Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8e13
(743 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL033514-4|CAA22094.2| 827|Caenorhabditis elegans Hypothetical ... 37 0.013
Z99942-1|CAB17068.2| 454|Caenorhabditis elegans Hypothetical pr... 33 0.16
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 33 0.28
Z69302-6|CAL36504.1| 472|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z82275-1|CAB05237.2| 472|Caenorhabditis elegans Hypothetical pr... 31 1.1
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 30 1.5
AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical... 30 1.5
AC006831-1|AAF39995.1| 558|Caenorhabditis elegans Hypothetical ... 30 1.5
U97593-7|AAB52878.1| 591|Caenorhabditis elegans Prion-like-(q/n... 30 2.0
U97593-6|AAB52879.2| 925|Caenorhabditis elegans Prion-like-(q/n... 30 2.0
U97593-5|AAB52880.1| 1175|Caenorhabditis elegans Prion-like-(q/n... 30 2.0
U28942-1|AAA68355.2| 441|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 29 2.6
U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical p... 29 3.5
AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical ... 29 3.5
Z83111-3|CAB05536.1| 361|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z66515-2|CAA91353.1| 543|Caenorhabditis elegans Hypothetical pr... 29 4.6
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 29 4.6
S66757-1|AAB28819.1| 581|Caenorhabditis elegans Egl-43 protein. 29 4.6
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 29 4.6
AC006693-9|AAF60388.1| 93|Caenorhabditis elegans Hypothetical ... 29 4.6
Z29561-4|CAD91697.1| 498|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z29561-2|CAD54152.1| 882|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z29561-1|CAA82667.2| 861|Caenorhabditis elegans Hypothetical pr... 28 6.1
U73679-1|AAC67305.1| 861|Caenorhabditis elegans YNK1-a protein. 28 6.1
AL117202-4|CAB55095.3| 222|Caenorhabditis elegans Hypothetical ... 28 6.1
AF106573-7|AAC78158.1| 838|Caenorhabditis elegans Hypothetical ... 28 6.1
AC024211-5|AAF36063.2| 1119|Caenorhabditis elegans Hypothetical ... 28 6.1
Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z75953-3|CAB00100.1| 611|Caenorhabditis elegans Hypothetical pr... 28 8.0
AF166171-1|AAD49860.1| 611|Caenorhabditis elegans adducin-head-... 28 8.0
>AL033514-4|CAA22094.2| 827|Caenorhabditis elegans Hypothetical
protein Y75B8A.3 protein.
Length = 827
Score = 37.1 bits (82), Expect = 0.013
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +3
Query: 324 PPHSQPTISSVTTRPQKPMYPSTRPPFFSGGYFGNNPYRPQPIQHPSDY--VKPVHESNS 497
P + PT V +PMY + + + GY N Y+PQPI S Y ++ S
Sbjct: 261 PTPAVPTNPQVQVTTPRPMYDQSNTGYGNAGYQNNYGYQPQPITSTSSYNSANAQYDDPS 320
Query: 498 QQFQE 512
QQ +
Sbjct: 321 QQLAQ 325
>Z99942-1|CAB17068.2| 454|Caenorhabditis elegans Hypothetical
protein H13N06.2 protein.
Length = 454
Score = 33.5 bits (73), Expect = 0.16
Identities = 38/144 (26%), Positives = 52/144 (36%), Gaps = 9/144 (6%)
Frame = +3
Query: 306 NGFLNRPPHSQPTISSVTTRP-----QKPMYPSTRPPFFSGG-YFGNNPYRPQPIQHPSD 467
+ F PH P S VTT P PM P T P S GN P+ P P S
Sbjct: 54 SNFRTARPHQSPGTSPVTTTPVAPTNSLPMPPGTSTPSLSSAENSGNGPHPPAPPPQSSA 113
Query: 468 YVKPVHESNSQQFQEIYIPNIVGGPLNHV--VGVSPAK-PTRKPTQYDVTSSRTPSXXXX 638
+ S+ Q+ + V + +GV+ T KP + V +P
Sbjct: 114 ESSGLPSSSEQEEEASAQNTTVPSSTEELMTLGVTETNMKTEKPDK-GVLKILSPVFEDI 172
Query: 639 XXXXXXXXXXXRLRKNNENNILGS 710
LR N+EN++ GS
Sbjct: 173 TKIDNISDSEEVLRVNSENSVEGS 196
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 32.7 bits (71), Expect = 0.28
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +3
Query: 144 YSNSNSPFNDLQENPQEDDANDCGEIEDYDENDLS 248
YS S++P +PQ+DD C + ++DE++++
Sbjct: 165 YSISSTPSEHYDGHPQDDDDESCSSMSEFDESEVN 199
>Z69302-6|CAL36504.1| 472|Caenorhabditis elegans Hypothetical
protein F40F8.11 protein.
