Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8e13
(743 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1084 - 24232968-24234779 33 0.24
07_03_1710 - 28903614-28903673,28904982-28905146,28905453-289056... 31 0.73
09_04_0501 + 18153252-18153453,18153973-18154224,18154809-181550... 31 0.97
07_01_0146 - 1068314-1068656,1069349-1069507,1069642-1069835 31 0.97
12_01_0828 + 7663958-7664114,7664345-7664479,7664588-7664680,766... 30 1.7
08_02_1403 + 26811020-26811146,26813351-26813609,26814932-26814983 30 1.7
06_03_1310 + 29238644-29240260 30 1.7
04_04_1148 + 31264847-31264870,31264987-31265062,31265226-31265887 30 1.7
02_01_0478 - 3442222-3442227,3442777-3442848,3442966-3443137,344... 29 3.9
07_03_0940 + 22762176-22762345,22763207-22763252 29 5.2
01_03_0010 - 11608537-11608786,11608816-11608940,11609152-116092... 29 5.2
08_02_0461 - 17432493-17432878,17434327-17434611,17435911-17436406 28 6.8
07_03_0982 + 23116343-23117089,23117227-23117313,23117424-231175... 28 6.8
05_05_0127 - 22580720-22580808,22580936-22580987,22581703-225819... 28 6.8
04_04_1596 + 34684943-34686340,34688085-34688175,34688290-346883... 28 9.0
04_03_0243 - 13271384-13272865,13272987-13273248,13274617-13276067 28 9.0
01_01_1145 + 9073973-9074281,9075440-9075998,9076088-9076241,907... 28 9.0
01_01_0082 + 625198-625719 28 9.0
>08_02_1084 - 24232968-24234779
Length = 603
Score = 33.1 bits (72), Expect = 0.24
Identities = 28/100 (28%), Positives = 41/100 (41%), Gaps = 2/100 (2%)
Frame = +3
Query: 297 NYFNGFLNRPPHSQPTISSVTTRPQ-KPMYPSTRPPFFSGGYFGNNPYRPQPI-QHPSDY 470
N +GFL+ SQP S P P P +PP P + QP QH
Sbjct: 39 NVGDGFLHNSSSSQPPPSQQLPPPSLPPPLPQKQPP---SQQLPPPPQQQQPPPQHSLPP 95
Query: 471 VKPVHESNSQQFQEIYIPNIVGGPLNHVVGVSPAKPTRKP 590
P+ ++ Q Q+++IP + NH P++P P
Sbjct: 96 PPPLPQAPPPQQQKVHIPGVAAPAPNH----PPSQPNLPP 131
>07_03_1710 -
28903614-28903673,28904982-28905146,28905453-28905638,
28905784-28905927,28906281-28906460,28906559-28907215
Length = 463
Score = 31.5 bits (68), Expect = 0.73
Identities = 21/73 (28%), Positives = 28/73 (38%), Gaps = 1/73 (1%)
Frame = +3
Query: 324 PPHSQPTISSVTTRPQKPMYPSTRPPFFSGGYFGNNPYRPQPIQHPSDYVKPVHESNSQQ 503
PP PT + P P P TRPP P P P+ P + KP ++ +
Sbjct: 57 PPKPSPTPPPASP-PPAPTPPQTRPPSPPPQQQQPRPVSPPPVAEPYYWPKPYDYGDAPR 115
Query: 504 FQEIY-IPNIVGG 539
Q Y P + G
Sbjct: 116 EQPAYATPEVFRG 128
>09_04_0501 +
18153252-18153453,18153973-18154224,18154809-18155015,
18155198-18157046,18157334-18157381,18158222-18158291,
18158380-18158475,18158583-18158621,18158714-18158924,
18159037-18159178,18159275-18159407,18159762-18159878
Length = 1121
Score = 31.1 bits (67), Expect = 0.97
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = +3
Query: 345 ISSVTTRPQKPMYP--STRPPFFSGGYFGNNPYRPQPIQHPSDYVKPVHESNSQQFQEIY 518
+S TT + P +PP S G+F QP++ P+ P S QQ Q+
Sbjct: 43 LSLYTTAAKDPSLQLHDAKPPPPSQGFFLRTHDFLQPLEKPTPAPTPPPTSQLQQQQQQA 102
Query: 519 IPNIVGG-PLNHVVGVSP 569
P +G ++HV G P
Sbjct: 103 FPGGIGTFSISHVAGARP 120
>07_01_0146 - 1068314-1068656,1069349-1069507,1069642-1069835
Length = 231
Score = 31.1 bits (67), Expect = 0.97
Identities = 16/64 (25%), Positives = 26/64 (40%)
Frame = +3
Query: 162 PFNDLQENPQEDDANDCGEIEDYDENDLSSITXXXXXXXXXHGHRNYFNGFLNRPPHSQP 341
