Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8e13
(743 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK127057-1|BAC86806.1| 752|Homo sapiens protein ( Homo sapiens ... 34 0.62
AK021455-1|BAB13831.1| 390|Homo sapiens protein ( Homo sapiens ... 34 0.62
Z46629-1|CAA86598.1| 509|Homo sapiens SOX9 protein. 33 0.82
S74506-1|AAB32870.1| 509|Homo sapiens inactivating mutations as... 33 0.82
BT006875-1|AAP35521.1| 509|Homo sapiens SRY (sex determining re... 33 0.82
BC056420-1|AAH56420.1| 509|Homo sapiens SRY (sex determining re... 33 0.82
BC014232-1|AAH14232.1| 756|Homo sapiens HNRPUL1 protein protein. 33 0.82
BC009988-1|AAH09988.2| 756|Homo sapiens HNRPUL1 protein protein. 33 0.82
BC007951-1|AAH07951.1| 509|Homo sapiens SRY (sex determining re... 33 0.82
BC002564-1|AAH02564.1| 856|Homo sapiens heterogeneous nuclear r... 33 0.82
AK128390-1|BAC87415.1| 141|Homo sapiens protein ( Homo sapiens ... 33 1.1
AJ007509-1|CAA07548.1| 856|Homo sapiens E1B-55kDa-associated pr... 33 1.1
AY235683-1|AAP13542.1| 1067|Homo sapiens PIAS-like protein hZimp... 32 2.5
AL391665-1|CAI40993.2| 1067|Homo sapiens zinc finger, MIZ-type c... 32 2.5
AB033050-1|BAA86538.2| 997|Homo sapiens KIAA1224 protein protein. 32 2.5
BC045671-1|AAH45671.1| 412|Homo sapiens chromosome 2 open readi... 31 4.4
AC013403-7|AAX93171.1| 412|Homo sapiens unknown protein. 31 4.4
X56687-1|CAA40016.1| 727|Homo sapiens autoantigen NOR-90 protein. 31 5.8
X53461-1|CAA37548.1| 764|Homo sapiens protein ( Human mRNA for ... 31 5.8
X53390-1|CAA37469.1| 764|Homo sapiens protein ( Human mRNA for ... 31 5.8
U65487-1|AAC51239.1| 654|Homo sapiens ribosomal RNA upstream bi... 31 5.8
BC042297-1|AAH42297.1| 727|Homo sapiens upstream binding transc... 31 5.8
AF005654-1|AAC51676.1| 778|Homo sapiens actin-binding double-zi... 30 7.6
AB208909-1|BAD92146.1| 475|Homo sapiens integrin beta chain, be... 30 7.6
>AK127057-1|BAC86806.1| 752|Homo sapiens protein ( Homo sapiens
cDNA FLJ45114 fis, clone BRAWH3034775, highly similar
to Homo sapiens E1B-55kDa-associated protein 5
(E1B-AP5). ).
Length = 752
Score = 33.9 bits (74), Expect = 0.62
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Frame = +3
Query: 303 FNGFLNRPPHSQPTISSVTTRPQKPMYPSTRPPFFSGGYFGNN--PYRPQPIQHPSDYVK 476
F ++PP++Q S T P P P P + G Y G N PY P P Y +
Sbjct: 649 FQPSYSQPPYNQGGYSQGYTAPPPP--PPPPPAYNYGSYGGYNPAPYTPPPPPTAQTYPQ 706
Query: 477 PVHESNSQQFQE 512
P + Q Q+
Sbjct: 707 PSYNQYQQYAQQ 718
>AK021455-1|BAB13831.1| 390|Homo sapiens protein ( Homo sapiens
cDNA FLJ11393 fis, clone HEMBA1000591, weakly similar to
PTB-ASSOCIATED SPLICING FACTOR. ).
Length = 390
Score = 33.9 bits (74), Expect = 0.62
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Frame = +3
Query: 303 FNGFLNRPPHSQPTISSVTTRPQKPMYPSTRPPFFSGGYFGNN--PYRPQPIQHPSDYVK 476
F ++PP++Q S T P P P P + G Y G N PY P P Y +
Sbjct: 287 FQPSYSQPPYNQGGYSQGYTAPPPP--PPPPPAYNYGSYGGYNPAPYTPPPPPTAQTYPQ 344
Query: 477 PVHESNSQQFQE 512
P + Q Q+
Sbjct: 345 PSYNQYQQYAQQ 356
>Z46629-1|CAA86598.1| 509|Homo sapiens SOX9 protein.
