Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8e13
(743 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25799| Best HMM Match : DUF618 (HMM E-Value=2e-26) 34 0.14
SB_26407| Best HMM Match : UQ_con (HMM E-Value=0) 34 0.14
SB_26688| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_6854| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.56
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 31 0.75
SB_11299| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.75
SB_20267| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_5838| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_663| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07) 30 2.3
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_16486| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_52736| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_11711| Best HMM Match : 7tm_1 (HMM E-Value=8.5e-10) 29 4.0
SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056) 29 5.3
SB_59487| Best HMM Match : DUF1014 (HMM E-Value=2.4) 29 5.3
SB_20263| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_20262| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_54030| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_22325| Best HMM Match : Nucleoplasmin (HMM E-Value=5.8) 28 7.0
SB_45944| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_37360| Best HMM Match : ETS_PEA3_N (HMM E-Value=0.65) 28 7.0
SB_6548| Best HMM Match : Helicase_C (HMM E-Value=0.003) 28 7.0
SB_3546| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-29) 28 7.0
SB_48673| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 28 9.2
SB_30717| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.56) 28 9.2
SB_13894| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_13452| Best HMM Match : Mak16 (HMM E-Value=2.6) 28 9.2
SB_43495| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_40708| Best HMM Match : SRCR (HMM E-Value=0) 28 9.2
SB_17752| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
>SB_25799| Best HMM Match : DUF618 (HMM E-Value=2e-26)
Length = 687
Score = 33.9 bits (74), Expect = 0.14
Identities = 31/109 (28%), Positives = 44/109 (40%), Gaps = 8/109 (7%)
Frame = +3
Query: 321 RPPHSQPTISSVTTRPQKPMYPSTRPPFFSGG---YFGNNPYRPQPIQH-----PSDYVK 476
RPPH +P P +P + RPP G G P+ P + H P + +
Sbjct: 373 RPPH-EP--GRPPYEPGRPPHEPGRPPHELGRPPHEPGRPPHEPGRLPHEPGRPPYEQRR 429
Query: 477 PVHESNSQQFQEIYIPNIVGGPLNHVVGVSPAKPTRKPTQYDVTSSRTP 623
P HE + Q F+ I + GGPL P +P +P + R P
Sbjct: 430 PPHEKSWQAFEHQRISHEHGGPL-----FEPGRPPHEPGRPSFDQRRPP 473
>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 1282
Score = 33.9 bits (74), Expect = 0.14
Identities = 31/109 (28%), Positives = 44/109 (40%), Gaps = 8/109 (7%)
Frame = +3
Query: 321 RPPHSQPTISSVTTRPQKPMYPSTRPPFFSGG---YFGNNPYRPQPIQH-----PSDYVK 476
RPPH +P P +P + RPP G G P+ P + H P + +
Sbjct: 139 RPPH-EP--GRPPYEPGRPPHEPGRPPHELGRPPHEPGRPPHEPGRLPHEPGRPPYEQRR 195
Query: 477 PVHESNSQQFQEIYIPNIVGGPLNHVVGVSPAKPTRKPTQYDVTSSRTP 623
P HE + Q F+ I + GGPL P +P +P + R P
Sbjct: 196 PPHEKSWQAFEHQRISHEHGGPL-----FEPGRPPHEPGRPSFDQRRPP 239
>SB_26688| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1199
Score = 33.1 bits (72), Expect = 0.24
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 13/116 (11%)
Frame = +3
Query: 312 FLNRPPHSQPTISSVTTRPQKPMYPSTRPPFFSGGYFGNNPYRP-------QPIQHPSDY 470
++++P H Q + + P++P+ P PP G P + QP P D
Sbjct: 177 YIHQPRHPQHVLVRSQSLPEEPVPPGRGPPPAPQSPPGRGPPQDQQMWVAHQPPPQPQDQ 236
