LP +E+G I LIGATTENP S++ A+ SRC++ + L+ ED + +A++
Sbjct: 104 KTKQDFLLPLLESGQIILIGATTENPYISISPAIRSRCQIFELKPLSAEDASKAIDRALK 163
Query: 511 YNE 519
E
Sbjct: 164 DTE 166
>UniRef50_UPI00004999D6 Cluster: AAA family ATPase; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: AAA family ATPase - Entamoeba
histolytica HM-1:IMSS
Length = 429
Score = 80.6 bits (190), Expect = 3e-14
Identities = 48/142 (33%), Positives = 74/142 (52%), Gaps = 2/142 (1%)
Frame = +1
Query: 136 FFIPITSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVK--IAKNDAQFKNQTILFM 309
FF P + K+ F++L + N VK+ K I KN +QTI+F+
Sbjct: 66 FFGPPGCGKTTFCKLIKRHFEKSFIELDGNSINTNIVKDFKKGIIKKNKETTHSQTIIFI 125
Query: 310 DEIHRFNKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMV 489
DEIH + Q+ + ++ TI LIG TT+ PSF L+ LL RV+V+++L V
Sbjct: 126 DEIHCISSTVQNFLIDLIKEKTICLIGTTTQVPSFCLSKELLLFMRVIVLERLNEVSVKE 185
Query: 490 ILKKAIEYNEAKLINTKETVNK 555
I+K+AI +K I + E ++K
Sbjct: 186 IIKRAINAEYSKYIVSDEVIDK 207
>UniRef50_Q896F9 Cluster: ATPase associated with chromosome
architecture/replication; n=11; Bacteria|Rep: ATPase
associated with chromosome architecture/replication -
Clostridium tetani
Length = 427
Score = 80.6 bits (190), Expect = 3e-14
Identities = 42/125 (33%), Positives = 68/125 (54%)
Frame = +1
Query: 136 FFIPITSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDE 315
F+ P + ++NI + N KL+AT + + D+K I+ + + +L++DE
Sbjct: 45 FYGPPGTGKTTVANIIANRTNKTLYKLNATNASLADIKNIIADLDSFMGVEG-VVLYLDE 103
Query: 316 IHRFNKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVIL 495
I FNK QQ + L +E G ITLI +TTENP + A+LSR + L ED++ L
Sbjct: 104 IQNFNKKQQQSLLEFMEKGQITLIASTTENPYHYIYKAILSRATIFEFKSLLKEDILEAL 163
Query: 496 KKAIE 510
+A++
Sbjct: 164 NRALD 168
>UniRef50_Q2U8Q6 Cluster: ATPase related to the helicase subunit of
the Holliday junction resolvase; n=2; Aspergillus|Rep:
ATPase related to the helicase subunit of the Holliday
junction resolvase - Aspergillus oryzae
Length = 518
Score = 80.2 bits (189), Expect = 4e-14
Identities = 41/121 (33%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIA-KNDAQFKNQTILFMDEIHRF 327
T++A +I ++ ++ +F ++ +T + + + K I++ A K+ + +I+F DEIHR
Sbjct: 162 TTIARIIGDVSRR----RFYEIGSTITTVTEYKNIIEKAFKDPDKGLRPSIVFCDEIHRI 217
Query: 328 NKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAI 507
K QQD L ++ G I LIGATTENPS ++ + L+ +C V + K DV +L + +
Sbjct: 218 TKPQQDILLDAIKTGRIVLIGATTENPSLTIRHGLVYKCAVYTLTKPKDADVRKMLHRVV 277
Query: 508 E 510
E
Sbjct: 278 E 278
>UniRef50_A4EPD3 Cluster: ATPase; n=2; Rhodobacteraceae|Rep: ATPase
- Roseobacter sp. SK209-2-6
Length = 437
Score = 77.0 bits (181), Expect = 3e-13
Identities = 39/121 (32%), Positives = 72/121 (59%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFN 330
TS+A + + K+ F +L AT +G+ D++++ ++A+ + ++F+DE+HRF+
Sbjct: 64 TSIARAVGEMLNKE----FKQLHATRAGVKDIRQLA----DEARIR-PILIFVDEVHRFS 114
Query: 331 KLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIE 510
Q D L E GT IGATT+NP +L AL+SR ++ ++ + ED+ +L + +E
Sbjct: 115 ATQADDLLSICEEGTADFIGATTQNPYTALPKALVSRSTILKLEPIAIEDMEAVLARGLE 174
Query: 511 Y 513
+
Sbjct: 175 H 175
>UniRef50_A3LTW2 Cluster: Replication factor ATPase; n=1; Pichia
stipitis|Rep: Replication factor ATPase - Pichia
stipitis (Yeast)
Length = 786
Score = 77.0 bits (181), Expect = 3e-13
Identities = 43/132 (32%), Positives = 76/132 (57%), Gaps = 7/132 (5%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVK--IAKNDAQFKN-----QTILFM 309
T++A++I+ C FV+LSAT + + D++++ +A+N + + ++F+
Sbjct: 72 TTMASIIAEEC----GYVFVELSATAATVADLRDLSTTIMAENRKRASRGEEELKVVVFI 127
Query: 310 DEIHRFNKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMV 489
DEIHRF QQD LP+VE G IGATT +P + A+LSR + ++ L +V+
Sbjct: 128 DEIHRFTVSQQDFLLPYVEEGNFVFIGATTIDPRKRIRRAILSRVQCFSLNTLNNNEVLE 187
Query: 490 ILKKAIEYNEAK 525
+LK+A+ + +
Sbjct: 188 VLKRAMRFENIR 199
>UniRef50_A6QCT9 Cluster: ATPase, AAA family; n=22;
Epsilonproteobacteria|Rep: ATPase, AAA family -
Sulfurovum sp. (strain NBC37-1)
Length = 393
Score = 75.8 bits (178), Expect = 8e-13
Identities = 43/119 (36%), Positives = 71/119 (59%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFN 330
T+LA +I+ Q F +++ATT I+D+++I K N Q + ++F+DE+HR +
Sbjct: 52 TTLARIIAT----QLGRPFYEMNATTLKIDDLRKIFKEYANALQ---KPLIFIDEVHRLS 104
Query: 331 KLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAI 507
K QQ+ LP +EN +IGA+TENP +SL A+ SR + ++ L +++ L K I
Sbjct: 105 KNQQEVLLPFMENNAALVIGASTENPYYSLTAAMRSRSHLFELEALKQKEMQDYLAKII 163
>UniRef50_Q5FK52 Cluster: Chromosome segregation helicase; n=3;
Lactobacillus|Rep: Chromosome segregation helicase -
Lactobacillus acidophilus
Length = 429
Score = 74.9 bits (176), Expect = 1e-12
Identities = 43/120 (35%), Positives = 69/120 (57%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFN 330
T+LA V+S + L F K +A+ + ++++++ D F +L +DEIHR
Sbjct: 55 TTLAYVMSQTLR----LPFEKFNASIQNKSQLQKLIQ-KHPDESF----VLLLDEIHRLT 105
Query: 331 KLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIE 510
K QD LP++ENG + L+G TTENP S+ A+ SRC++ + ED+ ++L KA E
Sbjct: 106 KPIQDYLLPYLENGHVLLVGTTTENPIMSIQPAIRSRCQIFEFYPIKAEDIELVLIKAAE 165
>UniRef50_A5V6U8 Cluster: AAA ATPase, central domain protein; n=1;
Sphingomonas wittichii RW1|Rep: AAA ATPase, central
domain protein - Sphingomonas wittichii RW1
Length = 444
Score = 74.5 bits (175), Expect = 2e-12
Identities = 45/131 (34%), Positives = 74/131 (56%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFN 330
T+LA +++++ ++F SAT + +K AK + +T+LF+DE HR
Sbjct: 71 TTLARLLADLV----GMRFEAFSATDVTVAGLKAAYAEAKRHLRMGKRTVLFLDESHRAA 126
Query: 331 KLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIE 510
+ +T LP +E+GTIT I ATTE PSF+L + SR RV+ ++ L T + +L +A +
Sbjct: 127 RNITETLLPVMEDGTITAILATTEAPSFTLPKGITSRARVLTLNPLDTGGLTQLLDRAEQ 186
Query: 511 YNEAKLINTKE 543
+ +L T E
Sbjct: 187 HCGVQLNLTDE 197
>UniRef50_Q6QN33 Cluster: AAA type ATPase; n=6; Mollicutes|Rep: AAA
type ATPase - Aster yellows witches'-broom phytoplasma
Length = 414
Score = 74.1 bits (174), Expect = 2e-12
Identities = 37/105 (35%), Positives = 65/105 (61%)
Frame = +1
Query: 193 NNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDTFLPHVENG 372
N+L+ +K + I+ ++ KI + FK + IL ++EIHR NK +QD L ++ENG
Sbjct: 63 NDLQ-IKYDIFNAAIDKKSKLEKIIQQALNFK-KFILIIEEIHRMNKDRQDILLQYLENG 120
Query: 373 TITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAI 507
+ + TTENP F +N ++ SR ++ ++++TTE+++ L K I
Sbjct: 121 HLIMFACTTENPYFVINPSIRSRVNIIKLERITTEEMLTGLNKLI 165
>UniRef50_Q8EWR1 Cluster: Predicted ATPase; n=1; Mycoplasma
penetrans|Rep: Predicted ATPase - Mycoplasma penetrans
Length = 409
Score = 72.1 bits (169), Expect = 9e-12
Identities = 46/149 (30%), Positives = 80/149 (53%)
Frame = +1
Query: 88 VASLCDESDKFQKY*YFFIPITSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIA 267
+ ++ + +D F +F P + I I KK N F ++TT+ ND+ EI+++A
Sbjct: 30 IINMIENNDLFSIL-FFGNPGVGKSASIQFILKKLNK-NFYYFNSTTNNKNDLLEILELA 87
Query: 268 KNDAQFKNQTILFMDEIHRFNKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCR 447
D N+ I+ ++EIHR NK +QD L ++E I ++ TTENP F +N A+ SR
Sbjct: 88 TED----NKPIIIIEEIHRLNKDKQDLLLMYLEKDMIIVLATTTENPFFKVNPAIRSRLL 143
Query: 448 VVVMDKLTTEDVMVILKKAIEYNEAKLIN 534
+ ++ + + + + K +E + KL N
Sbjct: 144 LYRIENINSAVLKEEVIKYLENKKVKLSN 172
>UniRef50_A1VDA3 Cluster: AAA ATPase, central domain protein; n=4;
Desulfovibrionaceae|Rep: AAA ATPase, central domain
protein - Desulfovibrio vulgaris subsp. vulgaris (strain
DP4)
Length = 411
Score = 72.1 bits (169), Expect = 9e-12
Identities = 39/122 (31%), Positives = 69/122 (56%)
Frame = +1
Query: 163 NVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQ 342
+ ++ + K + ++LSA +G+ +++ Q IL +DE+HRF+K QQ
Sbjct: 52 STLALLLAKARSANVLRLSAPEAGLQHLRK---------QLHGVDILVLDELHRFSKAQQ 102
Query: 343 DTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIEYNEA 522
D FLP +E+G IT++ TTENPSFS+ LLSR V+ + L +++ + ++ E
Sbjct: 103 DFFLPLLESGDITMLATTTENPSFSVTRQLLSRLHVLRLRPLGRAELLELGRRGAVAQEV 162
Query: 523 KL 528
++
Sbjct: 163 QI 164
>UniRef50_Q043K3 Cluster: Helicase subunit of the Holliday junction
resolvase related ATPase; n=1; Lactobacillus gasseri
ATCC 33323|Rep: Helicase subunit of the Holliday
junction resolvase related ATPase - Lactobacillus
gasseri (strain ATCC 33323 / DSM 20243)
Length = 429
Score = 70.9 bits (166), Expect = 2e-11
Identities = 33/71 (46%), Positives = 47/71 (66%)
Frame = +1
Query: 298 ILFMDEIHRFNKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTE 477
+L +DEIHR QD LP++ENG I LIGATTENP S+ A+ SRC++ L+ E
Sbjct: 98 VLLIDEIHRMTTTLQDFLLPYLENGRILLIGATTENPIMSIVPAVRSRCQIFEFKALSDE 157
Query: 478 DVMVILKKAIE 510
D+ +L +A++
Sbjct: 158 DIEQVLIRALK 168
>UniRef50_Q9PQU7 Cluster: Conserved hypothetical ATP/GTP-binding
protein; n=1; Ureaplasma parvum|Rep: Conserved
hypothetical ATP/GTP-binding protein - Ureaplasma parvum
(Ureaplasma urealyticum biotype 1)
Length = 408
Score = 68.9 bits (161), Expect = 9e-11
Identities = 35/95 (36%), Positives = 54/95 (56%)
Frame = +1
Query: 235 INDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDTFLPHVENGTITLIGATTENPSF 414
++ K++++I + N I+ +DEIHR NK +QD LP +E I L TTENP F
Sbjct: 75 VDSKKQLMQIIEQALDLNN-FIIIIDEIHRLNKDKQDILLPIIEANKIKLFATTTENPFF 133
Query: 415 SLNNALLSRCRVVVMDKLTTEDVMVILKKAIEYNE 519
+N AL SRC+++ + LT+ + +K I E
Sbjct: 134 VINPALRSRCQLLSLKPLTSSQISERIKTLINVEE 168
>UniRef50_A0RRQ8 Cluster: ATPase, AAA family; n=3;
Campylobacter|Rep: ATPase, AAA family - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 397
Score = 67.3 bits (157), Expect = 3e-10
Identities = 35/111 (31%), Positives = 64/111 (57%)
Frame = +1
Query: 169 ISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDT 348
++ I KQ N +F +L D+++I I+K + + ++F+DE HR +K QQ+T
Sbjct: 50 MAKIIAKQMNYEFFELDGANLKSEDIRKI--ISKFETTLY-KPLIFIDEFHRLSKTQQET 106
Query: 349 FLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKK 501
L +E G ++GATTENP F +++ + SR + L+ +++ ++L K
Sbjct: 107 LLIPMEKGKCIVMGATTENPKFVVSSGIRSRMMIFEFKPLSHDELTILLTK 157
>UniRef50_Q7QUE5 Cluster: GLP_59_18656_20185; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_59_18656_20185 - Giardia lamblia
ATCC 50803
Length = 509
Score = 66.1 bits (154), Expect = 6e-10
Identities = 35/103 (33%), Positives = 58/103 (56%)
Frame = +1
Query: 199 LKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDTFLPHVENGTI 378
++F AT + +N V E + + ++ + LF+DE HR K QQD L VE G +
Sbjct: 167 IEFKPGQATVAELNKVTERIYTDRANSLTSARVCLFVDEAHRCTKAQQDRLLSAVEEGVL 226
Query: 379 TLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAI 507
TLI ATT +P ++ L SRC ++ + LT++D++ I + +
Sbjct: 227 TLILATTSSPYTAIIEGLRSRCFLLSFNALTSKDILQICVRGL 269
>UniRef50_Q7NAV9 Cluster: Predicted ATP/GTPase; n=1; Mycoplasma
gallisepticum|Rep: Predicted ATP/GTPase - Mycoplasma
gallisepticum
Length = 413
Score = 60.5 bits (140), Expect = 3e-08
Identities = 31/114 (27%), Positives = 61/114 (53%)
Frame = +1
Query: 169 ISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDT 348
+ NI + NL ++ + + ++K+ + AK NQ ++ +DEIHR ++ +QD
Sbjct: 58 LCNILISEMNLPSFSFNSASDSLQELKQFISKAKE----LNQCVIIIDEIHRLHRDKQDL 113
Query: 349 FLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIE 510
+ ++ + L G TTENP F++N A+ SR + + T+ ++ KK ++
Sbjct: 114 LIKGLDAKSFILFGITTENPYFTINPAIRSRVHTIELVNPTSIELFEGYKKIVQ 167
>UniRef50_A5IXK5 Cluster: ATPase, AAA family; n=1; Mycoplasma
agalactiae|Rep: ATPase, AAA family - Mycoplasma
agalactiae
Length = 404
Score = 59.3 bits (137), Expect = 7e-08
Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Frame = +1
Query: 208 VKLSATTSGINDVKEIVK-IAKNDAQFKNQTILFMDEIHRFNKLQQDTFLPHVENGTITL 384
+K + +N E++K +A ND +L +DEIHR NK +QD L ++E I +
Sbjct: 61 LKYDYFNASVNSKAELIKMLADND-------VLIIDEIHRLNKDKQDILLSYLEFDKIII 113
Query: 385 IGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILK 498
TTENP F +N AL SR +++ KL+ +++ +K
Sbjct: 114 YATTTENPYFRVNPALRSRMQILQFTKLSEQEMFEGIK 151
>UniRef50_Q6KHC7 Cluster: ATPase; n=1; Mycoplasma mobile|Rep: ATPase
- Mycoplasma mobile
Length = 372
Score = 58.8 bits (136), Expect = 9e-08
Identities = 29/77 (37%), Positives = 47/77 (61%)
Frame = +1
Query: 298 ILFMDEIHRFNKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTE 477
IL +DE+HR NK +Q+ L ++E+ I L TTENP F + +L SR +++ +KL+
Sbjct: 51 ILIIDELHRLNKDKQEILLSYLEDDKIILYATTTENPYFKIIPSLRSRLKILRFNKLSET 110
Query: 478 DVMVILKKAIEYNEAKL 528
++ LK IE + K+
Sbjct: 111 EIFQGLKNIIEKYKLKI 127
>UniRef50_A3ERK9 Cluster: ATPase related to the helicase subunit of
the Holliday junction resolvase; n=1; Leptospirillum sp.
