Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8e13
         (743 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     25   3.3  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   7.5  

>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
 Frame = +3

Query: 306 NGFLNRPPHSQPTISSVTTRPQKPMY-----PSTRPPFFSGGYFGNNPYRPQPIQH 458
           +G + R P  QP    +  RP +P +     P  RPP+     FG  P+  +P  H
Sbjct: 61  SGSVERNPAIQPV--GIFGRPGRPWWSVPGIPPFRPPWHPRPPFGGRPWWLRPPFH 114


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 11/43 (25%), Positives = 17/43 (39%)
 Frame = +3

Query: 324  PPHSQPTISSVTTRPQKPMYPSTRPPFFSGGYFGNNPYRPQPI 452
            PP +  +     + P  P+ P T  P     Y   N  +P P+
Sbjct: 1248 PPRALMSAGGFASPPASPLVPDTAVPDPHSLYAIPNKVKPSPL 1290


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 719,131
Number of Sequences: 2352
Number of extensions: 16434
Number of successful extensions: 25
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)