Query: 471 VKP--VHESNSQQFQEIYIPNIVG--GPL-NHVVGVSPAKPT-RKPTQYDVTSSRT 620
V+ V ESN Q+ ++P P+ ++ S + PT KP Q+D +S +
Sbjct: 237 VEGNWVGESNGAASQQTWVPGSTATQHPMESYWAAFSGSPPTPEKPQQWDDSSDHS 292
>SB_6854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 31.9 bits (69), Expect = 0.56
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Frame = +3
Query: 15 SLQAITVNPLCPTNKIAPHRKIASYNQYTGRTFGAFYDLLAPNY----SNSNSPFNDLQE 182
SL+++ ++ + +IA ++ SYN G Y +A N +N+N+ ND
Sbjct: 32 SLKSLAISVVSSAIEIAIITRLGSYNIDMGPQIIFEYVAMATNIICTCTNNNNNDNDNDN 91
Query: 183 NPQEDDANDCGEIEDYDEND 242
+ +DD +D + +D D++D
Sbjct: 92 DDDDDDDDDDDDDDDDDDDD 111
>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
Length = 634
Score = 31.5 bits (68), Expect = 0.75
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 87 YNQYTGRTFGAFYDLLAPNYSNSNSPFNDLQENPQEDDA-NDCGEIEDYDEND 242
Y ++ G + F L + +N + ND EN +DD NDC ++ Y+ ND
Sbjct: 467 YGRWLGNDWVPF--LNDDDNNNDDDDDNDYDENVDDDDYDNDCDGVDTYNNND 517
>SB_11299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3762
Score = 31.5 bits (68), Expect = 0.75
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = +3
Query: 348 SSVTTRPQKPMYPSTRPPFFSGGYFGNNPYRPQPIQHPSDYVKPVHESNS 497
S RP P + T+P F G+F P P+Q P D K ES S
Sbjct: 3481 SDTVDRPS-PFHFQTQPVFGQPGFFSGFGKPPPPLQSPGDSEKVRQESKS 3529
>SB_20267| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 31.1 bits (67), Expect = 0.99
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 141 NYSNSNSPFNDLQENPQEDDANDCGEIEDYDEND 242
N +N N+ ND +N +D ND ++YD+ND
Sbjct: 152 NDNNDNNDNNDNNDNYDNNDNNDNDNNDNYDDND 185
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Frame = +3
Query: 141 NYSNSNSPFNDLQENPQEDDANDC----GEIEDYDEND 242
NY N+++ ND +N ++D ND G ++YD ND
Sbjct: 213 NYDNNDNNDNDNNDNNDKNDNNDNNDNNGNNDNYDNND 250
>SB_5838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 85
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +3
Query: 132 LAPNYSNSNSPFNDLQENPQEDDANDCGEIEDYDEND 242
L NY+N+N+ N+ N DD +D + +D D++D
Sbjct: 41 LGENYNNNNNNNNNNNNNNNNDDDDDDDDDDDDDDDD 77
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 29.9 bits (64), Expect = 2.3
Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 1/105 (0%)
Frame = +3
Query: 315 LNRPPHSQPTISSVTTRPQKPMYPSTRPPFFSGGYFGNNPYRPQPIQHPSDYVKPVHESN 494
++ P S IS+ + RP +PS+ P ++P P P +PS P SN
Sbjct: 460 ISNPSISTSPISNPSPRPHPSPHPSSNPSPNPSPNPSSDP-SPNPSSNPSSDPSPNPSSN 518
Query: 495 SQQFQEIYIPNIVGGPLNHVVGVSPAKPTRKPTQYDVTS-SRTPS 626
PN + P +S P+ P+ + ++ S PS
Sbjct: 519 PSSEPS---PNPISNPSISTSPISNPHPSSNPSPHPSSNPSSEPS 560
>SB_663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2028
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 168 NDLQENPQEDDANDCGEIEDYDENDL 245
ND+ + ++DD ND G +D D ND+
Sbjct: 1513 NDIDGSSEDDDDNDFGGCDDDDNNDI 1538
>SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07)
Length = 769
Score = 29.9 bits (64), Expect = 2.3
Identities = 31/114 (27%), Positives = 45/114 (39%), Gaps = 8/114 (7%)
Frame = +3
Query: 309 GFLNRPPHSQPTISSVTTRPQKPMYPSTRPPFFSGGYFGNNPYR----PQP-IQHPSDYV 473
G P P+ +S+T +P P PP GG G R +P + ++ V
Sbjct: 444 GGTKTPNAGTPSSASITVKPDSPQAAGAAPPAPQGGGGGGLMKRWFSTSKPNVAATTEEV 503
Query: 474 KPVHESNSQQFQEIYIP--NIVGGPL-NHVVGVSPAKPTRKPTQYDVTSSRTPS 626
P S+S E ++P N+ G L + TRK T V + TPS
Sbjct: 504 IPRQPSSSSANIEEFVPGDNLDSGFLDDRSAKQDKTNKTRKATVEKVDVAETPS 557
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 29.5 bits (63), Expect = 3.0
Identities = 32/129 (24%), Positives = 53/129 (41%), Gaps = 3/129 (2%)
Frame = +3