Group II UBA|Rep: ATPase related to the helicase subunit
of the Holliday junction resolvase - Leptospirillum sp.
Group II UBA
Length = 444
Score = 54.0 bits (124), Expect = 3e-06
Identities = 29/107 (27%), Positives = 56/107 (52%)
Frame = +1
Query: 205 FVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDTFLPHVENGTITL 384
F + A S ++K+ + + Q +L ++EI RF + QQD +P +E G + L
Sbjct: 75 FEVVRAGESSGGELKKAIDRGVSYRQSGQDCLLVIEEIDRFTRTQQDVLVPALERGDLLL 134
Query: 385 IGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIEYNEAK 525
+G + +NP +L L SR + L+ ED++ +L++ ++ E +
Sbjct: 135 LGLSFDNPLRALLPPLASRLLLFSFQPLSPEDLLTLLERGRQFLEKR 181
>UniRef50_A5K4E2 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 677
Score = 53.6 bits (123), Expect = 4e-06
Identities = 39/120 (32%), Positives = 64/120 (53%), Gaps = 1/120 (0%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIV-KIAKNDAQFKNQTILFMDEIHRF 327
+SL NVI N K NNL F+ L + N++++I + N K +TIL + +I+R
Sbjct: 256 SSLVNVIKN---KTNNL-FISLFHLNNLNNELRKIYDQSVINYKLSKKKTILCIKDINRL 311
Query: 328 NKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAI 507
NK QQ+ L ++ G L+ NP LN +L SRC + ++ ++ +I+K+ I
Sbjct: 312 NKNQQENLLLILKKGYFYLLATCLFNPMNILNASLSSRCLYLYLNPYDKIELALIIKRII 371
>UniRef50_Q8IIN7 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 707
Score = 50.4 bits (115), Expect = 3e-05
Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIV-KIAKNDAQFKNQTILFMDEIHRF 327
+SL NVI N K NN F+ L + N+++++ K N K ++IL + +I+R
Sbjct: 227 SSLVNVIRN---KTNNC-FISLFHLNNLNNELRKVYDKSVINYKISKKKSILCIKDINRL 282
Query: 328 NKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKK 501
NK QQ+ L ++ G L+ NP LN +L SRC + ++ ++ +I+K+
Sbjct: 283 NKSQQENLLLILKKGYFYLLATCLFNPMNILNASLSSRCLYLYLNSYEKTELELIIKR 340
>UniRef50_Q7RDE2 Cluster: Putative helicase RUVBL; n=5; Plasmodium
(Vinckeia)|Rep: Putative helicase RUVBL - Plasmodium
yoelii yoelii
Length = 595
Score = 45.6 bits (103), Expect = 0.001
Identities = 36/120 (30%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIV-KIAKNDAQFKNQTILFMDEIHRF 327
+SL NVI N K +NL F+ L + +++ I + N K + IL + +I+R
Sbjct: 206 SSLINVIKN---KTHNL-FITLFHLNNFNTEIRRIYDQSIINYKLSKRRMILCIKDINRL 261
Query: 328 NKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAI 507
NK QQ+ L ++ G L+ NP LN +L SRC + + ++ +I+K+ I
Sbjct: 262 NKPQQEHLLLVLKKGYFYLLATCLYNPMNILNASLSSRCLYLYLSPYDKIELALIIKRII 321
>UniRef50_Q67J53 Cluster: Lon-like ATP-dependent protease; n=14;
Firmicutes|Rep: Lon-like ATP-dependent protease -
Symbiobacterium thermophilum
Length = 659
Score = 42.3 bits (95), Expect(2) = 0.002
Identities = 24/56 (42%), Positives = 33/56 (58%)
Frame = +1
Query: 382 LIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIEYNEAKLINTKETV 549
LIGATT +P +N AL SRC V + LT ED+ +I+++A E A L E +
Sbjct: 361 LIGATTRDPE-DINPALRSRCAEVFFEPLTPEDIALIVRQAAERIGAHLAAGVEAI 415
Score = 21.8 bits (44), Expect(2) = 0.002
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 298 ILFMDEIHRFNKLQQDTFLPHVENGTIT 381
+LF+DEI + L Q L +E+ +T
Sbjct: 303 VLFIDEIGEMDPLLQTKLLKVLEDKRVT 330
>UniRef50_A6MVQ4 Cluster: DNA polymerase III; n=1; Rhodomonas
salina|Rep: DNA polymerase III - Rhodomonas salina
(Cryptomonas salina)
Length = 370
Score = 42.7 bits (96), Expect = 0.007
Identities = 31/144 (21%), Positives = 63/144 (43%), Gaps = 7/144 (4%)
Frame = +1
Query: 142 IPITSLANVISNICKKQNNLK------FVKLSAT-TSGINDVKEIVKIAKNDAQFKNQTI 300
I TS N N+C+ N+ F ++ A +GI +++EI++ + +
Sbjct: 64 INCTSSKNTPCNVCENCVNIHLGRSFDFYEIDAAKNTGIENIREIIEKVQYSPIMSKYKV 123
Query: 301 LFMDEIHRFNKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTED 480
+DE H + ++ L +E+ I + + + N ++SRC+ + + D
Sbjct: 124 CIIDEAHMLSINAFNSLLKTLESPPINTVFILSTTAVNKIPNTIISRCQKLYFQPIRDHD 183
Query: 481 VMVILKKAIEYNEAKLINTKETVN 552
+++ + K + YNE I K N
Sbjct: 184 LIIGITKVV-YNEKLRITNKGIEN 206
>UniRef50_Q97FT8 Cluster: Lon-like ATP-dependent protease; n=1;
Clostridium acetobutylicum|Rep: Lon-like ATP-dependent
protease - Clostridium acetobutylicum
Length = 566
Score = 39.5 bits (88), Expect(2) = 0.013
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +1
Query: 382 LIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIE 510
LIGATT+NP +N A+ SRC + L E++ +I K A+E
Sbjct: 238 LIGATTKNPE-EINPAIRSRCIEIFFRALDAEEIKIIAKNAVE 279
Score = 21.4 bits (43), Expect(2) = 0.013
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +1
Query: 298 ILFMDEIHRFNKLQQDTFLPHVEN 369
+LF+DEI N ++ + L +E+
Sbjct: 180 VLFIDEIGELNPIEMNKLLKVMED 203
>UniRef50_Q5PAJ8 Cluster: ATP-dependent clp protease ATP-binding
subunit; n=16; Alphaproteobacteria|Rep: ATP-dependent
clp protease ATP-binding subunit - Anaplasma marginale
(strain St. Maries)
Length = 781
Score = 41.5 bits (93), Expect = 0.015
Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 13/132 (9%)
Frame = +1
Query: 163 NVISNI-CKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRF---- 327
N++ + C + +L L A T D +E +K + K +LF+DEIH
Sbjct: 260 NIVPQLKCVEIYSLDMGSLLAGTRYRGDFEERIKAVIRAIENKKNAVLFIDEIHTIIGAG 319
Query: 328 ----NKLQQDTFL-PHVENGTITLIGATT---ENPSFSLNNALLSRCRVVVMDKLTTEDV 483
+ L L P + G+I IGATT N +F + AL R + + +++ T E+
Sbjct: 320 STSGSPLDASNLLKPALARGSIRCIGATTYKEYNSNFEKDRALARRYQKINVEESTVEET 379
Query: 484 MVILKKAIEYNE 519
+ IL Y E
Sbjct: 380 IQILSGIKSYYE 391
>UniRef50_Q97CY0 Cluster: Lon-like ATP-dependent protease; n=8;
Clostridiales|Rep: Lon-like ATP-dependent protease -
Clostridium acetobutylicum
Length = 634
Score = 40.7 bits (91), Expect = 0.027
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +1
Query: 382 LIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIE 510
LIGATT++PS +N+AL SRC V + L++ D+M I+ A +
Sbjct: 345 LIGATTKDPS-EINSALRSRCTEVYFEPLSSSDIMDIIDNAAD 386
>UniRef50_Q46HP5 Cluster: DNA polymerase III, delta prime subunit;
n=2; Prochlorococcus marinus|Rep: DNA polymerase III,
delta prime subunit - Prochlorococcus marinus (strain
NATL2A)
Length = 319
Score = 40.3 bits (90), Expect = 0.035
Identities = 23/90 (25%), Positives = 44/90 (48%)
Frame = +1
Query: 235 INDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDTFLPHVENGTITLIGATTENPSF 414
+N +KEI++ ++I+ +++I R N+ + L +E L T+ P
Sbjct: 107 LNQIKEIIEFLGKKPFESERSIVIIEDIERINESAANALLKTLEETCTGLFILITQRPE- 165
Query: 415 SLNNALLSRCRVVVMDKLTTEDVMVILKKA 504
L + + SRC++V +L V I+KK+
Sbjct: 166 KLLSTIRSRCQIVPFIRLNDNQVNKIIKKS 195
>UniRef50_Q7NAN5 Cluster: DnaX; n=1; Mycoplasma gallisepticum|Rep:
DnaX - Mycoplasma gallisepticum
Length = 624
Score = 39.9 bits (89), Expect = 0.047
Identities = 24/106 (22%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Frame = +1
Query: 217 SATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDTFLPHVENGT--ITLIG 390
+AT +G++++++I+ ++ + +DE H + + L +E + I
Sbjct: 116 AATNNGVDEIRKIIDAINYAPMNLSKKVYILDEAHMLSNGAWNALLKTLEEPPKHVVFIF 175
Query: 391 ATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIEYNEAKL 528
ATTE L ++SRC+ KL +D++ +LK ++ + K+
Sbjct: 176 ATTEFHKIPLT--VVSRCQSFNFKKLDKDDLVDVLKNVVKQEKIKI 219
>UniRef50_Q1WR72 Cluster: ATP-dependent Clp protease; n=1;
Lactobacillus salivarius subsp. salivarius UCC118|Rep:
ATP-dependent Clp protease - Lactobacillus salivarius
subsp. salivarius (strain UCC118)
Length = 606
Score = 39.9 bits (89), Expect = 0.047
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 12/121 (9%)
Frame = +1
Query: 169 ISNICKKQNNLKFVKLSATTSGINDV-KEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQ- 342
++ + +K N + L G DV ++++ I K Q K +TILF+DEIH
Sbjct: 75 LNQVGEKLKNKQIRVLQIAALGQQDVVRKMLNIIKECKQTKGRTILFIDEIHTIMGADTS 134
Query: 343 -------DTFLPHVENGTITLIGATT--ENPSF-SLNNALLSRCRVVVMDKLTTEDVMVI 492
D P + G I LIGATT E F + AL R + +++++ + +D + +
Sbjct: 135 NGAMDLGDVLKPAMARGEIQLIGATTFDEYDKFIEKDPALERRFQQILVNEPSRDDAVKV 194
Query: 493 L 495
L
Sbjct: 195 L 195
>UniRef50_Q1FKE1 Cluster: DNA polymerase III, subunits gamma and
tau; n=4; Clostridiales|Rep: DNA polymerase III,
subunits gamma and tau - Clostridium phytofermentans
ISDg
Length = 522
Score = 39.9 bits (89), Expect = 0.047
Identities = 31/123 (25%), Positives = 62/123 (50%), Gaps = 8/123 (6%)
Frame = +1
Query: 184 KKQNNLKFVKL-SATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDTFLPH 360
+ Q+++ +++ +A+ +G+++++EIV+ K N + +DE+H + + L
Sbjct: 83 QSQSSMNVIEIDAASNNGVDNIREIVEEVKYSPTEGNYKVYIIDEVHMLSAGAFNALLKT 142
Query: 361 VEN--GTITLIGATTENPSFSLNNALLSRC-----RVVVMDKLTTEDVMVILKKAIEYNE 519
+E + I ATTE + +LSRC R V +D++T ++ K+ IE E
Sbjct: 143 LEEPPSYVIFILATTEVHKIPI--TILSRCQRYDFRRVTIDEITKRLRVITEKEGIEAEE 200
Query: 520 AKL 528
L
Sbjct: 201 KAL 203
>UniRef50_Q18C99 Cluster: DNA polymerase III subunit gamma/tau; n=2;
Clostridium difficile|Rep: DNA polymerase III subunit
gamma/tau - Clostridium difficile (strain 630)
Length = 545
Score = 39.1 bits (87), Expect = 0.081
Identities = 26/111 (23%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
Frame = +1
Query: 187 KQNNLKFVKL-SATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDTFLPHV 363
K N + V++ +A+ + ++D++E+ + K + +DE+H ++ + L +
Sbjct: 83 KDNTMDVVEIDAASNNSVDDIRELRESVKYSPANAKYKVYIIDEVHMLSQGAFNALLKTL 142
Query: 364 EN--GTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIE 510
E + I ATTE + +LSRC+ ++T +D+ + +KK E
Sbjct: 143 EEPPSYVIFILATTE--PHKIPATILSRCQRYDFKRVTVKDMTLRMKKICE 191
>UniRef50_Q8EUW0 Cluster: DNA polymerase III gamma-tau subunits;
n=1; Mycoplasma penetrans|Rep: DNA polymerase III
gamma-tau subunits - Mycoplasma penetrans
Length = 804
Score = 38.7 bits (86), Expect = 0.11
Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 3/121 (2%)
Frame = +1
