Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8e13
(743 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g62200.1 68416.m06988 expressed protein contains Pfam profile... 36 0.037
At5g49160.1 68418.m06085 DNA (cytosine-5-)-methyltransferase (AT... 33 0.26
At1g14910.1 68414.m01782 epsin N-terminal homology (ENTH) domain... 33 0.26
At5g62760.2 68418.m07879 nuclear protein ZAP-related similar to ... 31 0.61
At5g62760.1 68418.m07878 nuclear protein ZAP-related similar to ... 31 0.61
At5g04170.1 68418.m00405 calcium-binding EF hand family protein ... 31 0.81
At3g01560.1 68416.m00086 proline-rich family protein contains pr... 31 1.1
At2g23100.1 68415.m02756 DC1 domain-containing protein contains ... 31 1.1
At5g21160.1 68418.m02528 La domain-containing protein / proline-... 30 1.4
At3g24480.1 68416.m03070 leucine-rich repeat family protein / ex... 30 1.4
At5g04970.1 68418.m00526 pectinesterase, putative contains simil... 30 1.9
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 30 1.9
At2g43800.1 68415.m05445 formin homology 2 domain-containing pro... 29 2.5
At2g42010.1 68415.m05197 phospholipase D beta 1 / PLD beta 1 (PL... 29 2.5
At2g27380.1 68415.m03302 proline-rich family protein contains pr... 29 2.5
At1g75260.1 68414.m08743 isoflavone reductase family protein sim... 29 2.5
At5g19080.1 68418.m02268 zinc finger (C3HC4-type RING finger) fa... 29 3.3
At5g14540.1 68418.m01704 proline-rich family protein contains pr... 29 3.3
At3g28330.1 68416.m03539 F-box family protein-related contains T... 29 3.3
At1g06920.1 68414.m00735 ovate family protein 58% similar to ova... 29 3.3
At1g70985.1 68414.m08189 hydroxyproline-rich glycoprotein family... 29 4.3
At3g14860.2 68416.m01879 NHL repeat-containing protein contains ... 28 5.7
At3g14860.1 68416.m01878 NHL repeat-containing protein contains ... 28 5.7
At2g47330.1 68415.m05908 DEAD/DEAH box helicase, putative simila... 28 5.7
At2g30340.1 68415.m03692 LOB domain protein 13 / lateral organ b... 28 5.7
At1g27890.1 68414.m03417 CCR4-NOT transcription complex protein,... 28 5.7
At1g23540.1 68414.m02960 protein kinase family protein contains ... 28 5.7
At1g13940.1 68414.m01637 expressed protein 28 5.7
At5g14920.1 68418.m01750 gibberellin-regulated family protein si... 28 7.5
At3g24860.1 68416.m03118 hydroxyproline-rich glycoprotein family... 28 7.5
At3g22380.1 68416.m02825 expressed protein 28 7.5
At3g62680.1 68416.m07041 proline-rich family protein contains pr... 27 9.9
At2g26190.1 68415.m03145 calmodulin-binding family protein conta... 27 9.9
>At3g62200.1 68416.m06988 expressed protein contains Pfam profile
PF04396: Protein of unknown function, DUF537
Length = 673
Score = 35.5 bits (78), Expect = 0.037
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +3
Query: 327 PHSQPTISSVTTRPQKPMYPSTRPPFFSGGYFGNNPYRPQPIQHPSDYVK 476