Length = 472
Score = 31.1 bits (67), Expect = 0.86
Identities = 24/86 (27%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Frame = +3
Query: 348 SSVTTRPQKPMYPSTR--PPFFSGGY--FGNNPYRPQPIQHPSDYVKPVHESNSQQFQEI 515
S+ + P+YPS P FFS + PY P KPV + + Q
Sbjct: 28 SAQSQEQYNPVYPSLSGTPNFFSSSAQAYEAAPYYPAKSTAAKTTSKPVQKPYRRHHQRP 87
Query: 516 YIPNIVGGPLNHVVGVSPAKPTRKPT 593
G H+V + P+KP KP+
Sbjct: 88 NKAWSSGSQQFHLVTIDPSKPHEKPS 113
>Z82275-1|CAB05237.2| 472|Caenorhabditis elegans Hypothetical
protein K01G12.3 protein.
Length = 472
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 141 NYSNSNSPFNDLQENPQEDDANDCGEIEDYDEN 239
N N + D+ +N + +AND E EDYDE+
Sbjct: 16 NADNEDENVTDVVQNAGQAEANDWNEPEDYDED 48
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical protein
C01G8.9a protein.
Length = 1724
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = +3
Query: 333 SQPTISSVT-TRPQKPMYPSTRPPFFSGGYFGNNPYRPQPIQHPSDYVKPVHESNSQQFQ 509
S PT ++ T P ST+P +G Y N P P PS + H SQQ Q
Sbjct: 862 SAPTPQPLSSTMPVVAPSTSTQPTPTTGSYLANTLATPGPAHAPSSSMSHAHHVISQQ-Q 920
Query: 510 EIYIPNIV 533
Y P +
Sbjct: 921 HQYPPGCI 928
>AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical
protein C09G12.9 protein.
Length = 425
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +3
Query: 327 PHSQPTISS-VTTRPQKPMYPSTRPPFFSGGYFGNNPYRPQPIQHP 461
P SQPT+ + T YP + P+ S G G NPY P P
Sbjct: 172 PSSQPTMPTPYPTGSGAAPYPPSSTPYPSAGAMGYNPYMNVPQSTP 217
>AC006831-1|AAF39995.1| 558|Caenorhabditis elegans Hypothetical
protein ZK121.2 protein.
Length = 558
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +3
Query: 291 HRNYFNGFLNRPPHSQPTISSVTTRPQKPMYPSTRPPFFS-GGYFGNNPYRPQPIQHPSD 467
H ++ + + +PP S T V P P S GG + Y PQP+ P
Sbjct: 396 HHHHHHAHIQQPPTSNYTGYQVFEEMSMPSSNYQEPGMCSPGGTYYE--YVPQPVVQPQQ 453
Query: 468 YVKPV 482
Y +P+
Sbjct: 454 YARPI 458
>U97593-7|AAB52878.1| 591|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform b protein.
Length = 591
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Frame = +3
Query: 288 GHRNYFNGFLNRPPHSQPTISSVTTRPQKPMYPSTRPP---FFSGGYFGNN-PYRP-QPI 452
GH F + H Q T ++ TT PQ P++ +T P S Y + P +P +P
Sbjct: 339 GHSMKSTEFSSSRHHKQETTTTTTTTPQPPVFQTTTYPTTKTTSYNYSSSTIPSQPAKPS 398
Query: 453 QHPSDYVKPVHESNSQQ 503
+ Y +NS Q
Sbjct: 399 FNQESYTTHTERNNSSQ 415
>U97593-6|AAB52879.2| 925|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform c protein.
Length = 925
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Frame = +3
Query: 288 GHRNYFNGFLNRPPHSQPTISSVTTRPQKPMYPSTRPP---FFSGGYFGNN-PYRP-QPI 452
GH F + H Q T ++ TT PQ P++ +T P S Y + P +P +P
Sbjct: 673 GHSMKSTEFSSSRHHKQETTTTTTTTPQPPVFQTTTYPTTKTTSYNYSSSTIPSQPAKPS 732
Query: 453 QHPSDYVKPVHESNSQQ 503
+ Y +NS Q
Sbjct: 733 FNQESYTTHTERNNSSQ 749
>U97593-5|AAB52880.1| 1175|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform a protein.