Query: 175 NICKKQNNLKFVKL-SATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDTF 351
N+ + + V+L +A+ +G+ +V+ I+ + +DE H + +TF
Sbjct: 81 NLINQNQAVDIVELDAASNNGVGEVRNIIDTINYLPSVLKYKVYIIDEAHMLSNAAWNTF 140
Query: 352 LPHVENGT--ITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIEYNEAK 525
L +E+ + I ATTE S+ ++SRC+ KL ++ LK + + K
Sbjct: 141 LKLIEDPPKYLVFIFATTE--SYKFPPTIISRCQRYNFLKLNNSELKECLKSIAKKEKIK 198
Query: 526 L 528
+
Sbjct: 199 V 199
>UniRef50_Q7RJ00 Cluster: Putative uncharacterized protein PY03466;
n=8; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY03466 - Plasmodium yoelii yoelii
Length = 1860
Score = 38.7 bits (86), Expect = 0.11
Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 10/140 (7%)
Frame = +1
Query: 169 ISNICKKQNNLKFVKLSATTSGIND-VKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQD 345
I++I QN L ++ T N + + N F N+++L + + +NK +D
Sbjct: 1426 INHITNDQNKLNNTIINERTKTTNSTINNNLDTLLNSHLFNNRSLLLKENNNNYNKTIED 1485
Query: 346 TFLPHVENGTITL---IGATTENPSFSLNNALLSRCRV--VVMDKLTTEDVMVILKKAIE 510
+P + + I L T N S NN +MD TT D+ I+ AIE
Sbjct: 1486 NNVPDLSSSNIYLKNDNNLTEYNSSTDDNNMFQKYIHENNKLMDSSTTLDIKSIIDNAIE 1545
Query: 511 YNEAKL----INTKETVNKS 558
N + +N T+N +
Sbjct: 1546 INHGTIGSDEMNFTSTINSN 1565
>UniRef50_A0RNV1 Cluster: ATP-dependent Clp protease ATP-binding
subunit ClpA; n=1; Campylobacter fetus subsp. fetus
82-40|Rep: ATP-dependent Clp protease ATP-binding
subunit ClpA - Campylobacter fetus subsp. fetus (strain
82-40)
Length = 732
Score = 38.3 bits (85), Expect = 0.14
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Frame = +1
Query: 196 NLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRF--------NKLQQDTF 351
NL L A + +E +K + + I+F+DEIH N L
Sbjct: 205 NLDVSSLIAGAKYRGEFEERLKSIISKLKENKNHIIFIDEIHSIMSQNSSNENSLDVANI 264
Query: 352 L-PHVENGTITLIGATT--ENPSFSLNNALLSRCRVVVMDKLTTEDVMVILK 498
L PH+ NG I IGATT E +F+ + ALL R + + + ++ +ILK
Sbjct: 265 LKPHLANGDIRCIGATTYSEFRNFNKDKALLRRFNKIDVSEPNPDECFLILK 316
>UniRef50_P47658 Cluster: DNA polymerase III subunit gamma/tau; n=3;
Mycoplasma genitalium|Rep: DNA polymerase III subunit
gamma/tau - Mycoplasma genitalium
Length = 597
Score = 38.3 bits (85), Expect = 0.14
Identities = 29/124 (23%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Frame = +1
Query: 175 NICKKQNNLKFVKL----SATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQ 342
++CK N + + +A+ +GIND++E+V+ N + + +DE H
Sbjct: 76 DVCKSINTNSAIDIVEIDAASKNGINDIRELVENVFNHPFTFKKKVYILDEAHMLTTQSW 135
Query: 343 DTFLPHVENGT--ITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIEYN 516
L +E + I TTE L +LSRC+ K+T++ ++ L +
Sbjct: 136 GGLLKTLEESPPYVLFIFTTTEFNKIPL--TILSRCQSFFFKKITSDLILERLNDIAKKE 193
Query: 517 EAKL 528
+ K+
Sbjct: 194 KIKI 197
>UniRef50_Q8A7B5 Cluster: DNA polymerase III subunit gamma/tau; n=6;
Bacteroidales|Rep: DNA polymerase III subunit gamma/tau
- Bacteroides thetaiotaomicron
Length = 619
Score = 37.9 bits (84), Expect = 0.19
Identities = 17/90 (18%), Positives = 43/90 (47%)
Frame = +1
Query: 217 SATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDTFLPHVENGTITLIGAT 396
+A+ + ++D++++V+ + Q + +DE+H + + FL +E I
Sbjct: 97 AASNNSVDDIRQLVEQVRIPPQIGKYKVYIIDEVHMLSASAFNAFLKTLEEPPRHAIFIL 156
Query: 397 TENPSFSLNNALLSRCRVVVMDKLTTEDVM 486
+ +LSRC++ ++++ ED +
Sbjct: 157 ATTEKHKILPTILSRCQIYDFNRISVEDTV 186
>UniRef50_Q73KU3 Cluster: ATP-dependent Clp protease, ATP-binding
subunit ClpA; n=1; Treponema denticola|Rep:
ATP-dependent Clp protease, ATP-binding subunit ClpA -
Treponema denticola
Length = 785
Score = 37.9 bits (84), Expect = 0.19
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 13/126 (10%)
Frame = +1
Query: 160 ANVISNICKKQN--NLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNK 333
AN + + K N +L L A D +E +K ++ + ILF+DEIH
Sbjct: 255 ANKVPSFLKNANIYSLSLSDLLAGAKFRGDFEERLKRIVSEISREKNAILFIDEIHTIVN 314
Query: 334 LQQ--------DTFLPHVENGTITLIGATT---ENPSFSLNNALLSRCRVVVMDKLTTED 480
D P + NG + IGATT N F+ + AL R + + +++ E+
Sbjct: 315 ANSGGGGIEAPDLLKPILANGKVRCIGATTFEEYNKHFTKDAALARRFQKIDIEEPNEEE 374
Query: 481 VMVILK 498
+ ILK
Sbjct: 375 AVKILK 380
>UniRef50_Q4FNB0 Cluster: DNA-directed DNA polymerase gamma/tau
subunit; n=2; Candidatus Pelagibacter ubique|Rep:
DNA-directed DNA polymerase gamma/tau subunit -
Pelagibacter ubique
Length = 557
Score = 37.9 bits (84), Expect = 0.19
Identities = 32/149 (21%), Positives = 71/149 (47%), Gaps = 3/149 (2%)
Frame = +1
Query: 175 NICKKQNNLKFVKLSATT-SGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDTF 351
N N++ +++ A + +G++DV+++++ ++ I +DE+H +K +
Sbjct: 83 NAISNSNHIDVLEMDAASKTGVDDVRDLIEFSRYGPTTAKYKIFIIDEVHMLSKQAFNAL 142
Query: 352 LPHVENGT--ITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIEYNEAK 525
L +E + I ATTE + ++SRC+ + ++ + ++ ++K
Sbjct: 143 LKTLEEPPEYLKFIFATTEIKKIPI--TVVSRCQRFDLSRIKSLELFDFIRK-------- 192
Query: 526 LINTKETVNKSDEPNQTIPRYLIEEASLQ 612
I KE N SD+ + I + I E S++
Sbjct: 193 -IKEKENGNASDDALKLIVK--ISEGSVR 218
>UniRef50_Q0B0W5 Cluster: DNA-directed DNA polymerase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
DNA-directed DNA polymerase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 499
Score = 37.9 bits (84), Expect = 0.19
Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 7/108 (6%)
Frame = +1
Query: 181 CKKQNNLKFVKL----SATTSGINDVKEI-VKIAKNDAQFKNQTILFMDEIHRFNKLQQD 345
C+ NN F+ + +A+ GI++++++ K+ AQ KN+ + +DE+H +
Sbjct: 79 CQDINNGNFMDVIEIDAASNRGIDEIRDLREKVRVLPAQGKNK-VYIIDEVHMLTTEAFN 137
Query: 346 TFLPHVEN--GTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDV 483
L +E + I ATTE S + + SRC+V +LTT ++
Sbjct: 138 ALLKTIEEPPDAVIFILATTE--SHKIPATIRSRCQVYNFRRLTTAEI 183
>UniRef50_A7M2L2 Cluster: Putative uncharacterized protein; n=2;
Bacteroides|Rep: Putative uncharacterized protein -
Bacteroides ovatus ATCC 8483
Length = 621
Score = 37.9 bits (84), Expect = 0.19
Identities = 17/90 (18%), Positives = 43/90 (47%)
Frame = +1
Query: 217 SATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDTFLPHVENGTITLIGAT 396
+A+ + ++D++++V+ + Q + +DE+H + + FL +E I
Sbjct: 97 AASNNSVDDIRQLVEQVRIPPQIGKYKVYIIDEVHMLSASAFNAFLKTLEEPPRHAIFIL 156
Query: 397 TENPSFSLNNALLSRCRVVVMDKLTTEDVM 486
+ +LSRC++ ++++ ED +
Sbjct: 157 ATTEKHKILPTILSRCQIYDFNRISVEDTV 186
>UniRef50_A7I2C9 Cluster: ATP-dependent CLP protease ATP-binding
subunit; n=1; Campylobacter hominis ATCC BAA-381|Rep:
ATP-dependent CLP protease ATP-binding subunit -
Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 /
NCTC 13146 /CH001A)
Length = 729
Score = 37.9 bits (84), Expect = 0.19
Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Frame = +1
Query: 184 KKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRF---------NKL 336
K+ + + A T+ D ++ V ++ + K I+F DEIH +
Sbjct: 238 KEIYEINLTSMLAGTTYRGDFEQRVNDLIDELKNKKNVIIFFDEIHTILGAGSTGGSDAD 297
Query: 337 QQDTFLPHVENGTITLIGATT--ENPSFSLNNALLSRCRVVVMDKLTTEDVMVILK 498
D P + NG I+ IGATT E F + ALL R + + + T ED ILK
Sbjct: 298 LADALKPALANGEISCIGATTYAEFRDFGKDKALLRRFNKIDICEPTLEDSFKILK 353
>UniRef50_A5P451 Cluster: DNA-directed DNA polymerase; n=1;
Methylobacterium sp. 4-46|Rep: DNA-directed DNA
polymerase - Methylobacterium sp. 4-46
Length = 699
Score = 37.9 bits (84), Expect = 0.19
Identities = 22/96 (22%), Positives = 41/96 (42%)
Frame = +1
Query: 214 LSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDTFLPHVENGTITLIGA 393
L A+ G+ D + +V+ + K + I +DE HR D L +E T +
Sbjct: 97 LCASQGGLEDARMLVRASSASGSRKYRKIFALDEAHRMTGAAFDALLSRLEEPNSTTVFM 156
Query: 394 TTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKK 501
++ A+L+R + + ++ ED + L K
Sbjct: 157 LLTTDLEAIPEAVLTRSLRIEIRPISDEDALTYLNK 192
>UniRef50_Q8D230 Cluster: DnaX protein; n=1; Wigglesworthia
glossinidia endosymbiont of Glossina brevipalpis|Rep:
DnaX protein - Wigglesworthia glossinidia brevipalpis
Length = 365
Score = 37.1 bits (82), Expect = 0.33
Identities = 35/150 (23%), Positives = 69/150 (46%), Gaps = 7/150 (4%)
Frame = +1
Query: 181 CKKQNNLKFVKL----SATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDT 348
C++ FV L +A+ + I ++KE++ K I +DE+H +K +
Sbjct: 79 CEESEKNCFVDLIEIDAASHTKIENIKEVLDNIKYLPSKGRYKIYIIDEVHMLSKYSFNA 138
Query: 349 FLPHVEN--GTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIEYNEA 522
L +E + I ATTE + +LSRC + + +++ D++ LKK ++ +
Sbjct: 139 LLKILEEPPNHVKFILATTE--LNKIPETILSRCLHLQLKEISETDILYNLKKILKLEKI 196
Query: 523 KL-INTKETVNKSDEPNQTIPRYLIEEASL 609
+ ++KS + + L E+AS+
Sbjct: 197 YYEEEALKIISKSSQHSMRDALTLAEKASI 226
>UniRef50_Q899U1 Cluster: DNA polymerase III subunits gamma and tau;
n=12; Clostridium|Rep: DNA polymerase III subunits gamma
and tau - Clostridium tetani
Length = 552
Score = 37.1 bits (82), Expect = 0.33
Identities = 25/113 (22%), Positives = 54/113 (47%), Gaps = 6/113 (5%)
Frame = +1
Query: 178 ICKKQNNLKFVKL----SATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQD 345
ICKK N+ + + +A+ + +++++ I++ + + MDE+H + +
Sbjct: 81 ICKKINSNMLIDIEELDAASNNSVDNIRSIIEEVYYPPREAKYKVYIMDEVHMLSTGAVN 140
Query: 346 TFLPHVEN--GTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILK 498
FL +E + I ATT+ + +LSRC+ ++ +ED+ L+
Sbjct: 141 AFLKTLEEPPSNVIFILATTDPQKLPI--TILSRCQRFDFKRIKSEDIFQRLR 191
>UniRef50_Q5F3M1 Cluster: Putative uncharacterized protein; n=7;
Euteleostomi|Rep: Putative uncharacterized protein -
Gallus gallus (Chicken)
Length = 1412
Score = 36.7 bits (81), Expect = 0.43
Identities = 33/160 (20%), Positives = 70/160 (43%)
Frame = +1
Query: 85 HVASLCDESDKFQKY*YFFIPITSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKI 264
H+A + D+ ++ +F+ + N I +CK+ N + A S D+ E