Length = 509
Score = 33.5 bits (73), Expect = 0.82
Identities = 26/101 (25%), Positives = 38/101 (37%)
Frame = +3
Query: 324 PPHSQPTISSVTTRPQKPMYPSTRPPFFSGGYFGNNPYRPQPIQHPSDYVKPVHESNSQQ 503
PP Q PQ+P P +P + + P + Q ++ + P H S QQ
Sbjct: 353 PPAPQAPPQPQAAPPQQPAAPPQQPQAHTLTTLSSEPGQSQRTHIKTEQLSPSHYSEQQQ 412
Query: 504 FQEIYIPNIVGGPLNHVVGVSPAKPTRKPTQYDVTSSRTPS 626
I P N + SP+ P +QYD T + S
Sbjct: 413 HSP---QQIAYSPFN-LPHYSPSYPPITRSQYDYTDHQNSS 449
>S74506-1|AAB32870.1| 509|Homo sapiens inactivating mutations
associated with campomelic dysplasia and autosomal XY se
protein.
Length = 509
Score = 33.5 bits (73), Expect = 0.82
Identities = 26/101 (25%), Positives = 38/101 (37%)
Frame = +3
Query: 324 PPHSQPTISSVTTRPQKPMYPSTRPPFFSGGYFGNNPYRPQPIQHPSDYVKPVHESNSQQ 503
PP Q PQ+P P +P + + P + Q ++ + P H S QQ
Sbjct: 353 PPAPQAPPQPQAAPPQQPAAPPQQPQAHTLTTLSSEPGQSQRTHIKTEQLSPSHYSEQQQ 412
Query: 504 FQEIYIPNIVGGPLNHVVGVSPAKPTRKPTQYDVTSSRTPS 626
I P N + SP+ P +QYD T + S
Sbjct: 413 HSP---QQIAYSPFN-LPHYSPSYPPITRSQYDYTDHQNSS 449
>BT006875-1|AAP35521.1| 509|Homo sapiens SRY (sex determining
region Y)-box 9 (campomelic dysplasia, autosomal
sex-rever protein.
Length = 509
Score = 33.5 bits (73), Expect = 0.82
Identities = 26/101 (25%), Positives = 38/101 (37%)
Frame = +3
Query: 324 PPHSQPTISSVTTRPQKPMYPSTRPPFFSGGYFGNNPYRPQPIQHPSDYVKPVHESNSQQ 503
PP Q PQ+P P +P + + P + Q ++ + P H S QQ
Sbjct: 353 PPAPQAPPQPQAAPPQQPAAPPQQPQAHTLTTLSSEPGQSQRTHIKTEQLSPSHYSEQQQ 412
Query: 504 FQEIYIPNIVGGPLNHVVGVSPAKPTRKPTQYDVTSSRTPS 626
I P N + SP+ P +QYD T + S
Sbjct: 413 HSP---QQIAYSPFN-LPHYSPSYPPITRSQYDYTDHQNSS 449
>BC056420-1|AAH56420.1| 509|Homo sapiens SRY (sex determining
region Y)-box 9 (campomelic dysplasia, autosomal
sex-rever protein.
Length = 509
Score = 33.5 bits (73), Expect = 0.82
Identities = 26/101 (25%), Positives = 38/101 (37%)
Frame = +3
Query: 324 PPHSQPTISSVTTRPQKPMYPSTRPPFFSGGYFGNNPYRPQPIQHPSDYVKPVHESNSQQ 503
PP Q PQ+P P +P + + P + Q ++ + P H S QQ
Sbjct: 353 PPAPQAPPQPQAAPPQQPAAPPQQPQAHTLTTLSSEPGQSQRTHIKTEQLSPSHYSEQQQ 412
Query: 504 FQEIYIPNIVGGPLNHVVGVSPAKPTRKPTQYDVTSSRTPS 626
I P N + SP+ P +QYD T + S
Sbjct: 413 HSP---QQIAYSPFN-LPHYSPSYPPITRSQYDYTDHQNSS 449
>BC014232-1|AAH14232.1| 756|Homo sapiens HNRPUL1 protein protein.