P +Q T ++ T P P P ++PP +G N+ + Q PS+YV+
Sbjct: 443 PVTQSTTTTAHTYPSSPGVPPSQPPMVTGSGSSNDRWGTQECPPPSEYVQ 492
>At5g49160.1 68418.m06085 DNA (cytosine-5-)-methyltransferase
(ATHIM) identical to SP|P34881 DNA
(cytosine-5)-methyltransferase AthI (EC 2.1.1.37)
{Arabidopsis thaliana}
Length = 1534
Score = 32.7 bits (71), Expect = 0.26
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +3
Query: 15 SLQAITVNPLCPTNKIAPHRKI--ASYNQYTGRTFGAFYDLLAPNYSNSNSPFNDLQENP 188
SL+ + +NP +A RK A+ + R +G FY +P + + ++
Sbjct: 603 SLKELNLNPRAGMAPVASKRKAMQATTTRLVNRIWGEFYSNYSPEDPLQATAAENGEDEV 662
Query: 189 QEDDANDCGEIEDYDENDLSSIT 257
+E+ N E+E+ EN L+ T
Sbjct: 663 EEEGGNGEEEVEEEGENGLTEDT 685
>At1g14910.1 68414.m01782 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain; similar
to Chain A, Calm-N N-Terminal Domain Of Clathrin
Assembly Lymphoid Myeloid Leukaemia Protein, Pi(4,5)p2
Complex (GP:13399999) {Homo sapiens}
Length = 692
Score = 32.7 bits (71), Expect = 0.26
Identities = 26/87 (29%), Positives = 34/87 (39%), Gaps = 2/87 (2%)
Frame = +3
Query: 336 QPTISSVTTRPQKPMYPSTRPPFFSGGYFGNNPY-RPQPIQHPSDYVKPVHE-SNSQQFQ 509
+PT +PQ + PS PF G F P PQ + PV E SN+ F
Sbjct: 507 EPTYHQQEQQPQLQVAPSPANPFGDFGEFPIVPVSEPQSTTSFGAFPVPVSEPSNTTGFG 566
Query: 510 EIYIPNIVGGPLNHVVGVSPAKPTRKP 590
EI + + P G P P +P
Sbjct: 567 EIPVVPVTEPPNTTAFGEFPVVPVSEP 593
>At5g62760.2 68418.m07879 nuclear protein ZAP-related similar to
nuclear protein ZAP, Mus musculus, EMBL:AB033168 this
cDNA provides a truncated ORF likely due to a skipped
exon. An alternative ORF is provided.
Length = 383
Score = 31.5 bits (68), Expect = 0.61
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = +3
Query: 285 HGHRNYFNGFLNRPPHSQPTISSVTTRPQKPMYPSTRPPFFSGGYFGNNPYRPQP 449
H H N+ + RP +QP I + T P P P PP F NP P P
Sbjct: 9 HHHHNHNHQQQWRPAPTQPNICPICTVPHFPFCPPYPPP----SSFAYNPNFPPP 59
>At5g62760.1 68418.m07878 nuclear protein ZAP-related similar to
nuclear protein ZAP, Mus musculus, EMBL:AB033168 this
cDNA provides a truncated ORF likely due to a skipped
exon. An alternative ORF is provided.
Length = 661
Score = 31.5 bits (68), Expect = 0.61
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = +3
Query: 285 HGHRNYFNGFLNRPPHSQPTISSVTTRPQKPMYPSTRPPFFSGGYFGNNPYRPQP 449
H H N+ + RP +QP I + T P P P PP F NP P P
Sbjct: 9 HHHHNHNHQQQWRPAPTQPNICPICTVPHFPFCPPYPPP----SSFAYNPNFPPP 59
>At5g04170.1 68418.m00405 calcium-binding EF hand family protein low
similarity to peflin [Homo sapiens] GI:6015440; contains
INTERPRO:IPR002048 calcium-binding EF-hand domain
Length = 354
Score = 31.1 bits (67), Expect = 0.81
Identities = 19/60 (31%), Positives = 23/60 (38%), Gaps = 3/60 (5%)
Frame = +3
Query: 318 NRPPHSQPTISSVTTRP---QKPMYPSTRPPFFSGGYFGNNPYRPQPIQHPSDYVKPVHE 488
N PP+ T SS P KP S+ P + +G P P DY KP E
Sbjct: 33 NNPPYGSSTTSSPYAVPYGASKPQSSSSSAPTYGSSSYGAPPPSAPYAPSPGDYNKPPKE 92