Sbjct: 1007 HLARQYESQDEIKQAVHFYTRAQAFNNAI-RLCKENNLDDQLMNLALLSSPEDMIEAACY 1065
Query: 265 AKNDAQFKNQTILFMDEIHRFNKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRC 444
+ + ++ ++ + F+K + F + G + LI + S + ALL+RC
Sbjct: 1066 YEEKGEQMDRAVMLYHKAGHFSKALELAFATQ-QFGALQLIAEDLDEKS---DPALLARC 1121
Query: 445 RVVVMDKLTTEDVMVILKKAIEYNEAKLINTKETVNKSDE 564
++ E + +L A +Y+EA + K+ + ++E
Sbjct: 1122 SGFFIEHAQYEKAVELLLTAKKYHEALQLCLKQNLTITEE 1161
>UniRef50_Q601S8 Cluster: DNA polymerase III gamma-tau subunits;
n=5; Mycoplasma hyopneumoniae|Rep: DNA polymerase III
gamma-tau subunits - Mycoplasma hyopneumoniae (strain
232)
Length = 726
Score = 36.7 bits (81), Expect = 0.43
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 4/129 (3%)
Frame = +1
Query: 151 TSLANVISNICKKQNN-LKFVKLSATT-SGINDVKEIVKIAKNDAQFKNQTILFMDEIHR 324
T L N K NN L +++ A + +G+ +++EI++ + N Q I +DE+H
Sbjct: 77 TDLIEPCQNCIKNFNNSLDIIEMDAASHNGVKEIREIIENSINFPQISPYKIYILDEVHM 136
Query: 325 FNKLQQDTFLPHVENGT--ITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILK 498
+ + FL +E + I ATTE L +LSR + L +++ L+
Sbjct: 137 LSTSAFNAFLKTLEEPPKHMIFILATTEVHKIPL--TILSRVQRYNFLALKEDEICHRLE 194
Query: 499 KAIEYNEAK 525
+E + K
Sbjct: 195 FILEKEKIK 203
>UniRef50_A2A0B1 Cluster: DNA polymerase III subunit gamma/tau; n=1;
Microscilla marina ATCC 23134|Rep: DNA polymerase III
subunit gamma/tau - Microscilla marina ATCC 23134
Length = 575
Score = 36.7 bits (81), Expect = 0.43
Identities = 23/103 (22%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Frame = +1
Query: 184 KKQNNLKFVKLSATTSG-INDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDTFLPH 360
+ Q ++ +L A +S ++D++ +V + Q + + +DE+H + + FL
Sbjct: 85 QNQGSMNVYELDAASSNSVDDIRNLVDQVRYPPQSGKRKVYIIDEVHMLSNSAFNAFLKT 144
Query: 361 VENGT--ITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDV 483
+E + I ATTE + +LSRC++ ++ +D+
Sbjct: 145 LEEPPEYVIFILATTE--KHKIIPTILSRCQIFDFKRIEVKDM 185
>UniRef50_Q3LW37 Cluster: ATP binding subunit of Clp protease; n=1;
Bigelowiella natans|Rep: ATP binding subunit of Clp
protease - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 897
Score = 36.7 bits (81), Expect = 0.43
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
Frame = +1
Query: 184 KKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRF-------NKLQQ 342
K+ NL+ K+ A + D + + A+F++ ILF+DEIH L
Sbjct: 314 KRIINLELTKIVAGSKYRGDFESRILSIIEMARFEDSVILFIDEIHTIMGAGSSEGTLDA 373
Query: 343 DTFL-PHVENGTITLIGATTE---NPSFSLNNALLSRCRVVVMDKLTTEDVMVIL 495
L P + G I+LIGATTE + AL R + V + + T + + IL
Sbjct: 374 ANMLKPPLSRGEISLIGATTEEEFRKYIKADGALERRFQAVKVPEPTISEAIQIL 428
>UniRef50_Q7R7M3 Cluster: Elongation factor Tu family, putative;
n=6; Plasmodium|Rep: Elongation factor Tu family,
putative - Plasmodium yoelii yoelii
Length = 597
Score = 36.7 bits (81), Expect = 0.43
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Frame = +1
Query: 160 ANVISNICKKQNN---LKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFN 330
+N N CK QNN +K K T+ N+V ++K KN+ K+ + + ++
Sbjct: 52 SNKNDNKCKSQNNSIPVKHTKTKEKTNNKNEVNIVMKDDKNEKDEKDSKYIMLGTLNIL- 110
Query: 331 KLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSR 441
L H++ G TLIGA N ++ +N+ +L +
Sbjct: 111 ------VLGHIDAGKSTLIGALLYNLNY-VNDQMLKK 140
>UniRef50_A4CK17 Cluster: DNA polymerase III subunit gamma/tau; n=3;
Flavobacteriales|Rep: DNA polymerase III subunit
gamma/tau - Robiginitalea biformata HTCC2501
Length = 631
Score = 36.3 bits (80), Expect = 0.57
Identities = 19/98 (19%), Positives = 42/98 (42%)
Frame = +1
Query: 217 SATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDTFLPHVENGTITLIGAT 396
+A+ + ++D++ ++ + Q + +DE+H ++ + FL +E I
Sbjct: 95 AASNNSVDDIRNLIDQVRIPPQVGKYKVYIIDEVHMLSQAAFNAFLKTLEEPPRHAIFIL 154
Query: 397 TENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIE 510
+ +LSRC++ ++T D LK E
Sbjct: 155 ATTEKHKIIPTILSRCQIFDFRRITVGDAASYLKYIAE 192
>UniRef50_A5CF91 Cluster: DNA polymerase III gamma and tau chains;
n=1; Orientia tsutsugamushi Boryong|Rep: DNA polymerase
III gamma and tau chains - Orientia tsutsugamushi
(strain Boryong) (Rickettsia tsutsugamushi)
Length = 559
Score = 35.9 bits (79), Expect = 0.76
Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 2/99 (2%)
Frame = +1
Query: 217 SATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDTFLPHVEN--GTITLIG 390
+A+ +G++DV+ I+ ++ I +DE+H +K + L +E I
Sbjct: 104 AASRTGVDDVRTIIDDSEYKPLISKYKIFIIDEVHMLSKSAFNALLKLLEEPPSHTIFIF 163
Query: 391 ATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAI 507
ATTE L ++SRC+ + +L +++ IL I
Sbjct: 164 ATTEINKIPL--TVISRCQKFDLRRLDINNIVQILSNII 200
>UniRef50_Q7NRW0 Cluster: ATP-dependent Clp protease, ATP-binding
subunit; n=22; Proteobacteria|Rep: ATP-dependent Clp
protease, ATP-binding subunit - Chromobacterium
violaceum
Length = 760
Score = 35.5 bits (78), Expect = 1.0
Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 12/107 (11%)
Frame = +1
Query: 214 LSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRF--------NKLQQDTFL-PHVE 366
L A T D ++ +K ILF+DEIH L L P +
Sbjct: 258 LLAGTKYRGDFEQRLKAVIKQLTDDTNAILFIDEIHTLIGAGAASGGTLDASNLLKPALS 317
Query: 367 NGTITLIGATTENP---SFSLNNALLSRCRVVVMDKLTTEDVMVILK 498
NG++ IGATT N F +NAL R + + + + T E + ILK
Sbjct: 318 NGSLRCIGATTYNEYRGIFEKDNALSRRFQKIDVTEPTVEQTVEILK 364
>UniRef50_Q30SV7 Cluster: Diguanylate cyclase (GGDEF domain) with
PAS/PAC sensor; n=1; Thiomicrospira denitrificans ATCC
33889|Rep: Diguanylate cyclase (GGDEF domain) with
PAS/PAC sensor - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 659
Score = 35.5 bits (78), Expect = 1.0
Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
Frame = +1
Query: 127 Y*YFFIPITSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILF 306
Y +F +A++ N+ ++Q ++ +LS T + + +E+ +I D ++ +IL+
Sbjct: 216 YNHFMEKYNEIADLNKNL-EEQVAIRTEQLSKTNRLLKEAQELTRIGSWDYDLEDGSILW 274
Query: 307 MDEIHRFNKLQQDTFLPHVENGTITLIGATTENPSFS--LNNALLSRC 444
DE+ ++ D F P E TI + SF NA+ +C
Sbjct: 275 SDELFNIFEVDSDEFTPTYE--TIMNFIHPEDRQSFQEMFQNAIKQKC 320
>UniRef50_O67707 Cluster: DNA polymerase III gamma subunit; n=3;
Aquifex aeolicus|Rep: DNA polymerase III gamma subunit -
Aquifex aeolicus
Length = 473
Score = 35.5 bits (78), Expect = 1.0
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Frame = +1
Query: 217 SATTSGINDVKEIVKIAKNDAQFKNQ-TILFMDEIHRFNKLQQDTFLPHVENGTITLIGA 393
+A+ GI+DV+ + K A N K + + +DE H K + L +E +
Sbjct: 95 AASNRGIDDVRAL-KEAVNYKPIKGKYKVYIIDEAHMLTKEAFNALLKTLEEPPPRTVFV 153
Query: 394 TTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIE 510
+ +LSRC+ ++ K+ E V+ LKK E
Sbjct: 154 LCTTEYDKILPTILSRCQRIIFSKVRKEKVIEYLKKICE 192
>UniRef50_A6DEF7 Cluster: ENDOPEPTIDASE CLP ATP-BINDING CHAIN A;
n=1; Caminibacter mediatlanticus TB-2|Rep: ENDOPEPTIDASE
CLP ATP-BINDING CHAIN A - Caminibacter mediatlanticus
TB-2
Length = 730
Score = 35.5 bits (78), Expect = 1.0
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 12/117 (10%)
Frame = +1
Query: 184 KKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRF--------NKLQ 339
KK +L L A T + ++ +K N+ + +N+ ILF+DEIH +K+
Sbjct: 230 KKIYSLDMGSLVAGTKYRGEFEKRMKAILNELKKENEPILFIDEIHMIVGAGAAGDSKMD 289
Query: 340 QDTFL-PHVENGTITLIGATTENP---SFSLNNALLSRCRVVVMDKLTTEDVMVILK 498
L P + G I IGATT F + AL R + + + + + ED + IL+
Sbjct: 290 VANLLKPALAKGEIRCIGATTYEEYKNHFEKDKALNRRFQKIDIKEPSIEDTIKILE 346
>UniRef50_Q661F8 Cluster: DNA polymerase III, subunits gamma and
tau; n=7; Borrelia burgdorferi group|Rep: DNA polymerase
III, subunits gamma and tau - Borrelia garinii
Length = 560
Score = 35.1 bits (77), Expect = 1.3
Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Frame = +1
Query: 175 NICKKQNN---LKFVKLS-ATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQ 342
N CK N L +++ A+ + + D+++I + I +DE+H +
Sbjct: 78 NNCKSIENDSSLDVIEIDGASNTSVQDIRQIKEEIMFPPAISKYRIYIIDEVHMLSNSAF 137
Query: 343 DTFLPHVEN--GTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKK 501
+ L +E I I ATTE S L + SRC+ L+ E + +LKK
Sbjct: 138 NALLKTIEEPPNYIVFIFATTE--SHKLPETIKSRCQHFSFKLLSLEKIYNMLKK 190
>UniRef50_Q5FTB4 Cluster: DNA polymerase III subunit gamma/tau; n=6;
Rhodospirillales|Rep: DNA polymerase III subunit
gamma/tau - Gluconobacter oxydans (Gluconobacter
suboxydans)
Length = 652
Score = 35.1 bits (77), Expect = 1.3
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +1
Query: 217 SATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDTFLPHVEN--GTITLIG 390
+A+ +G++DV+EI++ + + +DE+H ++ + L +E +T I
Sbjct: 135 AASRTGVDDVREIIEATRFRPMQARMKVFIIDEVHMLSRNAFNALLKTLEEPPPQVTFIF 194
Query: 391 ATTENPSFSLNNALLSRCR 447
ATTE + +LSRC+
Sbjct: 195 ATTELRKVPV--TVLSRCQ 211
>UniRef50_O25419 Cluster: DNA polymerase III gamma and tau subunits;
n=4; Helicobacter|Rep: DNA polymerase III gamma and tau
subunits - Helicobacter pylori (Campylobacter pylori)
Length = 578
Score = 35.1 bits (77), Expect = 1.3
Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 2/99 (2%)
Frame = +1
Query: 220 ATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDTFLPHVEN--GTITLIGA 393
A+ GI+DV+ +++ + F I +DE+H F + L +E + + A
Sbjct: 94 ASNRGIDDVRNLIEQTRYKPSFGRYKIFIIDEVHMFTTEAFNALLKTLEEPPSHVKFLLA 153
Query: 394 TTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIE 510
TT+ + L +LSR + K+ V+ LK +E
Sbjct: 154 TTD--ALKLPATILSRTQHFRFKKIPENSVISHLKTILE 190
>UniRef50_Q1GV06 Cluster: DNA polymerase III, subunits gamma and
tau; n=6; Sphingomonadales|Rep: DNA polymerase III,
subunits gamma and tau - Sphingopyxis alaskensis
(Sphingomonas alaskensis)
Length = 565
Score = 35.1 bits (77), Expect = 1.3