Length = 1175
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Frame = +3
Query: 288 GHRNYFNGFLNRPPHSQPTISSVTTRPQKPMYPSTRPP---FFSGGYFGNN-PYRP-QPI 452
GH F + H Q T ++ TT PQ P++ +T P S Y + P +P +P
Sbjct: 923 GHSMKSTEFSSSRHHKQETTTTTTTTPQPPVFQTTTYPTTKTTSYNYSSSTIPSQPAKPS 982
Query: 453 QHPSDYVKPVHESNSQQ 503
+ Y +NS Q
Sbjct: 983 FNQESYTTHTERNNSSQ 999
>U28942-1|AAA68355.2| 441|Caenorhabditis elegans Hypothetical
protein F56D3.1 protein.
Length = 441
Score = 29.9 bits (64), Expect = 2.0
Identities = 28/85 (32%), Positives = 33/85 (38%), Gaps = 8/85 (9%)
Frame = +3
Query: 312 FLNRP--PHSQPTISSVT-TRPQKPMYPSTRPPFFSGGYFGNNPYRPQPI-QHPSDYVKP 479
F RP P QP + T+ P TRPPF F P +PQP P+ P
Sbjct: 204 FQPRPFQPRPQPAFTQAPFTQAPFTQAPFTRPPFRPQPNFATRPAQPQPAPTTPAPRFPP 263
Query: 480 VHESN--SQQFQE--IYIPNIVGGP 542
N S Q Q YI + GP
Sbjct: 264 QSGQNLRSGQCQASIFYISTPISGP 288
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
F47A4.2 protein.
Length = 3498
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +3
Query: 369 QKPMYPSTRPPFFSGGYFGNNPYRP-QPIQHPSDYVKPVHESNSQQFQEIY 518
Q+ Y PP + + NN Y+P Q P +Y +P H+S Q Q Y
Sbjct: 2734 QQGQYSQQPPPSYQQSSYPNN-YQPGQQGNQPPNYQQPSHQSMQQGHQAGY 2783
>U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical
protein B0207.1 protein.
Length = 564
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
Frame = +3
Query: 318 NRPPHSQPTISSVTTRPQKPMYPSTRPPFFS--GGYFGNNPYRPQPIQHP 461
N P QP I T PQ P P PP + +P P PI HP
Sbjct: 105 NLNPVQQPQIPVQRTPPQCPPPPVPHPPQITQMAPILPTSPAPPPPIPHP 154
>AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical
protein Y53C10A.9 protein.
Length = 1564
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -3
Query: 153 YSNNSELTNHRKLQKYDQYTDYNSQFFDEELFYSSGIM 40
YS SEL N +QKY +Y + F+ + + +G+M
Sbjct: 1113 YSIVSELHNFPPIQKYSDEIEYGFRIFNPSIGFLAGLM 1150
>Z83111-3|CAB05536.1| 361|Caenorhabditis elegans Hypothetical
protein F57G8.4 protein.
Length = 361
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -1
Query: 566 RNANHMIQGPTYNIWNINFLKLLAIAFVDRFYIVRWMLYRLRSIW 432
+N NH+ Q P + W INF+ L F FY R+ + + W
Sbjct: 130 QNYNHISQ-PAFG-WKINFIVLGVSTFFSIFYYFRYEVVNNGTFW 172
>Z66515-2|CAA91353.1| 543|Caenorhabditis elegans Hypothetical
protein R53.3a protein.
Length = 543
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 102 GRTFGAFYDLLAPNYSNSNSPFNDLQENPQEDDANDCGEIED 227
GRT G D PN SN+ N ++E +DAN C ED
Sbjct: 32 GRTIGVI-DKATPNDSNALLILNLIKEADDGEDANICMRQED 72
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 28.7 bits (61), Expect = 4.6
Identities = 23/89 (25%), Positives = 32/89 (35%), Gaps = 2/89 (2%)
Frame = +3
Query: 333 SQPTIS--SVTTRPQKPMYPSTRPPFFSGGYFGNNPYRPQPIQHPSDYVKPVHESNSQQF 506
+ PT S S T P P Y T P + SGG + + + P P + S Q+
Sbjct: 1685 TSPTYSPTSPTYSPTSPTYSPTSPSYESGGGYSPSSPKYSPSSPTYSPTSPSYSPTSPQY 1744
Query: 507 QEIYIPNIVGGPLNHVVGVSPAKPTRKPT 593
P +P+ PT PT
Sbjct: 1745 SPTSPQYSPSSPT-----YTPSSPTYNPT 1768
>S66757-1|AAB28819.1| 581|Caenorhabditis elegans Egl-43 protein.