P +P E DAND E ++ DE + + +NY G+ P H +
Sbjct: 116 PERSTAPSPAESDANDEEEEDERDEEEEEEVVVVEEAAEEDTEGKNYSPGYTPSPDHPET 175
Query: 342 TISS 353
++S
Sbjct: 176 GVAS 179
>12_01_0828 +
7663958-7664114,7664345-7664479,7664588-7664680,
7667122-7668368
Length = 543
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +3
Query: 39 PLCPTNKIAPHRKIASYNQYTGRTFGAFYDLLAPNYSNSNSPFNDLQ 179
P C T AP + S + YTG F F D++ P Y+ + D+Q
Sbjct: 218 PRCTTTHAAP-AVVFSISGYTGNLFHDFTDVIVPLYNTAARYCGDVQ 263
>08_02_1403 + 26811020-26811146,26813351-26813609,26814932-26814983
Length = 145
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Frame = +3
Query: 324 PPHSQPTISSVTTRPQKPMYPSTRPPFFS-GGYF--GNNPYRPQP 449
PP P+ V PQ P P +PP GYF G PY P P
Sbjct: 61 PPQGYPSSHGVYPPPQGPYPPPHQPPPPGYQGYFNQGQQPYYPPP 105
>06_03_1310 + 29238644-29240260
Length = 538
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +3
Query: 324 PPHSQPTISSVTTRPQKPMYPSTRPPFFSGGYFGNNPYRPQPIQHPSDYVKP 479
P H P + + P+ M PST PP G ++ P P +HP YV P
Sbjct: 406 PSHLPPPPPTYSESPKSSMPPSTSPPSSHGASPPSSSSSP-PTEHPG-YVLP 455
>04_04_1148 + 31264847-31264870,31264987-31265062,31265226-31265887
Length = 253
Score = 30.3 bits (65), Expect = 1.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 375 PMYPSTRPPFFSGGYFGNNPYRPQPIQHP 461
P Y + P+++GGY+ P P ++HP
Sbjct: 199 PYYAANATPYYAGGYYPIPPPMPAMLRHP 227
>02_01_0478 -
3442222-3442227,3442777-3442848,3442966-3443137,
3443388-3443500,3443771-3443908,3444016-3444221,
3444317-3444388,3444484-3444532,3444635-3444714,
3444817-3445132,3445242-3445415,3445513-3446139,
3446235-3446297,3446399-3446470,3446602-3446664,
3446741-3446872,3447779-3447889,3449273-3449371,
3450117-3450194
Length = 880
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Frame = +3
Query: 435 YRPQPIQHPSD--YVKPVHESNSQQFQ 509
Y P+P++ SD Y KPVH NS+ F+
Sbjct: 458 YGPRPLKDFSDTCYYKPVHVQNSESFR 484
>07_03_0940 + 22762176-22762345,22763207-22763252
Length = 71
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 327 PHSQPTISSVTTRPQKPMYPSTRPPFFSGGY-FGNNPYRPQPIQHPS 464
P QPT + T P + Y PP + G + G NP PQP Q S
Sbjct: 3 PLQQPTGQAPYTAPPQGNYAPPPPPGYPGNFDVGMNP--PQPAQTQS 47
>01_03_0010 -
11608537-11608786,11608816-11608940,11609152-11609217,
11609741-11609872,11610507-11610608,11610743-11610940,
11611015-11611161,11611321-11611431,11613241-11613780,
11613847-11614003,11614148-11614297,11614375-11614514,
11615346-11615468,11615561-11615677,11617184-11617357,
11617768-11617909,11618076-11618194,11619773-11619955
Length = 991
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +1
Query: 328 PIPNLQYRR*QPVLRSQCILLLDHLSSQEDTSVIIHIDRNRYNIH 462
PIPN + ++ + Q +D+L + + +SVI H D ++ N+H
Sbjct: 537 PIPNRKAKQDTSLQDLQMKGFVDNLGTPDVSSVIGHYDTSKQNVH 581
>08_02_0461 - 17432493-17432878,17434327-17434611,17435911-17436406
Length = 388
Score = 28.3 bits (60), Expect = 6.8
Identities = 35/126 (27%), Positives = 47/126 (37%), Gaps = 2/126 (1%)
Frame = +3
Query: 138 PNYSNSNSPFNDLQENPQE-DDANDCGEIEDYDENDLSSITXXXXXXXXXHGHRNYFNGF 314
PN S S P Q+ D+ DCG + +N HG G+
Sbjct: 145 PNCSASWQPQRQRQKTIDRIPDSLDCGVTMERGKNKRDGSDNGLIFSNLMHGVAAGIYGY 204
Query: 315 LNRPPHSQPT-ISSVTTRPQKPMYPSTRPPFFSGGYFGNNPYRPQPIQHPSDYVKPVHES 491