Identities = 22/89 (24%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Frame = +1
Query: 217 SATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDTFLPHVENGT--ITLIG 390
+A+ +G++DV+EI++ + A I +DE+H ++ + L +E + +
Sbjct: 126 AASNTGVDDVREIIEAVRYAAVSARYKIYIIDEVHMLSRNAFNALLKTLEEPPPHVKFLF 185
Query: 391 ATTENPSFSLNNALLSRCRVVVMDKLTTE 477
ATTE + +LSRC+ + ++T +
Sbjct: 186 ATTEVNKVPV--TVLSRCQRFDLRRITPD 212
>UniRef50_Q1GKB7 Cluster: DNA polymerase III subunits gamma and tau;
n=27; Bacteria|Rep: DNA polymerase III subunits gamma
and tau - Silicibacter sp. (strain TM1040)
Length = 608
Score = 35.1 bits (77), Expect = 1.3
Identities = 24/106 (22%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Frame = +1
Query: 217 SATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDTFLPHVEN--GTITLIG 390
+A+ +G+ D++EI+ A I +DE+H + + L +E + I
Sbjct: 114 AASRTGVGDIREIIDSVAYRAASARYKIYIIDEVHMLSTSAFNALLKTLEEPPAHVKFIF 173
Query: 391 ATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIEYNEAKL 528
ATTE + +LSRC+ + ++ E ++ +L++ +A++
Sbjct: 174 ATTEIRKVPV--TVLSRCQRFDLRRIEPEVMIDLLRRIATSEQAEI 217
>UniRef50_Q057E1 Cluster: DNA polymerase III, g and t subunits; n=1;
Buchnera aphidicola str. Cc (Cinara cedri)|Rep: DNA
polymerase III, g and t subunits - Buchnera aphidicola
subsp. Cinara cedri
Length = 368
Score = 35.1 bits (77), Expect = 1.3
Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 3/132 (2%)
Frame = +1
Query: 142 IPITSLANVISNICKKQNNLKFVKLSATT-SGINDVKEIVKIAKNDAQFKNQTILFMDEI 318
IP N +S +K L F++L A + + ++D+K ++ K I +DE+
Sbjct: 71 IPCRKCKNCLS--LEKGKFLDFIELDAASKTKVDDIKIMLDTTKYAPMCGRFKIYLIDEV 128
Query: 319 HRFNKLQQDTFLPHVENGT--ITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVI 492
H +K + L +E I + ATT + ++SRC + + +T ++
Sbjct: 129 HMLSKHSFNALLKILEEPPKYIQIYIATTN--IHKIPKTIISRCLHIKLSYITLHNIYNF 186
Query: 493 LKKAIEYNEAKL 528
LKK + K+
Sbjct: 187 LKKITKKENIKI 198
>UniRef50_Q23EV8 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 302
Score = 35.1 bits (77), Expect = 1.3
Identities = 28/112 (25%), Positives = 56/112 (50%), Gaps = 2/112 (1%)
Frame = +1
Query: 277 AQFKNQTILFMDEIHRFNKLQQDTFLPHVENGT-ITLIGATTENPSFSLNNALLSRCRVV 453
AQ + Q+++ + ++ Q L EN T + + + + AL +
Sbjct: 20 AQLEEQSVIALRDVEAAKNTVQKQKLA-AENATNLQQANEVVKKTQDAKSLALEATTTAK 78
Query: 454 VMDKLTTEDVMVILKKAIEYNEAKLINTKETVNKSD-EPNQTIPRYLIEEAS 606
DK ++++ I +KAIEYNE ++ ++KE + K+D + N+ + IE+A+
Sbjct: 79 RADK-EQKNIIEISRKAIEYNEKQIKDSKEALEKADTDDNKQTQKEAIEKAN 129
>UniRef50_Q92DN5 Cluster: Lin0778 protein; n=15; Firmicutes|Rep:
Lin0778 protein - Listeria innocua
Length = 938
Score = 34.7 bits (76), Expect = 1.8
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 18/97 (18%)
Frame = +1
Query: 298 ILFMDEIHRFNKLQQDTFLPHVENGT--------------ITLIGATTENPSFSLNNALL 435
ILF+DEIHR Q+ +++GT + +IGATTENP SL +
Sbjct: 218 ILFLDEIHRLPPEGQEMIFYLMDSGTYNKLGETDRTRKSNVLIIGATTENPESSLLKTFM 277
Query: 436 SRCRVVV----MDKLTTEDVMVILKKAIEYNEAKLIN 534
R +++ +++ T + + +LK + +EA +N
Sbjct: 278 RRIPIIITLPSLEERTAFERVELLKYLLS-SEAHRVN 313
>UniRef50_Q8ZSD6 Cluster: DNA polymerase III, delta prime subunit;
n=2; Nostocaceae|Rep: DNA polymerase III, delta prime
subunit - Anabaena sp. (strain PCC 7120)
Length = 291
Score = 34.7 bits (76), Expect = 1.8
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Frame = +1
Query: 235 INDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDTFLPHVEN---GTITLIGATTEN 405
+ V+E+++ A Q ++ + E N + L +E GT LI + +
Sbjct: 94 VEQVREVIEFLSTSAVEGKQKVVIIHEADMLNPTAANKLLKTLEEPKTGTFILISSYPQK 153
Query: 406 PSFSLNNALLSRCRVVVMDKLTTEDVMVILK-KAIEYNE 519
++ SRC+++ +LT E+V+ +LK + IE E
Sbjct: 154 LLLTIK----SRCQIIPFQRLTDEEVISVLKDQQIEATE 188
>UniRef50_Q7MUS1 Cluster: DNA polymerase III, gamma and tau
subunits; n=1; Porphyromonas gingivalis|Rep: DNA
polymerase III, gamma and tau subunits - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 602
Score = 34.7 bits (76), Expect = 1.8
Identities = 22/91 (24%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Frame = +1
Query: 187 KQNNLKFVKL-SATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDTFLPHV 363
+Q ++ +L +A+ + ++D++ +++ A Q I +DE+H ++ + FL +
Sbjct: 87 EQRSMNIYELDAASNNSVDDIRLLIEQANVPPQIGKYKIYIIDEVHMLSQQAFNAFLKTL 146
Query: 364 EN--GTITLIGATTENPSFSLNNALLSRCRV 450
E + I ATTE + +LSRC++
Sbjct: 147 EEPPSYVIFILATTE--KHKILPTILSRCQI 175
>UniRef50_Q2GE93 Cluster: ATP-dependent Clp protease, ATP-binding
subunit ClpA; n=1; Neorickettsia sennetsu str.
Miyayama|Rep: ATP-dependent Clp protease, ATP-binding
subunit ClpA - Neorickettsia sennetsu (strain Miyayama)
Length = 740
Score = 34.7 bits (76), Expect = 1.8
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 14/133 (10%)
Frame = +1
Query: 199 LKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRF--------NKLQQDTFL 354
LK L A T D +E ++ N+ TILF+DEIH + L
Sbjct: 248 LKIGSLLAGTRYRGDFEERIRTVMNEISSSKNTILFIDEIHTIVGAGSTSNGSIDAGNLL 307
Query: 355 -PHVENGTITLIGATT---ENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIEYNE- 519
P + G + IGATT + F + AL R + + +++ + D + I+ Y E
Sbjct: 308 KPFLTKGPLRCIGATTYREYSTHFEKDAALDRRFQRIEIEEPSISDTLNIIDGTKSYYED 367
Query: 520 -AKLINTKETVNK 555
++ TK ++N+
Sbjct: 368 FHRVHYTKASLNE 380
>UniRef50_A6EHG2 Cluster: DNA polymerase III, tau and gamma
subunits; n=1; Pedobacter sp. BAL39|Rep: DNA polymerase
III, tau and gamma subunits - Pedobacter sp. BAL39
Length = 624
Score = 34.7 bits (76), Expect = 1.8
Identities = 20/101 (19%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Frame = +1
Query: 217 SATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDTFLPHVENGTITLIGAT 396
+A+ + ++D++ ++ + Q I +DE+H + + FL +E I
Sbjct: 97 AASNNSVDDIRSLIDQVRIPPQAGKYKIYIIDEVHMLSANAFNAFLKTLEEPPSYAIFIL 156
Query: 397 TENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKK-AIEYN 516
+ +LSRC++ +++ +D+ L + AI N
Sbjct: 157 ATTEKHKILPTILSRCQIFDFNRIQVDDISSHLNRIAIREN 197
>UniRef50_A5V2B2 Cluster: DNA polymerase III, subunits gamma and
tau; n=1; Sphingomonas wittichii RW1|Rep: DNA polymerase
III, subunits gamma and tau - Sphingomonas wittichii RW1
Length = 582
Score = 34.7 bits (76), Expect = 1.8
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Frame = +1
Query: 217 SATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDTFLPHVEN--GTITLIG 390
+A+ + I+DV+EI++ + + I +DE+H +K + L +E + +
Sbjct: 105 AASHTSIDDVREIIEAVRYASVSARYKIYIIDEVHMLSKSAFNGLLKTLEEPPAHVKFLF 164
Query: 391 ATTENPSFSLNNALLSRC-----RVVVMDKLTTEDVMVILKKAIE 510
ATTE + +LSRC R + DKL V+ + +E
Sbjct: 165 ATTEVNKVPI--TVLSRCQRFDLRRITADKLAAHFTNVVAAEGVE 207
>UniRef50_Q8IM28 Cluster: ATP-dependent Clp protease, putative; n=3;
Plasmodium|Rep: ATP-dependent Clp protease, putative -
Plasmodium falciparum (isolate 3D7)
Length = 1341
Score = 34.7 bits (76), Expect = 1.8
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 11/123 (8%)
Frame = +1
Query: 199 LKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRF-------NKLQQDTFL- 354
L + A T + +E +K ++ K + ILF+DEIH L L
Sbjct: 585 LNLGNIVAGTKYRGEFEEKMKHLLSNMNKKKKNILFIDEIHVIVGAGSGEGSLDASNLLK 644
Query: 355 PHVENGTITLIGATT--ENPSFSLNN-ALLSRCRVVVMDKLTTEDVMVILKKAIEYNEAK 525
P + + + IG TT E F N+ AL R V ++ T+++ +LKK I+YN K
Sbjct: 645 PFLSSDNLQCIGTTTFQEYSKFIENDKALRRRFNCVTINPFTSKETYKLLKK-IKYNYEK 703
Query: 526 LIN 534
N
Sbjct: 704 YHN 706
>UniRef50_Q23RX6 Cluster: Myb-like DNA-binding domain containing
protein; n=4; Eukaryota|Rep: Myb-like DNA-binding domain
containing protein - Tetrahymena thermophila SB210
Length = 1307
Score = 34.7 bits (76), Expect = 1.8
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Frame = +1
Query: 169 ISNICKKQNNLKFVKLSATTSGINDVKEIV-KIAKNDAQFKN---QTILFMDEIHRFNKL 336
I+N NN K + SA S DVKEI+ +I N +F+N Q I + DE ++ + L
Sbjct: 702 INNNKSSNNNFKNIPNSAAAS-TADVKEIIQRIPHNIKEFENFRKQIIQYSDEYYQHHHL 760
Query: 337 QQDTFLPHVENGTITLIGA 393
Q T P+ + ++ L+ A
Sbjct: 761 LQQT--PNDKESSLNLLSA 777
>UniRef50_Q8KUM7 Cluster: S-layer protein; n=1; Clostridium
difficile|Rep: S-layer protein - Clostridium difficile
Length = 355
Score = 34.3 bits (75), Expect = 2.3
Identities = 30/121 (24%), Positives = 57/121 (47%)
Frame = +1
Query: 190 QNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDTFLPHVEN 369
Q++L VKL + N + + K+A +D +T+ D++ L + + ++N
Sbjct: 167 QDSLSSVKLGEVKASANTYETVTKVAFDDKNTLTKTVSVGDKL---LDLSKPLVIKEIKN 223
Query: 370 GTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIEYNEAKLINTKETV 549
G TLI EN + S +++ ++ +VV + T + K A + N+ K +T E
Sbjct: 224 G--TLIIDLPENTTSSSSDSSIN-LKVVNAKEQTIDLDASSYKSAEDINQLKAFDTNEVK 280
Query: 550 N 552
N
Sbjct: 281 N 281
>UniRef50_Q4VK18 Cluster: CysG; n=15; Proteobacteria|Rep: CysG -
Xylella fastidiosa
Length = 390
Score = 34.3 bits (75), Expect = 2.3
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +1
Query: 355 PHVENGTITLIGATTENPSFSLNNAL--LSRCRVVVMDKLTTEDVMVILKKAIEYNEAKL 528
P E+G++TL+GA + NAL L+ +++ D+L ++ V+ + ++ E E
Sbjct: 180 PPTESGSVTLVGAGAGDAGLLTLNALRALNEADIILYDRLVSDTVLQMARRDAEQIEVGK 239
Query: 529 INTKETVNKSD 561
T +V + D
Sbjct: 240 SATGHSVRQED 250
>UniRef50_Q03HM3 Cluster: Transcriptional regulator containing an
AAA-type ATPase domain and a DNA-binding domain; n=1;
Pediococcus pentosaceus ATCC 25745|Rep: Transcriptional
regulator containing an AAA-type ATPase domain and a
DNA-binding domain - Pediococcus pentosaceus (strain
ATCC 25745 / 183-1w)
Length = 913
Score = 34.3 bits (75), Expect = 2.3
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 298 ILFMDEIHRFNKLQQDTFLPHVENGTITLIGAT 396
+LF+DEIHR + Q+ +++NG IT +G T
Sbjct: 209 MLFLDEIHRLDAKGQEKLFNYLDNGKITPLGET 241