>At3g01560.1 68416.m00086 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 511
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 8/71 (11%)
Frame = +3
Query: 318 NRPPHSQPTIS-----SVTTRPQKPMYPSTRPPFFSGGYFGNN--PYRPQPI-QHPSDYV 473
N PP+ P S + PQ+P YP PP S GY PY+ Q +P
Sbjct: 299 NPPPYQAPQTQTPHQPSYQSPPQQPQYPQQPPP--SSGYNPEEQPPYQMQSYPPNPPRQQ 356
Query: 474 KPVHESNSQQF 506
P + SQQF
Sbjct: 357 PPAGSTPSQQF 367
>At2g23100.1 68415.m02756 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 711
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +3
Query: 159 SPFNDLQENPQED-DANDCGEIEDYDENDLSSI 254
SPF D++++ +D D +D + +D D+NDLS I
Sbjct: 188 SPFFDVEDDDDDDVDLDDDDDDDDDDDNDLSDI 220
>At5g21160.1 68418.m02528 La domain-containing protein /
proline-rich family protein contains proline-rich
extensin domains, INTERPRO:IPR002965, PF05383: La domain
Length = 826
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +3
Query: 318 NRPPHSQPTISSVTTRPQKPMYPSTRPPFFSGGYFGNNPYRPQPIQHPSDYVKPVHES-N 494
N PP + +V P P P P +G F PY P P+ P PV ES N
Sbjct: 119 NGPPPPPYLVHAVPYHPP-PFPPMVPLPHAAGPDFPYAPYPPYPVPVP-----PVTESGN 172
Query: 495 SQQFQEIYIPNIVGGP 542
+Q Q +P ++ P
Sbjct: 173 EKQVQASPLPPVLPAP 188
>At3g24480.1 68416.m03070 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 494
Score = 30.3 bits (65), Expect = 1.4
Identities = 29/91 (31%), Positives = 35/91 (38%), Gaps = 2/91 (2%)
Frame = +3
Query: 324 PPHSQPTISSVTTRPQKP--MYPSTRPPFFSGGYFGNNPYRPQPIQHPSDYVKPVHESNS 497
PP S P V + P P P PP +S P P I + S PVH S+
Sbjct: 414 PPPSPPLPPPVYSPPPSPPVFSPPPSPPVYS-------PPPPPSIHYSSPPPPPVHHSSP 466
Query: 498 QQFQEIYIPNIVGGPLNHVVGVSPAKPTRKP 590
+ GPL V+GVS A P P
Sbjct: 467 PPPSPEF-----EGPLPPVIGVSYASPPPPP 492
>At5g04970.1 68418.m00526 pectinesterase, putative contains
similarity to pectinesterase from Vitis vinifera
GI:15081598, Prunus persica SP|Q43062; contains Pfam
profile PF01095 pectinesterase
Length = 624
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = +3
Query: 318 NRPPHSQPTISSVTTRPQKPMYPSTRPPFFSGGYFGNNPYRPQPIQHPS 464
++PP P S Q P P T+PP + P P P Q PS
Sbjct: 29 SQPPSHPPIQPSSQPPTQPPSQPPTQPPTQPPSHPPTQPPTPPPSQSPS 77
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 29.9 bits (64), Expect = 1.9
Identities = 29/89 (32%), Positives = 36/89 (40%), Gaps = 2/89 (2%)
Frame = +3
Query: 330 HSQPTISSVTTRPQKPMYPST-RPPFFSGGYFGNNPYRPQPIQHPSDYVKPV-HESNSQQ 503
+S P +V P P P+ PP Y+ N+P P P H S PV H S
Sbjct: 756 YSPPPPPTVHYNPPPPPSPAHYSPPPSPPVYYYNSP-PPPPAVHYSPPPPPVIHHSQPPP 814
Query: 504 FQEIYIPNIVGGPLNHVVGVSPAKPTRKP 590
P I GPL + G+S A P P
Sbjct: 815 ------PPIYEGPLPPIPGISYASPPPPP 837
>At2g43800.1 68415.m05445 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 894
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/59 (28%), Positives = 21/59 (35%)
Frame = +3