Length = 581
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 102 GRTFGAFYDLLAPNYSNSNSPFNDLQENPQEDDANDCGEIED 227
GRT G D PN SN+ N ++E +DAN C ED
Sbjct: 32 GRTIGVI-DKATPNDSNALLILNLIKEADDGEDANICMRQED 72
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 28.7 bits (61), Expect = 4.6
Identities = 23/89 (25%), Positives = 32/89 (35%), Gaps = 2/89 (2%)
Frame = +3
Query: 333 SQPTIS--SVTTRPQKPMYPSTRPPFFSGGYFGNNPYRPQPIQHPSDYVKPVHESNSQQF 506
+ PT S S T P P Y T P + SGG + + + P P + S Q+
Sbjct: 1692 TSPTYSPTSPTYSPTSPTYSPTSPSYESGGGYSPSSPKYSPSSPTYSPTSPSYSPTSPQY 1751
Query: 507 QEIYIPNIVGGPLNHVVGVSPAKPTRKPT 593
P +P+ PT PT
Sbjct: 1752 SPTSPQYSPSSPT-----YTPSSPTYNPT 1775
>AC006693-9|AAF60388.1| 93|Caenorhabditis elegans Hypothetical
protein W02H5.1 protein.
Length = 93
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +3
Query: 333 SQPTISSVTTRPQKPMYPSTRPPF--FSGGYFGNNPYRPQPI 452
S P S+ + RP P+ T PP + G G RPQP+
Sbjct: 34 STPNRSAQSPRPNAPLLHDTHPPQSPLASGGGGGGENRPQPV 75
>Z29561-4|CAD91697.1| 498|Caenorhabditis elegans Hypothetical
protein R10E12.1d protein.
Length = 498
Score = 28.3 bits (60), Expect = 6.1
Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 7/99 (7%)
Frame = +3
Query: 321 RPPHSQPTISSVTT-----RPQKPMYPST-RPPFFSGGYFGNNPYRPQPIQHPSDYVKPV 482
RPP +P SV + R Q+ M + PP ++ P Q QHP Y +P+
Sbjct: 372 RPPPPRPAAPSVESPIPPPRTQQSMQATPGAPPQYNPYQQQQQPQMQQFQQHPGYYQQPM 431
Query: 483 HESNSQ-QFQEIYIPNIVGGPLNHVVGVSPAKPTRKPTQ 596
Q FQ Y P P G P+ + P Q
Sbjct: 432 PYGQPQPMFQPQYQPTF-AAPYPTFPGAFPSYQQQWPQQ 469
>Z29561-2|CAD54152.1| 882|Caenorhabditis elegans Hypothetical protein
R10E12.1b protein.
Length = 882
Score = 28.3 bits (60), Expect = 6.1
Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 7/99 (7%)
Frame = +3
Query: 321 RPPHSQPTISSVTT-----RPQKPMYPST-RPPFFSGGYFGNNPYRPQPIQHPSDYVKPV 482
RPP +P SV + R Q+ M + PP ++ P Q QHP Y +P+
Sbjct: 756 RPPPPRPAAPSVESPIPPPRTQQSMQATPGAPPQYNPYQQQQQPQMQQFQQHPGYYQQPM 815
Query: 483 HESNSQ-QFQEIYIPNIVGGPLNHVVGVSPAKPTRKPTQ 596
Q FQ Y P P G P+ + P Q
Sbjct: 816 PYGQPQPMFQPQYQPTF-AAPYPTFPGAFPSYQQQWPQQ 853
>Z29561-1|CAA82667.2| 861|Caenorhabditis elegans Hypothetical protein
R10E12.1a protein.
Length = 861
Score = 28.3 bits (60), Expect = 6.1
Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 7/99 (7%)
Frame = +3
Query: 321 RPPHSQPTISSVTT-----RPQKPMYPST-RPPFFSGGYFGNNPYRPQPIQHPSDYVKPV 482
RPP +P SV + R Q+ M + PP ++ P Q QHP Y +P+
Sbjct: 735 RPPPPRPAAPSVESPIPPPRTQQSMQATPGAPPQYNPYQQQQQPQMQQFQQHPGYYQQPM 794
Query: 483 HESNSQ-QFQEIYIPNIVGGPLNHVVGVSPAKPTRKPTQ 596
Q FQ Y P P G P+ + P Q
Sbjct: 795 PYGQPQPMFQPQYQPTF-AAPYPTFPGAFPSYQQQWPQQ 832
>U73679-1|AAC67305.1| 861|Caenorhabditis elegans YNK1-a protein.