Length = 756
Score = 33.5 bits (73), Expect = 0.82
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = +3
Query: 318 NRPPHSQPTISSVTTRPQKPMYPSTRPPFFSGGYFGNN--PYRPQPIQHPSDYVKPVHES 491
++PP++Q S T P P P P + G Y G N PY P P Y +P +
Sbjct: 658 SQPPYNQGGYSQGYTAPPPP--PPPPPAYNYGSYGGYNPAPYTPPPPPTAQTYPQPSYNQ 715
Query: 492 NSQQFQE 512
Q Q+
Sbjct: 716 YQQYAQQ 722
>BC009988-1|AAH09988.2| 756|Homo sapiens HNRPUL1 protein protein.
Length = 756
Score = 33.5 bits (73), Expect = 0.82
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = +3
Query: 318 NRPPHSQPTISSVTTRPQKPMYPSTRPPFFSGGYFGNN--PYRPQPIQHPSDYVKPVHES 491
++PP++Q S T P P P P + G Y G N PY P P Y +P +
Sbjct: 658 SQPPYNQGGYSQGYTAPPPP--PPPPPAYNYGSYGGYNPAPYTPPPPPTAQTYPQPSYNQ 715
Query: 492 NSQQFQE 512
Q Q+
Sbjct: 716 YQQYAQQ 722
>BC007951-1|AAH07951.1| 509|Homo sapiens SRY (sex determining
region Y)-box 9 (campomelic dysplasia, autosomal
sex-rever protein.
Length = 509
Score = 33.5 bits (73), Expect = 0.82
Identities = 26/101 (25%), Positives = 38/101 (37%)
Frame = +3
Query: 324 PPHSQPTISSVTTRPQKPMYPSTRPPFFSGGYFGNNPYRPQPIQHPSDYVKPVHESNSQQ 503
PP Q PQ+P P +P + + P + Q ++ + P H S QQ
Sbjct: 353 PPAPQAPPQPQAAPPQQPAAPPQQPQAHTLTTLSSEPGQSQRTHIKTEQLSPSHYSEQQQ 412
Query: 504 FQEIYIPNIVGGPLNHVVGVSPAKPTRKPTQYDVTSSRTPS 626
I P N + SP+ P +QYD T + S
Sbjct: 413 HSP---QQIAYSPFN-LPHYSPSYPPITRSQYDYTDHQNSS 449
>BC002564-1|AAH02564.1| 856|Homo sapiens heterogeneous nuclear
ribonucleoprotein U-like 1 protein.
Length = 856
Score = 33.5 bits (73), Expect = 0.82
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = +3
Query: 318 NRPPHSQPTISSVTTRPQKPMYPSTRPPFFSGGYFGNN--PYRPQPIQHPSDYVKPVHES 491
++PP++Q S T P P P P + G Y G N PY P P Y +P +
Sbjct: 758 SQPPYNQGGYSQGYTAPPPP--PPPPPAYNYGSYGGYNPAPYTPPPPPTAQTYPQPSYNQ 815
Query: 492 NSQQFQE 512
Q Q+
Sbjct: 816 YQQYAQQ 822
>AK128390-1|BAC87415.1| 141|Homo sapiens protein ( Homo sapiens
cDNA FLJ46533 fis, clone THYMU3036953, weakly similar
to Homo sapiens mosaic serine protease (MSP). ).
Length = 141
Score = 33.1 bits (72), Expect = 1.1
Identities = 18/79 (22%), Positives = 33/79 (41%)
Frame = +3
Query: 378 MYPSTRPPFFSGGYFGNNPYRPQPIQHPSDYVKPVHESNSQQFQEIYIPNIVGGPLNHVV 557
++PS P G G + + P P+ P P N+ + + +P+ G + +
Sbjct: 39 LFPSALPSGPGGQDPGASGWEPPPVGAPGSPAAPQSRGNAVRPASVLLPSACGQRTSRIT 98
Query: 558 GVSPAKPTRKPTQYDVTSS 614
G PA + P Q + +S
Sbjct: 99 GGLPAPDRKWPWQVSLQTS 117
>AJ007509-1|CAA07548.1| 856|Homo sapiens E1B-55kDa-associated
protein protein.