>UniRef50_A6M341 Cluster: Sigma-54 factor, interaction
domain-containing protein; n=2; Clostridium beijerinckii
NCIMB 8052|Rep: Sigma-54 factor, interaction
domain-containing protein - Clostridium beijerinckii
NCIMB 8052
Length = 932
Score = 34.3 bits (75), Expect = 2.3
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 14/68 (20%)
Frame = +1
Query: 298 ILFMDEIHRFNKLQQDTFLPHVENGT--------------ITLIGATTENPSFSLNNALL 435
ILF+DEIHR Q+ ++ GT + LIGATTE+P+ +L N +
Sbjct: 218 ILFLDEIHRLPPEGQEMIFYFMDTGTYNKLGETDRQRKANVLLIGATTEDPNSTLLNTFI 277
Query: 436 SRCRVVVM 459
R + ++
Sbjct: 278 RRIPITIV 285
>UniRef50_A4XJ39 Cluster: DNA polymerase III, subunits gamma and
tau; n=1; Caldicellulosiruptor saccharolyticus DSM
8903|Rep: DNA polymerase III, subunits gamma and tau -
Caldicellulosiruptor saccharolyticus (strain ATCC 43494
/ DSM 8903)
Length = 535
Score = 34.3 bits (75), Expect = 2.3
Identities = 19/104 (18%), Positives = 45/104 (43%)
Frame = +1
Query: 217 SATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDTFLPHVENGTITLIGAT 396
+A+ + +NDV++I + + + +DE+H + + L +E +
Sbjct: 94 AASNTSVNDVRQIRDEVRYPPSMCKRRVYIIDEVHMLSTGAFNALLKTLEEPPAHALFIL 153
Query: 397 TENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIEYNEAKL 528
+ +LSRC+ +++ +D+ LKK +E + +
Sbjct: 154 ATTDIQKVPATILSRCQRFDFKRISVKDIYERLKKVVELEKISI 197
>UniRef50_A4XIS4 Cluster: Transcription-repair coupling factor; n=1;
Caldicellulosiruptor saccharolyticus DSM 8903|Rep:
Transcription-repair coupling factor -
Caldicellulosiruptor saccharolyticus (strain ATCC 43494 /
DSM 8903)
Length = 1143
Score = 34.3 bits (75), Expect = 2.3
Identities = 38/137 (27%), Positives = 65/137 (47%)
Frame = +1
Query: 145 PITSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHR 324
PIT V+S + + K +K + I+ + ++ ND +FK+ +L +DE H+
Sbjct: 682 PIT--IEVLSRLKSESQQKKILK-ALKDGTIDIIIGTHRLLSNDVKFKDLGLLIIDEEHK 738
Query: 325 FNKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKA 504
F ++ EN + + A T P +LN ALL + +++ ED +
Sbjct: 739 FGVEHKEKIKKLKENVDVLTLTA-TPIPR-TLNMALLGIRDLSIIED-PPEDRFPVQTFV 795
Query: 505 IEYNEAKLINTKETVNK 555
+EYNE K+I KE + K
Sbjct: 796 MEYNE-KVI--KEAILK 809
>UniRef50_Q8IHX0 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 629
Score = 34.3 bits (75), Expect = 2.3
Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 1/137 (0%)
Frame = +1
Query: 181 CKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDTFLPH 360
CK + N+ FVK + + I+KI N + N T IH N + DT
Sbjct: 334 CKYKKNMSFVKNNMLRKNTMKKQNIIKI--NKLKMTNST---FPNIHLTNTQENDTIKFF 388
Query: 361 VENGTITLIGATTENPSFSLNNALLSRCRVVVMDKL-TTEDVMVILKKAIEYNEAKLINT 537
+ I + E+ + +N +++ R + DKL ++ +KK ++ AK NT
Sbjct: 389 SQKN----IEKSNESLKY-INKSIIGRSSICSYDKLENLKNNFTEIKKNVK--NAKR-NT 440
Query: 538 KETVNKSDEPNQTIPRY 588
T++K E + TI +Y
Sbjct: 441 YNTIHKKLENSSTINKY 457
>UniRef50_O77314 Cluster: Putative uncharacterized protein MAL3P1.11;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein MAL3P1.11 - Plasmodium falciparum
(isolate 3D7)
Length = 1441
Score = 34.3 bits (75), Expect = 2.3
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Frame = +1
Query: 94 SLCDESDKFQKY*YFFIPITSLANVISNICKKQNNLKFVKLSATTSGINDVKE--IVKIA 267
S CD+S+ F + YFF I L N SN KK N T+S IN++ E I I
Sbjct: 1273 SECDDSEDFIAFKYFFNNIICLCNDNSNTVKKDN---------TSSNINEMNEEIIYHID 1323
Query: 268 KNDA--QFKN-QTILFMDEIHRFN 330
K D F+N +I+ M+++ + N
Sbjct: 1324 KLDINNNFENVNSIIKMEDLKKNN 1347
>UniRef50_Q5AMW9 Cluster: Putative uncharacterized protein; n=2;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 1846
Score = 34.3 bits (75), Expect = 2.3
Identities = 29/145 (20%), Positives = 64/145 (44%), Gaps = 3/145 (2%)
Frame = +1
Query: 175 NICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQF-KNQTILFMDEIHRFNKLQQ-DT 348
++ K L +LS + ++D +E + + + +F + QT F ++ +K QQ
Sbjct: 841 SVSSKSTELAETRLSISQKSLSDCREELASVRKEIEFWREQTSKFESQL--VSKTQQLHE 898
Query: 349 FLPHVENGTITLIGATTENP-SFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIEYNEAK 525
F + +T++ E S+N L S+ + DK+ + ++ L+ ++ E
Sbjct: 899 FEETLSQNKVTIVSLQREKEFQTSINTTLESKIEALKNDKIKLNEFVLNLQSMLKDREES 958
Query: 526 LINTKETVNKSDEPNQTIPRYLIEE 600
+ ++ S E Q + + L E+
Sbjct: 959 ARDISGKLSASIENYQNLQQKLSEK 983
>UniRef50_O83779 Cluster: ATP-dependent Clp protease subunit A; n=1;
Treponema pallidum|Rep: ATP-dependent Clp protease
subunit A - Treponema pallidum
Length = 809
Score = 33.9 bits (74), Expect = 3.1
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 12/113 (10%)
Frame = +1
Query: 196 NLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRF--------NKLQQDTF 351
+L L A T D +E +K + + K Q ILF+DEIH L
Sbjct: 288 SLDMTSLLAGTKFRGDFEERLKRLAEELEKKTQAILFIDEIHTVVGTGSGGSGGLDASNL 347
Query: 352 L-PHVENGTITLIGATT---ENPSFSLNNALLSRCRVVVMDKLTTEDVMVILK 498
L P + +G I IG+TT F + AL R + + +++ + E+ + IL+
Sbjct: 348 LKPLLSSGKIRCIGSTTYEEYTKHFRKDQALARRFQKIDIEEPSEEETLRILE 400
>UniRef50_Q1EXM9 Cluster: Putative uncharacterized protein; n=1;
Clostridium oremlandii OhILAs|Rep: Putative
uncharacterized protein - Clostridium oremlandii OhILAs
Length = 297
Score = 33.9 bits (74), Expect = 3.1
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = -2
Query: 386 IRVIVPFSTWGRKVSC*SLLNLWISSMNKIVWFLNCASFFAILTISFTSLMPDVVADSFT 207
IR+ +P+S W + C LL L + M + + F+ A F I + LM ++AD F+
Sbjct: 63 IRIYIPYSVWSHLLICSLLLFLGTAYMKQYINFI-VAFIFGIGLSTMPFLMLQIIADIFS 121
>UniRef50_A6M2G4 Cluster: Sigma-54 factor, interaction
domain-containing protein; n=1; Clostridium beijerinckii
NCIMB 8052|Rep: Sigma-54 factor, interaction
domain-containing protein - Clostridium beijerinckii
NCIMB 8052
Length = 895
Score = 33.9 bits (74), Expect = 3.1
Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 1/106 (0%)
Frame = +1
Query: 289 NQTILFMDEIHRFNKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKL 468
N ILF+DE+HR Q+ F ++ G +G T S S V++
Sbjct: 181 NGGILFLDEVHRLPAEGQEMFFTFMDRGVYRRLGETESERSAS-----------VLIITA 229
Query: 469 TTEDVMVILKKAIEYNEAKLINTKETVNKS-DEPNQTIPRYLIEEA 603
TTED L K +I N+ +E I +++IEE+
Sbjct: 230 TTEDPNTTLLKTFTRRIPMVITIPSLKNRGMEERFNLIKQFMIEES 275
>UniRef50_Q384I2 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 892
Score = 33.9 bits (74), Expect = 3.1
Identities = 18/67 (26%), Positives = 33/67 (49%)
Frame = +1
Query: 364 ENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIEYNEAKLINTKE 543
E+ + L+ T FS+ NA+ R ++ ++ E M ++K IE ++ N KE
Sbjct: 764 ESADVVLLTHETTAFLFSIVNAITEREAILAAERTKAESTMKNIQKKIERQKSVFANVKE 823
Query: 544 TVNKSDE 564
+ +S E
Sbjct: 824 QLEESQE 830
>UniRef50_P75177 Cluster: DNA polymerase III subunit gamma/tau; n=1;
Mycoplasma pneumoniae|Rep: DNA polymerase III subunit
gamma/tau - Mycoplasma pneumoniae
Length = 681
Score = 33.9 bits (74), Expect = 3.1
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Frame = +1
Query: 217 SATTSGINDVKEIVKIAKN-DAQFKNQTILFMDEIHRFNKLQQDTFLPHVENGT--ITLI 387
+A+ +GIND++E+ + N +FK + + +DE H L +E + I
Sbjct: 93 AASKNGINDIRELAENVFNLPFKFKKK-VYILDEAHMLTPQSWSGLLKTLEEAPDYVLFI 151
Query: 388 GATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIEYNEAKLINTKETVNKSD 561
ATTE + +LSRC+ ++T + + L + + E+ I T V +D
Sbjct: 152 FATTEFNKIPI--TILSRCQSFFFKQITNDLIQQRLAE-VAAKESIKITTDALVKLAD 206
>UniRef50_Q6MRF3 Cluster: Aspartokinase III, lysine sensitive; n=1;
Bdellovibrio bacteriovorus|Rep: Aspartokinase III,
lysine sensitive - Bdellovibrio bacteriovorus
Length = 460
Score = 33.5 bits (73), Expect = 4.0
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 11/136 (8%)
Frame = +1
Query: 208 VKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDTFLPHVENGTITLI 387
V +SAT+ ND+ + K A++ A +++ IL + + NK+ QD LP + L
Sbjct: 35 VVVSATSGTTNDLIALGKTAESQAWSESEKILSKIQ-DKHNKIAQDLKLP--ADAKAKLE 91
Query: 388 GATTENPSFSLNNALLSRCRVVVMDKLT-----------TEDVMVILKKAIEYNEAKLIN 534
E S + LL C V MD L TE + +LKK A+L++
Sbjct: 92 TLFEEMSSLAKGMHLLKDCSVKAMDTLMSLGERMSSVLFTEAMSQVLKKHGSAKSAELLD 151
Query: 535 TKETVNKSDEPNQTIP 582
+ + D+ + P
Sbjct: 152 VRTVLRTDDQFGKAKP 167
>UniRef50_Q18XU0 Cluster: Putative uncharacterized protein; n=3;
Clostridiales|Rep: Putative uncharacterized protein -
Desulfitobacterium hafniense (strain DCB-2)
Length = 430
Score = 33.5 bits (73), Expect = 4.0
Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 4/126 (3%)
Frame = +1
Query: 157 LANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILF-MDEIHRFNK 333
+ VI+ +C+ + LS T D++ VK+A + F +F D +
Sbjct: 93 ILEVIAEVCQAEKQQIKTYLSET-----DIE--VKLADSQIIFDIMITMFHQDSYVKLRI 145
Query: 334 LQQDTFLPHVE-NGTITL-IGATTENPSFSLNNALLSRCRVVVM-DKLTTEDVMVILKKA 504
T + H+E NG I G S + LLS +++ D + EDV +L K
Sbjct: 146 ADYHTHIVHIEKNGEIIFGTGDLDAGISSLTDRKLLSVSKIIEFADSVRIEDVKELLDKQ 205
Query: 505 IEYNEA 522
IEYN A
Sbjct: 206 IEYNSA 211
>UniRef50_A5CE79 Cluster: Putative uncharacterized protein; n=1;
Orientia tsutsugamushi Boryong|Rep: Putative
uncharacterized protein - Orientia tsutsugamushi (strain
Boryong) (Rickettsia tsutsugamushi)
Length = 252
Score = 33.5 bits (73), Expect = 4.0
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Frame = +1
Query: 139 FIPITSLANVISN---ICKKQNNLKFVKLSATTSGINDVKEIV 258
+IP+T L N++SN I K NLK + + TSGIND +V
Sbjct: 82 YIPMTVLHNLVSNKDAIIKDDQNLKLIFPANFTSGINDNNIVV 124
>UniRef50_A2SSR6 Cluster: Helicase domain protein; n=3; cellular
organisms|Rep: Helicase domain protein -
Methanocorpusculum labreanum (strain ATCC 43576 / DSM
4855 / Z)
Length = 1065
Score = 33.5 bits (73), Expect = 4.0
Identities = 40/169 (23%), Positives = 72/169 (42%), Gaps = 5/169 (2%)
Frame = +1
Query: 103 DESDKFQKY*YFFIPITSLANVISNICKKQNNLKFVKLSAT--TSGINDVKEIVKIAKND 276