Query: 285 HGHRNYFNGFLNRPPHSQPTISSVTTRPQKPMYPSTRPPFFSGGYFGNNPYRPQPIQHP 461
H H+ + PPH + SSV P P P PFF + P P P
Sbjct: 62 HHHKKHLTT-TTPPPHEKHLFSSVANPPPPPPSPPHPNPFFPSSDPTSTASHPPPAPPP 119
>At2g42010.1 68415.m05197 phospholipase D beta 1 / PLD beta 1
(PLDBETA1) identical to SP|P93733 Phospholipase D beta 1
(EC 3.1.4.4) (AtPLDbeta1) (PLD beta 1) (PLDbeta)
{Arabidopsis thaliana}; contains Pfam profiles: PF00614
phospholipase D.active site motif, PF00168 C2 domain
Length = 1083
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +3
Query: 321 RPPHSQPTISSVTTRPQKPMYPSTRPPFFSGGYFGNNPYRPQPIQHPS-DYVKPVHESNS 497
RPP S+P T + P YP PP+ + + + P P QH S + P+ S++
Sbjct: 26 RPPSSEPYPPPPTNQYSAPYYPYPPPPYATPPPYAS---PPPPHQHTSGSHSGPLDYSHN 82
Query: 498 QQ 503
Q
Sbjct: 83 PQ 84
>At2g27380.1 68415.m03302 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 761
Score = 29.5 bits (63), Expect = 2.5
Identities = 24/85 (28%), Positives = 32/85 (37%), Gaps = 1/85 (1%)
Frame = +3
Query: 375 PMYPSTRPPFFSGGYFGNNPYRPQPIQHPSDYVKPVHESNSQQ-FQEIYIPNIVGGPLNH 551
P Y + PP +S P P PIQ P Y P++ Q+ Y P I P+
Sbjct: 53 PSYTTPPPPIYSP------PIYPPPIQKPPTYSPPIYPPPIQKPPTPTYSPPIYPPPIQ- 105
Query: 552 VVGVSPAKPTRKPTQYDVTSSRTPS 626
P PT P Y + P+
Sbjct: 106 ----KPPTPTYSPPIYPPPIQKPPT 126
>At1g75260.1 68414.m08743 isoflavone reductase family protein
similar to SP|P52577 Isoflavone reductase homolog P3 (EC
1.3.1.-) {Arabidopsis thaliana}; contains Pfam profile
PF02716: Isoflavone reductase
Length = 593
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 330 HSQPTISSVTTRPQKPMYPSTRPPFFSGGYFGNNPYRPQPIQHPS 464
+S ISS T+ P P P +RPPF G + +P PS
Sbjct: 14 NSPSRISSGTSSPSPPPTPPSRPPFRPAGIAQPSKSETKPKASPS 58
>At5g19080.1 68418.m02268 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 378
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Frame = +3
Query: 324 PPHSQPTISSVTTRP------QKPMYPSTRPPFFSGGYF-GNNP 434
P SQP S ++ RP Q YP PP+F+G + G NP
Sbjct: 64 PSSSQPPPSQISYRPYGQNYHQNQYYPQQAPPYFTGYHHNGFNP 107
>At5g14540.1 68418.m01704 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 547
Score = 29.1 bits (62), Expect = 3.3
Identities = 36/121 (29%), Positives = 49/121 (40%), Gaps = 17/121 (14%)
Frame = +3
Query: 315 LNRPPHSQPTISSVTTRPQKPMYPSTRPPFFS--GGYFGNNP------YRPQPIQHPSDY 470
L++PP+ P PQ+P YP PP GY P Y P P + P +
Sbjct: 323 LHQPPYQPP--------PQQPQYPQQPPPQLQHPSGYNPEEPPYPQQSYPPNPPRQPPSH 374
Query: 471 VKPVHESNSQQFQEI--YIPNIVGGP-----LNHVVGVSP-AKP-TRKPTQYDVTSSRTP 623
P + SQQ+ P++ GP G SP + P T P+QY T S P
Sbjct: 375 -PPPGSAPSQQYYNAPPTPPSMYDGPGGRSNSGFPSGYSPESYPYTGPPSQYGNTPSVKP 433
Query: 624 S 626
+
Sbjct: 434 T 434
>At3g28330.1 68416.m03539 F-box family protein-related contains
TIGRFAM TIGR01640: F-box protein interaction domain
Length = 349
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +2
Query: 497 PTISRNLYSKYCRWALESCGWRFASQAYSKTDTVRCNF 610