Length = 856
Score = 33.1 bits (72), Expect = 1.1
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = +3
Query: 318 NRPPHSQPTISSVTTRPQKPMYPSTRPPFFSGGYFGNN--PYRPQPIQHPSDYVKPVHES 491
++PP++Q S T P P P P + G Y G N PY P P Y +P +
Sbjct: 758 SQPPYNQGGYSQGYTGPPPP--PPPPPAYNYGSYGGYNPAPYTPPPPPTAQTYPQPSYNQ 815
Query: 492 NSQQFQE 512
Q Q+
Sbjct: 816 YQQYAQQ 822
>AY235683-1|AAP13542.1| 1067|Homo sapiens PIAS-like protein hZimp10
protein.
Length = 1067
Score = 31.9 bits (69), Expect = 2.5
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Frame = +3
Query: 291 HRNYFNGFLNRPPHSQPTI----SSVTTRPQKPMYP-STRPPFFSGGYFGNNPYRP 443
+ NY G +NRPP P S V P PM P S+ PP+ S P+ P
Sbjct: 487 YSNYSQGNVNRPPRPVPVANYPHSPVPGNPTPPMTPGSSIPPYLSPSQDVKPPFPP 542
>AL391665-1|CAI40993.2| 1067|Homo sapiens zinc finger, MIZ-type
containing 1 protein.
Length = 1067
Score = 31.9 bits (69), Expect = 2.5
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Frame = +3
Query: 291 HRNYFNGFLNRPPHSQPTI----SSVTTRPQKPMYP-STRPPFFSGGYFGNNPYRP 443
+ NY G +NRPP P S V P PM P S+ PP+ S P+ P
Sbjct: 487 YSNYSQGNVNRPPRPVPVANYPHSPVPGNPTPPMTPGSSIPPYLSPSQDVKPPFPP 542
>AB033050-1|BAA86538.2| 997|Homo sapiens KIAA1224 protein protein.
Length = 997
Score = 31.9 bits (69), Expect = 2.5
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Frame = +3
Query: 291 HRNYFNGFLNRPPHSQPTI----SSVTTRPQKPMYP-STRPPFFSGGYFGNNPYRP 443
+ NY G +NRPP P S V P PM P S+ PP+ S P+ P
Sbjct: 417 YSNYSQGNVNRPPRPVPVANYPHSPVPGNPTPPMTPGSSIPPYLSPSQDVKPPFPP 472
>BC045671-1|AAH45671.1| 412|Homo sapiens chromosome 2 open reading
frame 53 protein.
Length = 412
Score = 31.1 bits (67), Expect = 4.4
Identities = 27/92 (29%), Positives = 36/92 (39%), Gaps = 1/92 (1%)
Frame = +3
Query: 324 PPHSQPTISSVTTRPQKPMYPSTRPPFFSGGYFGNNPYRPQPIQHPSDYVKPVHESNSQQ 503
PP P S+ + RP P S P F G N+ + P P PS P Q
Sbjct: 45 PPSQPPFSSTQSRRPSSPPPASPSPGFQFGSCDSNSDFAPHPYS-PSLPSSPTF--FHQN 101
Query: 504 FQEIYIPNIVGGPLNHVVGVS-PAKPTRKPTQ 596
+ + P P NH + S P P+ P+Q
Sbjct: 102 YLSLPRPR-ASSPSNHWLYPSPPLTPSFSPSQ 132
>AC013403-7|AAX93171.1| 412|Homo sapiens unknown protein.
Length = 412
Score = 31.1 bits (67), Expect = 4.4
Identities = 27/92 (29%), Positives = 36/92 (39%), Gaps = 1/92 (1%)
Frame = +3
Query: 324 PPHSQPTISSVTTRPQKPMYPSTRPPFFSGGYFGNNPYRPQPIQHPSDYVKPVHESNSQQ 503
PP P S+ + RP P S P F G N+ + P P PS P Q
Sbjct: 45 PPSQPPFSSTQSRRPSSPPPASPSPGFQFGSCDSNSDFAPHPYS-PSLPSSPTF--FHQN 101
Query: 504 FQEIYIPNIVGGPLNHVVGVS-PAKPTRKPTQ 596
+ + P P NH + S P P+ P+Q
Sbjct: 102 YLSLPRPR-ASSPSNHWLYPSPPLTPSFSPSQ 132
>X56687-1|CAA40016.1| 727|Homo sapiens autoantigen NOR-90 protein.