DES F+ +T ++++I KK N K + LSAT + + D++ + I +D
Sbjct: 361 DESHNFRNRTDSKDHVTRYQKLLTDIIKKGGNTKVLLLSATPVNNSLVDLRNQISIITSD 420
Query: 277 AQF--KNQTILFMDEI-HRFNKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCR 447
F +N I + ++ + + D N T+ L +E L +SR R
Sbjct: 421 RDFAYENGGIPSISQVLIKAQREINDWSRSSKRNKTVLLDSLPSEFYKL-LEMVTISRSR 479
Query: 448 VVVMDKLTTEDVMVILKKAIEYNEAKLINTKETVNKSDEPNQTIPRYLI 594
+ +E++ + KK I I++ V K DE N+ + L+
Sbjct: 480 KHITSCYGSENLAMFPKKCIPLTFRPGIDSDGMVMKFDEVNEELETLLL 528
>UniRef50_Q9PCH3 Cluster: DNA polymerase III subunit; n=12;
Xanthomonadaceae|Rep: DNA polymerase III subunit -
Xylella fastidiosa
Length = 608
Score = 33.1 bits (72), Expect = 5.3
Identities = 24/99 (24%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Frame = +1
Query: 217 SATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDTFLPHVENGT--ITLIG 390
+A+ +G++DV+E+++ A+ + +DE+H +K + L +E + +
Sbjct: 95 AASNTGVDDVREMIENAQYMPSRGKFKVYLIDEVHMLSKAAFNALLKTLEEPPPHVKFLL 154
Query: 391 ATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAI 507
ATT+ P L +LSRC + +L E + + K +
Sbjct: 155 ATTD-PQ-KLPVTVLSRCLQFNLKRLDEEQIQRQIAKIL 191
>UniRef50_Q98RG0 Cluster: DNA POLYMERASE III SUBUNIT GAMMA AND TAU;
n=1; Mycoplasma pulmonis|Rep: DNA POLYMERASE III SUBUNIT
GAMMA AND TAU - Mycoplasma pulmonis
Length = 836
Score = 33.1 bits (72), Expect = 5.3
Identities = 27/120 (22%), Positives = 58/120 (48%), Gaps = 8/120 (6%)
Frame = +1
Query: 196 NLKFVKL-SATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDTFLPHVENG 372
N+ +++ +A+ + ++DV+ + + K+ I +DE+H F K + L +E
Sbjct: 105 NIDIIEMDAASNNSVDDVRRLNEELKSLPLKGEYRIYIIDEVHMFTKSAFNALLKSLEEP 164
Query: 373 T--ITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVM-----VILKKAIEYNEAKLI 531
+ I ATTE S + N +LSR + +++ + ++ ++ K+ I Y L+
Sbjct: 165 PKHVIFIFATTE--SHKIPNTILSRVQRFNFRRISNDVIIGHLANILEKEKINYEPKSLV 222
>UniRef50_Q97M18 Cluster: Possible transcriptional regulator of
levanase operon, AAA-ATPase domain (NtrC family), fused
to 2 BglG-like domains, ortholog of B.subtilis levR;
n=2; Clostridium|Rep: Possible transcriptional regulator
of levanase operon, AAA-ATPase domain (NtrC family),
fused to 2 BglG-like domains, ortholog of B.subtilis
levR - Clostridium acetobutylicum
Length = 896
Score = 33.1 bits (72), Expect = 5.3
Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 17/105 (16%)
Frame = +1
Query: 289 NQTILFMDEIHRFNKLQQDTFLPHVENG-------------TITLIGATTENPSFSLNNA 429
N ILF+DE+HR Q+ ++ G + +I ATTENP+ SL
Sbjct: 179 NGGILFLDEVHRLPPEGQEALFTFLDKGIFRRMGDDKSRSSNVLIISATTENPNSSLLKT 238
Query: 430 LLSRCRVVV----MDKLTTEDVMVILKKAIEYNEAKLINTKETVN 552
R +++ + + T E+ + ++K + +E+K +N +V+
Sbjct: 239 FTRRIPMLITIPSLSERTLEERLYLVKTFFK-DESKKLNRDISVS 282
>UniRef50_Q8RDI6 Cluster: DNA polymerase III, gamma/tau subunits;
n=3; Thermoanaerobacter|Rep: DNA polymerase III,
gamma/tau subunits - Thermoanaerobacter tengcongensis
Length = 518
Score = 33.1 bits (72), Expect = 5.3
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = +1
Query: 217 SATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDTFLPHVENGT--ITLIG 390
+A+ + +NDV+E+ + + +DE+H + + L +E + I
Sbjct: 94 AASNNSVNDVRELRESVIYSPSLTKYKVYIIDEVHMLSTGAFNALLKTLEEPPRHVIFIL 153
Query: 391 ATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKK 501
ATTE P L + +LSRC+ K+ T+ + L++
Sbjct: 154 ATTE-PE-KLPDTILSRCQRFDFKKIPTKQIAQNLER 188
>UniRef50_Q82Z59 Cluster: ATP-dependent helicase, DEAH-box family,
putative; n=1; Enterococcus faecalis|Rep: ATP-dependent
helicase, DEAH-box family, putative - Enterococcus
faecalis (Streptococcus faecalis)
Length = 403
Score = 33.1 bits (72), Expect = 5.3
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 14/70 (20%)
Frame = +1
Query: 289 NQTILFMDEIHRFNKLQQDTFLPHVENGTITLIG--------------ATTENPSFSLNN 426
N ++LF+DE+HR + Q+ ++ GT IG ATTENP L
Sbjct: 176 NNSVLFLDEVHRLSNENQEKLFQFMDTGTFRPIGEEGKMVHSKVRLLFATTENPKKVLLP 235
Query: 427 ALLSRCRVVV 456
R V+V
Sbjct: 236 TFYRRISVIV 245
>UniRef50_Q9VC35 Cluster: CG5807-PA; n=9; Endopterygota|Rep:
CG5807-PA - Drosophila melanogaster (Fruit fly)
Length = 527
Score = 33.1 bits (72), Expect = 5.3
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -2
Query: 224 VADSFTNFKLFCFLQILEMTFANDVMGIKKYQYFWNLSLSS 102
V ++FT F L + ++ + V GI+K Q+FW L+L S
Sbjct: 154 VYETFTVFMLMAIIVLVLTAVLSAVFGIEKLQFFWFLNLGS 194
>UniRef50_Q7RDQ7 Cluster: ClpB protein; n=8; Plasmodium|Rep: ClpB
protein - Plasmodium yoelii yoelii
Length = 909
Score = 33.1 bits (72), Expect = 5.3
Identities = 31/80 (38%), Positives = 40/80 (50%), Gaps = 12/80 (15%)
Frame = +1
Query: 196 NLKFVKLSATTSGI----NDVKEIVKIAKNDAQFKNQTILFMDEIHRF---NKLQ----- 339
+L F K +A TS N +K I+K KN KN+ ILF+DEIH K +
Sbjct: 271 SLNFRKFTAGTSYRGEFENRMKNIIKELKNK---KNKIILFVDEIHLLLGAGKAEGGVDA 327
Query: 340 QDTFLPHVENGTITLIGATT 399
+ P + G I LIGATT
Sbjct: 328 ANLLKPVLSKGEIKLIGATT 347
>UniRef50_Q54PY2 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 431
Score = 33.1 bits (72), Expect = 5.3
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Frame = +1
Query: 148 ITSLANVISNICKKQNNLKFVKLSATT---SGINDVKEIVKIAKNDA-QFKN--QTILFM 309
I + N I NI ++N+ + ++ S +G D+ +++ IA ++ QF N +T+
Sbjct: 134 IKDIYNPIINIINEKNDKECLENSVINYQITGFLDMNKVIVIADSEIIQFVNLNKTLQLN 193
Query: 310 DEIHRFNKLQQDTFLPHVENGTITLIG 390
D + F+KL QD ++ + I IG
Sbjct: 194 DTMTYFDKLSQDYYIASLSTNEILRIG 220
>UniRef50_Q9X151 Cluster: ABC transporter, ATP-binding protein; n=3;
Thermotoga|Rep: ABC transporter, ATP-binding protein -
Thermotoga maritima
Length = 571
Score = 32.7 bits (71), Expect = 7.1
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 14/115 (12%)
Frame = +1
Query: 247 KEIVKIAKNDAQF----KNQTILFMD----EIHRFNKLQQDTFLPHVENGTITLIG---- 390
+ IV + ND F KN LF D EI K+ + F+ +ENG T++G
Sbjct: 411 RNIVLVRSNDILFDTTIKNNITLFEDFPEDEIENVLKMCECDFVKELENGIDTVVGERGT 470
Query: 391 --ATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIEYNEAKLINTKETV 549
+ + L AL+ + +V+++D++T+ +K +E K++N ETV
Sbjct: 471 RLSDGQRQRIVLARALIRKPQVLILDEVTSGVDSETEEKILE----KILNEIETV 521
>UniRef50_Q6F0D9 Cluster: DNA polymerase III gamma and tau subunits;
n=1; Mesoplasma florum|Rep: DNA polymerase III gamma and
tau subunits - Mesoplasma florum (Acholeplasma florum)
Length = 631
Score = 32.7 bits (71), Expect = 7.1
Identities = 20/101 (19%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Frame = +1
Query: 187 KQNNLKFVKL-SATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDTFLPHV 363
+Q N +++ +A+ +G+++++EI + I +DE+H K + L +
Sbjct: 85 EQRNPDIIEMDAASNNGVDEIREIKNNINSLPFIGKYKIYIIDEVHMLTKAAFNALLKTL 144
Query: 364 ENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVM 486
E + I + +LSRC++ K+ +M
Sbjct: 145 EEPPVHAIFILATTEYAKIPATILSRCQIFNFKKIDRISLM 185
>UniRef50_Q67PY3 Cluster: NifA family transcriptional regulator;
n=1; Symbiobacterium thermophilum|Rep: NifA family
transcriptional regulator - Symbiobacterium thermophilum
Length = 916
Score = 32.7 bits (71), Expect = 7.1
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 13/66 (19%)
Frame = +1
Query: 298 ILFMDEIHRFNKLQQDTFLPHVENG-------------TITLIGATTENPSFSLNNALLS 438
+LF+DEIHR Q+ ++ G ++ L+GAT+E+PS SL N +
Sbjct: 212 LLFLDEIHRLPPDGQEMLFLLMDRGVYRALGDTATRQASVMLVGATSEDPSSSLLNTFVR 271
Query: 439 RCRVVV 456
R VV+
Sbjct: 272 RFPVVI 277
>UniRef50_Q3J800 Cluster: DNA-directed DNA polymerase; n=1;
Nitrosococcus oceani ATCC 19707|Rep: DNA-directed DNA
polymerase - Nitrosococcus oceani (strain ATCC 19707 /
NCIMB 11848)
Length = 529
Score = 32.7 bits (71), Expect = 7.1
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Frame = +1
Query: 217 SATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDTFLPHVENGT--ITLIG 390
+A+ +G++D +E+++ + + +DE+H F+ + L +E I +
Sbjct: 95 AASRTGVDDTRELLENVHYAPSRGHYKVYLIDEVHMFSTSSFNALLKTLEEPPPHIKFLL 154
Query: 391 ATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILKKAIEYNE 519
ATTE P L +LSRC + ++T + + L +E E
Sbjct: 155 ATTE-PK-KLPVTVLSRCLQFNLRRITPKAIAEHLNSILEAEE 195
>UniRef50_Q2STA6 Cluster: DNA polymerase III gamma-tau subunits;
n=2; Mycoplasma|Rep: DNA polymerase III gamma-tau
subunits - Mycoplasma capricolum subsp. capricolum
(strain California kid / ATCC27343 / NCTC 10154)
Length = 669
Score = 32.7 bits (71), Expect = 7.1
Identities = 20/102 (19%), Positives = 42/102 (41%), Gaps = 4/102 (3%)
Frame = +1
Query: 175 NICKKQNNLKFVKL----SATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQ 342
N CK N + + + +A+ +G+++++EI + +DE+H K
Sbjct: 79 NNCKLANENQLIDIIEIDAASNNGVDEIREIKNSVSTLPINSKYKVYIIDEVHMLTKQAF 138
Query: 343 DTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKL 468
+ L +E + I + +LSRC++ K+
Sbjct: 139 NALLKTLEEPPVYTIFILATTEFNKIPQTILSRCQIFNFTKI 180
>UniRef50_Q0P9E6 Cluster: ATP-dependent Clp protease ATP-binding
subunit; n=11; Campylobacter|Rep: ATP-dependent Clp
protease ATP-binding subunit - Campylobacter jejuni
Length = 709
Score = 32.7 bits (71), Expect = 7.1
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 12/113 (10%)
Frame = +1
Query: 196 NLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRF------NKLQQD---T 348
+L + A T D ++ +K ++ + ILF+DEIH + D
Sbjct: 219 SLDMASILAGTKYRGDFEKRIKEILSELEKIPNAILFIDEIHTIVGAGSTGESHTDFSNL 278
Query: 349 FLPHVENGTITLIGATT---ENPSFSLNNALLSRCRVVVMDKLTTEDVMVILK 498
P + NGT+ IGATT +F N L R + +D+ + E+ + ILK
Sbjct: 279 LKPALSNGTLKCIGATTFMEYKNTFDKNKPLSRRFAKINVDEPSQEESLQILK 331
>UniRef50_A6LS08 Cluster: Sigma-54 factor, interaction
domain-containing protein; n=2; Firmicutes|Rep: Sigma-54
factor, interaction domain-containing protein -
Clostridium beijerinckii NCIMB 8052