Query: 33 VNPLCPTNKIAPHRKIASYNQYT--GRTFGAFYDLLAPNYSNSNSPFNDLQENPQEDDAN 206
++ LC + IA + Y+++ G A + N + +P L + QE N
Sbjct: 222 LDALCQKHDIAYSKSKNLYDKHVADGNLLDAI-SRIPKNIRPARTPLGTLFDFYQETARN 280
Query: 207 DCGEIEDYDENDLSSITXXXXXXXXXHGHRNYFNGFLNRP-PHSQPTISSVTTRPQKPMY 383
C + ED DE++ SI+ R+ F L P P S T+S + + P K
Sbjct: 281 GCKKDEDEDEDEEKSISRASPFHNIL---RDKFGVPLEFPSPPSLSTLSPLASSPPKSCR 337
Query: 384 PSTRPPFFS 410
S P ++
Sbjct: 338 KSHPYPIYT 346
>SB_16486| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/38 (31%), Positives = 25/38 (65%)
Frame = +3
Query: 129 LLAPNYSNSNSPFNDLQENPQEDDANDCGEIEDYDEND 242
L+A +N+N+ +ND ++ +DD +D + +D D++D
Sbjct: 5 LVASINNNNNNNYNDDDDDDDDDDDDDDDDDDDDDDDD 42
>SB_52736| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = +3
Query: 141 NYSNSNSPFNDLQENPQEDDANDCGEIEDYDEND 242
+Y+N+N+ ND ++ +DD +D + +D D++D
Sbjct: 1 DYNNNNNNNNDDDDDDDDDDDDDDDDDDDDDDDD 34
>SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1974
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Frame = +3
Query: 303 FNGFLNRPP---HSQPTISSVTTRPQKPMYPSTRPPFFSGGYFGNNPYRPQPIQHPSDYV 473
F+ +PP HS+P +S T+PQ PS +P + Y PS
Sbjct: 1769 FDPLAGQPPQQSHSEPGSTSQQTQPQSMQGPSQQPSVQQSQQYNGQQYPQAQSYAPSATS 1828
Query: 474 KPVHESNSQQF 506
+ NSQ +
Sbjct: 1829 QTQTSYNSQSY 1839
>SB_11711| Best HMM Match : 7tm_1 (HMM E-Value=8.5e-10)
Length = 948
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 141 NYSNSNSPFNDLQENPQEDDANDCGEIEDYDEND 242
N +N+N+ N+ N +DD +D + +D D+ND
Sbjct: 29 NSNNNNNNNNNNNNNDDDDDDDDDDDDDDDDDND 62
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +3
Query: 141 NYSNSNSPFNDLQENPQEDDANDCGEIEDYDENDLSSIT 257
N +N+N+ ND ++ +DD +D + D D+N+ + +T
Sbjct: 34 NNNNNNNNNNDDDDDDDDDDDDDDDDDNDDDDNNKADLT 72
>SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056)
Length = 245
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = +3
Query: 327 PHSQPTISSVTTRP---QKPMYPSTRPPFFSGGYFGNNPYRPQP 449
P + T+++VT P Q+ +P P GGY G P P P
Sbjct: 89 PMATTTVTTVTNGPPLQQRQQHPPPGHPPMGGGYPGQQPGGPPP 132
>SB_59487| Best HMM Match : DUF1014 (HMM E-Value=2.4)
Length = 176
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 171 DLQENPQEDDANDCGEIEDYDEND 242
D+QE P+ +D +D GE +D D+ D
Sbjct: 98 DIQEQPENEDDDDGGEEDDGDDFD 121
>SB_20263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Frame = +3
Query: 141 NYSNSNSPFNDLQENPQEDDAND----CGEIEDYDEND 242
N +N N+ ND +N +D+ND C ++YD ND
Sbjct: 10 NGNNDNNDNNDNYDNNGNNDSNDNGDNCDNNDNYDNND 47
>SB_20262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 141 NYSNSNSPFNDLQENPQEDDANDCGEIE-DYDEND 242
NY+N N+ ND +N D ND + +YD ND
Sbjct: 133 NYNNDNNDNNDNNDNYDNYDDNDNNDNNYNYDNND 167
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 141 NYSNSNSPFNDLQENPQEDDANDCGE-IEDYDEND 242
N +N N+ ND +N +D+ND + ++YD ND
Sbjct: 199 NDNNDNNDNNDNYDNNGNNDSNDNNDNYDNYDNND 233
>SB_54030| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 460
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 141 NYSNSNSPFNDLQENPQEDDANDCGEIEDY-DEND 242
N N N+ ND+ + E+D ND + D +END
Sbjct: 149 NDDNDNNDMNDMNDMNDENDENDMNDENDMNNEND 183
>SB_22325| Best HMM Match : Nucleoplasmin (HMM E-Value=5.8)
Length = 282
Score = 28.3 bits (60), Expect = 7.0
Identities = 10/32 (31%), Positives = 22/32 (68%)
Frame = +3
Query: 147 SNSNSPFNDLQENPQEDDANDCGEIEDYDEND 242
+N+N+ +ND ++ +DD +D + +D D++D
Sbjct: 154 NNNNNNYNDDDDDDDDDDDDDDDDDDDDDDDD 185
>SB_45944| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 102 GRTFGAFYDLLAPNYSNSNSPFNDLQENPQE-DDANDCGEIEDYDEND 242