PPH T S P+ YP PP+ Y ++ Y PQP+ +PS P S
Sbjct: 205 ---PPHQGYTQAQSYLLLPEA--YPP--PPWT---YPLSSAYPPQPVGYPSGGYPPAVYS 254
Query: 492 NSQQFQ 509
+S Q
Sbjct: 255 DSYLHQ 260
>07_03_0982 +
23116343-23117089,23117227-23117313,23117424-23117555,
23118135-23118269,23118644-23118709,23118797-23118907,
23119237-23119329,23119555-23119659,23119752-23119829
Length = 517
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
Frame = +3
Query: 318 NRPPHSQPTISSVTTRPQKPMYPSTRPPFFSGGYFGNNPYRPQ--PIQHPSDYVKPVHES 491
N PPH + + P P ++ PP+ GGY P P P + Y P +
Sbjct: 25 NPPPHPASSAADAAP-PTIPASYASAPPYSVGGYSDQPPSAPSYAPPPQYAGYAPPYNNP 83
Query: 492 N 494
N
Sbjct: 84 N 84
>05_05_0127 -
22580720-22580808,22580936-22580987,22581703-22581908,
22582019-22582152,22582239-22582369,22583333-22583392,
22583615-22583755,22583880-22584347,22584524-22584686,
22585373-22585476,22585755-22585853,22586177-22586281,
22586516-22586596,22587168-22587986,22588497-22588553
Length = 902
Score = 28.3 bits (60), Expect = 6.8
Identities = 25/128 (19%), Positives = 48/128 (37%), Gaps = 15/128 (11%)
Frame = +3
Query: 63 APHRKIASYNQ---YTGRTFGAFYDL----LAPNYSNSNSPFNDLQENPQEDDANDCGEI 221
A H+ + S+ Y G T +Y+ AP Y SNS + + N + N
Sbjct: 145 AAHQPLTSFQNSESYVGPTSNTYYNAGGHQTAPGYGTSNSYYQNSTWNGGSFENNYAQSY 204
Query: 222 EDYDENDLSSITXXXXXXXXXHGHRNYFNGFLNRPPHSQP--------TISSVTTRPQKP 377
++Y ++ +++ ++ +N + H+ P +S+
Sbjct: 205 QNYPSSNTNTVQHSISVPTNSFSYQQQYNQWPYYYNHTVPNPAGDPVGNSNSIVNTTSSY 264
Query: 378 MYPSTRPP 401
YPS +PP
Sbjct: 265 SYPSIQPP 272
>04_04_1596 +
34684943-34686340,34688085-34688175,34688290-34688354,
34688530-34688581,34688747-34688829,34688942-34689035,
34689468-34690051
Length = 788
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 327 PHSQPTISSVTTRPQKPMYPSTRPP 401
PH P +SS + R P PS+ PP
Sbjct: 119 PHPSPRVSSSSPRSPTPSPPSSSPP 143
>04_03_0243 - 13271384-13272865,13272987-13273248,13274617-13276067
Length = 1064
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 192 EDDANDCGEIEDYDENDLSSIT-XXXXXXXXXHGHRNY 302
+DD ND G+++D D+ S IT HGH ++
Sbjct: 914 DDDDNDAGDVDDDDDGVPSDITHEGGGDDSGEHGHSHH 951
>01_01_1145 +
9073973-9074281,9075440-9075998,9076088-9076241,
9077475-9077565,9077722-9077793,9077879-9078390,
9078854-9078923,9079514-9079579,9080266-9080570,
9080872-9081006,9081141-9081204,9081429-9081574,
9081669-9081773,9082310-9082490
Length = 922
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/57 (31%), Positives = 23/57 (40%)
Frame = +3
Query: 291 HRNYFNGFLNRPPHSQPTISSVTTRPQKPMYPSTRPPFFSGGYFGNNPYRPQPIQHP 461
H + G++N PP+ P P PM P PP F N P P P+ P
Sbjct: 275 HLPHTLGYINGPPYPGPMPPMYYYMPAVPMEPMRGPPRF----VQNQP-PPHPVLSP 326
>01_01_0082 + 625198-625719
Length = 173
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +3
Query: 324 PPHSQPTISSVTTRPQKPMYPSTRPPFFSGGYFGNNPYRPQPIQHPS 464
PP S P ++ P P PP+ GGY Y P P +P+
Sbjct: 74 PPPSPPPVAYPP--PTTPSTNCPPPPYGGGGYNPTPSYNPTPGYNPT 118
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,737,934
Number of Sequences: 37544
Number of extensions: 369548
Number of successful extensions: 1156
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1150
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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