Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8e23
(612 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 4.1
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 4.1
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 4.1
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 4.1
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 22 5.4
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 22 5.4
AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase prec... 22 5.4
AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter... 21 7.2
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 21 9.5
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 21 9.5
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 9.5
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 21 9.5
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 22.2 bits (45), Expect = 4.1
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -2
Query: 599 SSIKYLGMV*LGSSLLFTVSFVLISFASLYSM 504
SS+ L + L SSL+FT+ +L +L ++
Sbjct: 17 SSVLSLSLTSLASSLIFTILCILTLALTLVTL 48
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 22.2 bits (45), Expect = 4.1
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -2
Query: 599 SSIKYLGMV*LGSSLLFTVSFVLISFASLYSM 504
SS+ L + L SSL+FT+ +L +L ++
Sbjct: 17 SSVLSLSLTSLASSLIFTILCILTLALTLVTL 48
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 22.2 bits (45), Expect = 4.1
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -2
Query: 599 SSIKYLGMV*LGSSLLFTVSFVLISFASLYSM 504
SS+ L + L SSL+FT+ +L +L ++
Sbjct: 17 SSVLSLSLTSLASSLIFTILCILTLALTLVTL 48
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 22.2 bits (45), Expect = 4.1
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -2
Query: 599 SSIKYLGMV*LGSSLLFTVSFVLISFASLYSM 504
SS+ L + L SSL+FT+ +L +L ++
Sbjct: 17 SSVLSLSLTSLASSLIFTILCILTLALTLVTL 48
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.8 bits (44), Expect = 5.4
Identities = 7/29 (24%), Positives = 19/29 (65%)
Frame = +1
Query: 172 SNICKKQNNLKFVKLSATTSGINDVKEIV 258
S++ ++ NLK + S+ +G+N+++ +
Sbjct: 173 SSVIEEAQNLKMSRGSSVVTGMNNIETYI 201
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 21.8 bits (44), Expect = 5.4
Identities = 7/29 (24%), Positives = 19/29 (65%)
Frame = +1
Query: 172 SNICKKQNNLKFVKLSATTSGINDVKEIV 258
S++ ++ NLK + S+ +G+N+++ +
Sbjct: 173 SSVIEEAQNLKMSRGSSVVTGMNNIETYI 201
>AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase
precursor protein.
Length = 156
Score = 21.8 bits (44), Expect = 5.4
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 546 SFLCINKFCFIVFNGFL 496
SF+ IN F F+ FN +
Sbjct: 15 SFILINYFIFLYFNSLV 31
>AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter
Am-EAAT protein.
Length = 543
Score = 21.4 bits (43), Expect = 7.2
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = -2
Query: 263 ILTISFTSLMPDVVADSFTNFKLFCFLQIL 174
++T+SFT+ + + A S + L L +L
Sbjct: 424 VITVSFTATLASIGAASIPSAALITMLIVL 453
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2
Query: 263 ILTISFTSLMPDVVADSFTNFKL 195
I TISF M + + TNF++
Sbjct: 376 IFTISFQKYMSGTLNSNETNFRI 398
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 21.0 bits (42), Expect = 9.5
Identities = 7/21 (33%), Positives = 15/21 (71%)
Frame = -3
Query: 220 LIVLQILNYFVFYKY*R*HLL 158
L++ ++ YF++++ R HLL
Sbjct: 18 LLIPALILYFIYFRISRRHLL 38
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.0 bits (42), Expect = 9.5
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -3
Query: 97 MMLHERNLPLVP 62
+M+HE N PL P
Sbjct: 1101 VMIHEENAPLPP 1112
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.0 bits (42), Expect = 9.5
Identities = 8/28 (28%), Positives = 14/28 (50%)
Frame = -1
Query: 396 CGSNQSYCTILHMGQESVLLKFVKPVDF 313
C C + + + LLK+++ VDF
Sbjct: 493 CDGKPGLCDAMKPTKGTELLKYLRKVDF 520
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,414
Number of Sequences: 438
Number of extensions: 3228
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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