Length = 727
Score = 30.7 bits (66), Expect = 5.8
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = +3
Query: 81 ASYNQYTGRTFGAFYDLLAPNYSNSNSPFNDLQENPQEDDANDCGEIEDYDEND 242
A+Y +Y + L PN +S + E+ ++D+ ++ E ED +E D
Sbjct: 606 AAYKEYISNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEED 659
>X53461-1|CAA37548.1| 764|Homo sapiens protein ( Human mRNA for
upstream binding factor (hUBF). ).
Length = 764
Score = 30.7 bits (66), Expect = 5.8
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = +3
Query: 81 ASYNQYTGRTFGAFYDLLAPNYSNSNSPFNDLQENPQEDDANDCGEIEDYDEND 242
A+Y +Y + L PN +S + E+ ++D+ ++ E ED +E D
Sbjct: 643 AAYKEYISNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEED 696
>X53390-1|CAA37469.1| 764|Homo sapiens protein ( Human mRNA for
upstream binding factor (hUBF). ).
Length = 764
Score = 30.7 bits (66), Expect = 5.8
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = +3
Query: 81 ASYNQYTGRTFGAFYDLLAPNYSNSNSPFNDLQENPQEDDANDCGEIEDYDEND 242
A+Y +Y + L PN +S + E+ ++D+ ++ E ED +E D
Sbjct: 643 AAYKEYISNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEED 696
>U65487-1|AAC51239.1| 654|Homo sapiens ribosomal RNA upstream
binding transcription factor protein.
Length = 654
Score = 30.7 bits (66), Expect = 5.8
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = +3
Query: 81 ASYNQYTGRTFGAFYDLLAPNYSNSNSPFNDLQENPQEDDANDCGEIEDYDEND 242
A+Y +Y + L PN +S + E+ ++D+ ++ E ED +E D
Sbjct: 485 AAYKEYISNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEED 538
>BC042297-1|AAH42297.1| 727|Homo sapiens upstream binding
transcription factor, RNA polymerase I protein.
Length = 727
Score = 30.7 bits (66), Expect = 5.8
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = +3
Query: 81 ASYNQYTGRTFGAFYDLLAPNYSNSNSPFNDLQENPQEDDANDCGEIEDYDEND 242
A+Y +Y + L PN +S + E+ ++D+ ++ E ED +E D
Sbjct: 606 AAYKEYISNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEED 659
>AF005654-1|AAC51676.1| 778|Homo sapiens actin-binding
double-zinc-finger protein protein.
Length = 778
Score = 30.3 bits (65), Expect = 7.6
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Frame = +3
Query: 291 HRNYFNGFLNRPPHSQPTISSVTTR-PQKPMYPSTRPPFFSGGYFGNNPYRPQPIQHPSD 467
HR+ G +N P +S+ + + T+R PQ P P S G PYRP +
Sbjct: 448 HRSTSQGSINSPVYSRHSYTPTTSRSPQHFHRPGNEP---SSGRNSPLPYRPDSLPLTPT 504
Query: 468 YVK-PVHESNSQQFQEIY 518
Y + P H Q IY
Sbjct: 505 YAQAPKHFHVPDQGINIY 522
>AB208909-1|BAD92146.1| 475|Homo sapiens integrin beta chain, beta
2 precursor variant protein.
Length = 475
Score = 30.3 bits (65), Expect = 7.6
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 412 EDTSVIIHIDRNRYNIHLTM*NLSTKAIANNFKKFIFQIL*VGP*IMW 555
ED+S ++H+ +N YN+ L + T +A+N +L V ++W
Sbjct: 392 EDSSNVVHLIKNAYNVSLPHHSAGTHGVASNLPTAGQLLLQVSRRVVW 439
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,549,772
Number of Sequences: 237096
Number of extensions: 2057282
Number of successful extensions: 10649
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 10284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10625
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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