Length = 924
Score = 32.7 bits (71), Expect = 7.1
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 18/103 (17%)
Frame = +1
Query: 298 ILFMDEIHRFNKLQQDTFLPHVENG--------------TITLIGATTENPSFSLNNALL 435
ILF+DE+HR N+ Q+ ++ G + L+ ATTE+ S + L
Sbjct: 210 ILFLDEVHRLNEEGQEKLFTFMDQGVFRRMGESSGWHKANVRLVFATTESLSENFLRTFL 269
Query: 436 SRCRVVV----MDKLTTEDVMVILKKAIEYNEAKLINTKETVN 552
R + V +DK T++ + + + + EAK++N K +++
Sbjct: 270 RRIPISVSIPDLDKRGTDEKLQFIYQFL-IKEAKILNKKISIS 311
>UniRef50_A3JQW8 Cluster: DNA polymerase III subunits gamma and tau;
n=1; Rhodobacterales bacterium HTCC2150|Rep: DNA
polymerase III subunits gamma and tau - Rhodobacterales
bacterium HTCC2150
Length = 596
Score = 32.7 bits (71), Expect = 7.1
Identities = 22/96 (22%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Frame = +1
Query: 217 SATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDTFLPHVENGT--ITLIG 390
+A+ +G+ D++EI++ A I +DE+H + + L +E + +
Sbjct: 106 AASRTGVGDIREIIESVHYRAASARYKIYIIDEVHMLSNSAFNALLKTLEEPPEHVKFVF 165
Query: 391 ATTENPSFSLNNALLSRCRVVVMDKLTTEDVMVILK 498
ATTE + +LSRC+ + ++ E ++ +L+
Sbjct: 166 ATTEIRKVPV--TVLSRCQRFDLRRIEPEVMIKMLQ 199
>UniRef50_A3CKB2 Cluster: ATPase with chaperone activity,
ATP-binding subunit, putative; n=1; Streptococcus
sanguinis SK36|Rep: ATPase with chaperone activity,
ATP-binding subunit, putative - Streptococcus sanguinis
(strain SK36)
Length = 638
Score = 32.7 bits (71), Expect = 7.1
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 11/111 (9%)
Frame = +1
Query: 196 NLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQD--------TF 351
+L+ +S+ + G + V + +I + K + ILF+DE+H D
Sbjct: 119 SLELSNISSKSDGEDMVSRLKRIIEELKVTKGENILFIDEVHTIVGAGGDGSMLDAGNVI 178
Query: 352 LPHVENGTITLIGATT---ENPSFSLNNALLSRCRVVVMDKLTTEDVMVIL 495
P + G I +I ATT S + AL R ++V +++ T + + IL
Sbjct: 179 KPPLARGEIQMISATTYEEYQSSIETDKALERRVQMVPVEEPTEDQAIFIL 229
>UniRef50_A2FWY2 Cluster: Putative uncharacterized protein; n=2;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1357
Score = 32.7 bits (71), Expect = 7.1
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 148 ITSLANVISN-ICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEI 318
I S+ N S+ + KKQN ++ ++ T IN KEI + K Q +NQ + M +I
Sbjct: 625 IQSIQNTFSSELEKKQNLIQKLESQIDTITINSQKEISDLKKKQMQLENQNLQEMSKI 682
>UniRef50_A0DBV4 Cluster: Chromosome undetermined scaffold_45, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_45,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 571
Score = 32.7 bits (71), Expect = 7.1
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +1
Query: 148 ITSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKI-AKNDAQFK-NQTILFMDEIH 321
+ L +VI NI K LKFVK S ND +E A+N+ Q K NQ + D++
Sbjct: 400 LDKLKSVIDNITKVSEQLKFVKPDIKLSFFNDEEEENPAEAENNTQVKPNQNLQSNDQVK 459
Query: 322 RFN 330
N
Sbjct: 460 SSN 462
>UniRef50_Q8F7Y2 Cluster: Holliday junction ATP-dependent DNA
helicase ruvB; n=5; Bacteria|Rep: Holliday junction
ATP-dependent DNA helicase ruvB - Leptospira interrogans
Length = 341
Score = 32.7 bits (71), Expect = 7.1
Identities = 23/79 (29%), Positives = 37/79 (46%)
Frame = +1
Query: 151 TSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFN 330
T+LA +ISN + L T G + + + + +N+ ILF+DEIH
Sbjct: 65 TTLAGIISN--ELGTRLTITSAPVITKGADLARLLTSMGENE-------ILFIDEIHTLP 115
Query: 331 KLQQDTFLPHVENGTITLI 387
K ++ P +EN I L+
Sbjct: 116 KKLEEILYPAMENYMIDLV 134
>UniRef50_Q82ZR7 Cluster: Sigma-54 dependent DNA-binding response
regulator; n=1; Enterococcus faecalis|Rep: Sigma-54
dependent DNA-binding response regulator - Enterococcus
faecalis (Streptococcus faecalis)
Length = 937
Score = 32.3 bits (70), Expect = 9.3
Identities = 20/70 (28%), Positives = 34/70 (48%)
Frame = +1
Query: 211 KLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDTFLPHVENGTITLIG 390
K + T +ND K +V++A D F LF+DE+HR Q+ ++ G T +G
Sbjct: 198 KKGSFTGAVNDQKGLVELA--DGGF-----LFLDEVHRLTSEGQEKLFTVLDKGYFTRMG 250
Query: 391 ATTENPSFSL 420
+ + S+
Sbjct: 251 EAEKQRNVSI 260
>UniRef50_Q185K2 Cluster: Putative sigma-54 interacting
transcription antiterminator; n=3; Clostridium
difficile|Rep: Putative sigma-54 interacting
transcription antiterminator - Clostridium difficile
(strain 630)
Length = 979
Score = 32.3 bits (70), Expect = 9.3
Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 18/107 (16%)
Frame = +1
Query: 289 NQTILFMDEIHRFNKLQQDTFLPHVENG--------------TITLIGATTENPSFSLNN 426
N ILF+DEIHR Q+ ++ G + +I ATTENP +L
Sbjct: 237 NNGILFLDEIHRLPAAGQEILFSLIDRGEFRRLGESSSNRKANVLIISATTENPDSNLLQ 296
Query: 427 ALLSRCRVVV----MDKLTTEDVMVILKKAIEYNEAKLINTKETVNK 555
R +V+ M + + I+ K E EAK +N + K
Sbjct: 297 TFRRRIPMVINLPNMSERPKSERYEIIIKFFE-REAKRVNKNFIITK 342
>UniRef50_A7HJU2 Cluster: ATPase AAA-2 domain protein; n=2;
Thermotogaceae|Rep: ATPase AAA-2 domain protein -
Fervidobacterium nodosum Rt17-B1
Length = 741
Score = 32.3 bits (70), Expect = 9.3
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 11/111 (9%)
Frame = +1
Query: 199 LKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRF-------NKLQQDTFL- 354
L +L A T + +E +K + + + ILF+DE+H L L
Sbjct: 244 LDLARLVAGTKFRGEFEERLKKLIDVLKKRTDVILFIDELHTVVGAGAAEGALDAGNILK 303
Query: 355 PHVENGTITLIGATT---ENPSFSLNNALLSRCRVVVMDKLTTEDVMVILK 498
P + GT+ +IGATT + AL R +V+ + + + E+ + ILK
Sbjct: 304 PELARGTLRVIGATTVEEYRKHIEKDKALARRFQVIFVPEPSIEETIEILK 354
>UniRef50_A6H1N5 Cluster: Putative uncharacterized protein; n=1;
Flavobacterium psychrophilum JIP02/86|Rep: Putative
uncharacterized protein - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 280
Score = 32.3 bits (70), Expect = 9.3
Identities = 29/153 (18%), Positives = 58/153 (37%), Gaps = 1/153 (0%)
Frame = +1
Query: 112 DKFQKY*YFFIPITSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKN 291
+K K F++P+ N+I + + +G + + + N +
Sbjct: 118 EKLSKQELFYLPVNKFQNLIIDNDLTVGGTSNLNGDLIVNGTTTLNNSLSVTNNSPVDFS 177
Query: 292 QTILFMDEIHRFNKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCR-VVVMDKL 468
++ + N L + P GT+ + GATT N +F++ N LS +V+D
Sbjct: 178 GNLVVNGTTNLNNSLSVNNQSPANLTGTLNVDGATTLNNTFTVANQSLSHLTGNLVVDGT 237
Query: 469 TTEDVMVILKKAIEYNEAKLINTKETVNKSDEP 567
T + + + N +N T ++ P
Sbjct: 238 TNLNNSLSVNNQSPANLTGTLNVNGTTTLNNSP 270
>UniRef50_A1ZYY6 Cluster: Putative uncharacterized protein; n=1;
Microscilla marina ATCC 23134|Rep: Putative
uncharacterized protein - Microscilla marina ATCC 23134
Length = 394
Score = 32.3 bits (70), Expect = 9.3
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Frame = +1
Query: 247 KEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQDTFLPHVENGTITLIGATTENPS----F 414
K+ +A + +FK+ T+ F D +H ++ TF+ + N ITL A T+ P
Sbjct: 142 KDWYPVALGNLRFKSNTVWFGDIMHDSKNTEKSTFIYNDGNDPITLNLAATKLPKHVQIV 201
Query: 415 SLNNALLSRCRVVVMDKLTTEDVMVILKKAI 507
S+ A + +V + ++V + K+AI
Sbjct: 202 SVFEAKVGETKVKKAKRKKKKEVTIKPKQAI 232
>UniRef50_Q8IE78 Cluster: Putative uncharacterized protein
PF13_0136; n=2; Plasmodium|Rep: Putative uncharacterized
protein PF13_0136 - Plasmodium falciparum (isolate 3D7)
Length = 376
Score = 32.3 bits (70), Expect = 9.3
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = +1
Query: 139 FIPITSLANVISNICKKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEI 318
F IT +I+ IC +QN K + +S I I+ I + D + KN +++I
Sbjct: 152 FYNITCFDKLINIICDQQNIGKLISVSNEKDNIISFMTIININQYD-EIKNLKEFLINKI 210
Query: 319 HRFNKLQQD 345
++ NK+ +
Sbjct: 211 NKINKINNN 219
>UniRef50_A2G2Z1 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 398
Score = 32.3 bits (70), Expect = 9.3
Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Frame = +1
Query: 289 NQTILFMDEIHRF--NKLQQDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMD 462
N I +EI +F N D + E IT+ + + N+ LS V
Sbjct: 114 NDNITLQNEIEKFIENINTPDQTITEAERSDITIEDRKND---IKIKNSQLSTKINEVES 170
Query: 463 KLTT--EDVMVILKKAIEYNEAKLINTKETVNKSDEPNQTIPR 585
++T ++ + K E + + L T E+ + ++PNQTIPR
Sbjct: 171 EITAIKAEIQSLTDKVNELDSSLLDRTDESSTEIEKPNQTIPR 213
>UniRef50_A0EH26 Cluster: Chromosome undetermined scaffold_96, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_96,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 458
Score = 32.3 bits (70), Expect = 9.3
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +1
Query: 184 KKQNNLKFVKLSATTSGINDVKEIVKIAKNDAQFKNQTILFMDEIHRFNKLQQD 345
K QN + ++L+ + ++ K+I+ K D +F NQTI + + F K +QD
Sbjct: 310 KLQNQAQQIQLA---NNVDQQKQIIDDKKKDVEFLNQTIQKLQSFYDFLKKEQD 360
>UniRef50_Q5UR98 Cluster: Uncharacterized protein L574; n=1;
Acanthamoeba polyphaga mimivirus|Rep: Uncharacterized
protein L574 - Mimivirus
Length = 281
Score = 32.3 bits (70), Expect = 9.3
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 9/109 (8%)
Frame = +1
Query: 187 KQNNLKFVKLSATTSGIND------VKEIVKIAKNDAQFK---NQTILFMDEIHRFNKLQ 339
K +N+K+ ++ + IND VK+I +I+ +D + + L+ EI FNKLQ
Sbjct: 31 KDDNIKYFEIHSNF--INDLLGGKFVKDI-EISVSDTHYNKLVDNNYLYGAEITDFNKLQ 87
Query: 340 QDTFLPHVENGTITLIGATTENPSFSLNNALLSRCRVVVMDKLTTEDVM 486
L ENG IT ++NP ++N RV + +L ED+M
Sbjct: 88 IKGTL---ENGVITFPQINSDNPLPKISNKQYIYIRVKITGEL--EDIM 131
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 576,270,522
Number of Sequences: 1657284
Number of extensions: 10980230
Number of successful extensions: 29105
Number of sequences better than 10.0: 185
Number of HSP's better than 10.0 without gapping: 28003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29040
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43977329078
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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