G +G F +L N + N +D+ ++ + DD ND + ++ D+ND
Sbjct: 3 GGGYGYFLELHNDNDDDDNDDNDDVDDDDDDNDDDNDNVDYDNVDDND 50
>SB_37360| Best HMM Match : ETS_PEA3_N (HMM E-Value=0.65)
Length = 861
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +3
Query: 27 ITVNPLCPTNKIAPHRKIASYNQYTGRTFGAFYDLLAPNYSNSNSPFNDLQE 182
I+ N L P + I+P ++ + Q TG T + +PN + SP + ++
Sbjct: 522 ISKNSLSPISPISPQKQRPGFRQRTGSTDSSGSPRSSPNSLSPRSPISPREQ 573
>SB_6548| Best HMM Match : Helicase_C (HMM E-Value=0.003)
Length = 1063
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +3
Query: 117 AFYDLLAPNYSNSNSPFNDLQENPQEDDANDCGEIEDYDENDLS 248
A +D+ P + + D E +DD +D +IE YD++D++
Sbjct: 801 ASHDIGDPGDDDDDIDDGDDIEGDDDDDIDDGDDIEGYDDDDIN 844
>SB_3546| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-29)
Length = 447
Score = 28.3 bits (60), Expect = 7.0
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +3
Query: 291 HRNYFNGFLNRPPHSQPTISSVTTRPQKPMYPSTRPPFFSGGYFGNNPYRPQPIQH-PSD 467
H FNG +PP++ P + +P Y + PPF + P+ QP+ H P
Sbjct: 364 HTPPFNG---QPPYNTPPFNG------QPSYNT--PPFNGQPPYNTPPFNGQPLSHTPPF 412
Query: 468 YVKPVHESNSQQFQEIYI 521
+P S FQ+I +
Sbjct: 413 SGQPTDRSIKSLFQQIQL 430
>SB_48673| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 54
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = +3
Query: 129 LLAPNYSNSNSPFNDLQENPQEDDANDCGEIEDYDEND 242
+L N +N+N+ ND ++ +DD +D + +D D++D
Sbjct: 14 VLNNNNNNNNNNDNDDDDDDDDDDDDDDDDDDDDDDDD 51
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 318 NRPPHSQPTISSVTTRPQKPMYPSTRP 398
++PP ++ T + T+P KP PST P
Sbjct: 160 SKPPVTETTTTKPETKPPKPPAPSTIP 186
>SB_30717| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.56)
Length = 499
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +3
Query: 333 SQPTISSVTTRPQKPMYPSTRPPFFSGGYFGNNPYRPQPIQHP 461
S+PT +P T P GGY G P+RP P++ P
Sbjct: 373 SEPTPRQRRRLESSGQFPQTMPRTPMGGYPGGYPFRP-PMRIP 414
>SB_13894| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 180 ENPQEDDANDCGEIEDYDENDLS 248
E P +DD D E+E DE+D+S
Sbjct: 77 EEPDDDDDGDDNELEKSDESDVS 99
>SB_13452| Best HMM Match : Mak16 (HMM E-Value=2.6)
Length = 163
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 141 NYSNSNSPFNDLQENPQEDDANDCGEIEDYDEND 242
N SN+N+ N+ N +DD +D + +D D++D
Sbjct: 108 NNSNNNNNNNNNNNNNDDDDDDDDDDDDDDDDDD 141
>SB_43495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1994
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +3
Query: 333 SQPTISSVTTRPQKPMYPSTRPPFFSGGYFGNNPYRPQPIQHP 461
S+PT +P T P GGY G P+RP P++ P
Sbjct: 1769 SEPTPRQRRRLESSGQFPQTMPRTPMGGYPGGYPFRP-PMRIP 1810
>SB_40708| Best HMM Match : SRCR (HMM E-Value=0)
Length = 1976
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/41 (26%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -1
Query: 620 SSGRSYIVLCRFSS----RLGWRNANHMIQGPTYNIWNINF 510
+ G++ + C SS + W+ +++GP YN++ NF
Sbjct: 1749 AKGQTAYIYCNISSYPTANITWKRNGAVLKGPRYNVFTNNF 1789
>SB_17752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 513
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3
Query: 147 SNSNSPFNDLQENPQEDDANDCGEIEDYDEND 242
+NS ND+ ++ +DD +D + +D DE+D
Sbjct: 461 NNSRDDDNDISDDDDDDDDDDDDDGDDDDEDD 492
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,742,833
Number of Sequences: 59808
Number of extensions: 431064
Number of successful extensions: 2014
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1916
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2010148439
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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