Length = 861
Score = 28.3 bits (60), Expect = 6.1
Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 7/99 (7%)
Frame = +3
Query: 321 RPPHSQPTISSVTT-----RPQKPMYPST-RPPFFSGGYFGNNPYRPQPIQHPSDYVKPV 482
RPP +P SV + R Q+ M + PP ++ P Q QHP Y +P+
Sbjct: 735 RPPPPRPAAPSVESPIPPPRTQQSMQATPGAPPQYNPYQQQQQPQMQQFQQHPGYYQQPM 794
Query: 483 HESNSQ-QFQEIYIPNIVGGPLNHVVGVSPAKPTRKPTQ 596
Q FQ Y P P G P+ + P Q
Sbjct: 795 PYGQPQPMFQPQYQPTF-AAPYPTFPGAFPSYQQQWPQQ 832
>AL117202-4|CAB55095.3| 222|Caenorhabditis elegans Hypothetical
protein Y47D3A.5 protein.
Length = 222
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Frame = +3
Query: 474 KPVHESNSQQFQEIYIPNIVG--GPLNHVVGVSPAKPTRKPTQYDVTSSRTP 623
KP +QF+ + +P PL P PTR PT + RTP
Sbjct: 60 KPHQHRPRRQFRSVRLPRTPSRNSPLTPPTKTPPHTPTRTPTTESPVAPRTP 111
>AF106573-7|AAC78158.1| 838|Caenorhabditis elegans Hypothetical
protein F52D2.6 protein.
Length = 838
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/63 (23%), Positives = 28/63 (44%)
Frame = +3
Query: 27 ITVNPLCPTNKIAPHRKIASYNQYTGRTFGAFYDLLAPNYSNSNSPFNDLQENPQEDDAN 206
++++P+ P R + + N + R+F F D +SN+ S N D +N
Sbjct: 307 LSLSPIAPILSADFRRNLHTRNNWKQRSFSFFTDQYDVQHSNTGSHQNGQHRRSFSDSSN 366
Query: 207 DCG 215
+ G
Sbjct: 367 NHG 369
>AC024211-5|AAF36063.2| 1119|Caenorhabditis elegans Hypothetical
protein Y76B12C.2 protein.
Length = 1119
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -3
Query: 615 WTKLHRTVSVFE*AWLAKRQPHDSRAHLQYLEYKFLEIVGY 493
W KL R+V + E + + D R ++ E KFL++ GY
Sbjct: 889 WLKLARSVKIGEKPYKIVKARPDPRIPVEDREDKFLDVYGY 929
>Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical
protein F22G12.5 protein.
Length = 2396
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +3
Query: 366 PQKPMYPSTRPPFFSGGYFGNNPYRPQPIQHPSDYVKPV 482
P KP PS PP F FG+ P +P Y+ P+
Sbjct: 791 PWKPEDPSMTPPVFQLQSFGDQPSQPHTSLTNLLYIYPL 829
>Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical
protein F22G12.5 protein.
Length = 2396
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +3
Query: 366 PQKPMYPSTRPPFFSGGYFGNNPYRPQPIQHPSDYVKPV 482
P KP PS PP F FG+ P +P Y+ P+
Sbjct: 791 PWKPEDPSMTPPVFQLQSFGDQPSQPHTSLTNLLYIYPL 829
>Z75953-3|CAB00100.1| 611|Caenorhabditis elegans Hypothetical
protein F57F5.4a protein.
Length = 611
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +3
Query: 327 PHSQPTISSVTTRPQKPMYPSTRPPFFSGGYFGNNPYRPQPIQHPSDYVKPV 482
PH QP+ +SV RP + FS G P P+ HP ++ P+
Sbjct: 293 PHIQPSKTSVVNRPNQQNRKFQNYDMFSAGVISTATV-PAPMFHP--HITPI 341
>AF166171-1|AAD49860.1| 611|Caenorhabditis elegans
adducin-head-domain-related protein protein.
Length = 611
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +3
Query: 327 PHSQPTISSVTTRPQKPMYPSTRPPFFSGGYFGNNPYRPQPIQHPSDYVKPV 482
PH QP+ +SV RP + FS G P P+ HP ++ P+
Sbjct: 293 PHIQPSKTSVVNRPNQQNRKFQNYDMFSAGVISTATV-PAPMFHP--HITPI 341
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,636,860
Number of Sequences: 27780
Number of extensions: 336819
Number of successful extensions: 1221
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1220
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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