P + NL K C W LES WR + D+++ F
Sbjct: 230 PKVDGNLEDKLCVWRLESWQWRLVFEI--SLDSIKTGF 265
>At1g06920.1 68414.m00735 ovate family protein 58% similar to ovate
protein (GI:23429649) [Lycopersicon esculentum];
contains TIGRFAM TIGR01568 : uncharacterized
plant-specific domain TIGR01568
Length = 315
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +3
Query: 321 RPPHSQPTISSVTTRPQKPMYPSTRPPFFSGGYFGN 428
R HS P S TT+ +KP S P+ S YF N
Sbjct: 27 RKKHSLPLYSINTTKKRKPSSESKSLPYSSTSYFFN 62
>At1g70985.1 68414.m08189 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 135
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = +3
Query: 375 PMYPSTRPPFF----SGGYFGNNPYRPQPIQHPSDYVKPVHESN 494
P YPS PP++ SGGY G P P P Y KP H+++
Sbjct: 67 PNYPS--PPYYGGNPSGGYNGPPPPDPILPYFPFYYRKPPHQTD 108
>At3g14860.2 68416.m01879 NHL repeat-containing protein contains
Pfam profile PF01436: NHL repeat
Length = 493
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 444 QPIQHPSDYVKPVHESNSQQFQEIYIPNIVGGP 542
+P PSD VKPV SNS +F + + GP
Sbjct: 455 EPKPTPSDTVKPVEYSNSSKFDHYNMRSSKYGP 487
>At3g14860.1 68416.m01878 NHL repeat-containing protein contains
Pfam profile PF01436: NHL repeat
Length = 492
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 444 QPIQHPSDYVKPVHESNSQQFQEIYIPNIVGGP 542
+P PSD VKPV SNS +F + + GP
Sbjct: 454 EPKPTPSDTVKPVEYSNSSKFDHYNMRSSKYGP 486
>At2g47330.1 68415.m05908 DEAD/DEAH box helicase, putative similar
to RNA helicase [Rattus norvegicus] GI:897915; contains
Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271:
Helicase conserved C-terminal domain
Length = 760
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Frame = +3
Query: 345 ISSVTTRPQKPMYPSTRPP---FFSGGYFGNNPYRPQPIQHPSDYVKPVHESNSQQ 503
+++ + PQ YP+ RP F SGG G + R Q P + NS Q
Sbjct: 684 VAATPSNPQNQAYPNKRPSLMGFVSGGTIGGDMGRTQSQAPPVAPTQNASSHNSSQ 739
>At2g30340.1 68415.m03692 LOB domain protein 13 / lateral organ
boundaries domain protein 13 (LBD13) identical to LOB
DOMAIN 13 [Arabidopsis thaliana] GI:17227158 SP|Q9AT61
Length = 268
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/59 (28%), Positives = 22/59 (37%)
Frame = +3
Query: 348 SSVTTRPQKPMYPSTRPPFFSGGYFGNNPYRPQPIQHPSDYVKPVHESNSQQFQEIYIP 524
S++ P P P+ RPP P P + PS V SNS +Y P
Sbjct: 188 SAILLPPPPPPPPTPRPPRLLSSQPAPPPTPPVSLPSPSMVVSSSSSSNSSATNSMYNP 246
>At1g27890.1 68414.m03417 CCR4-NOT transcription complex protein,
putative contains similarity to SWISS-PROT:Q9UFF9
CCR4-NOT transcription complex, subunit 8 (CAF1-like
protein, CALIFp) [Human]
Length = 302
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = +3
Query: 363 RPQKPMYPSTRP-PFFSGGYFG 425
RP+ M+ + P P+F GGYFG
Sbjct: 271 RPRSVMFAAHHPNPYFGGGYFG 292
>At1g23540.1 68414.m02960 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 720
Score = 28.3 bits (60), Expect = 5.7
Identities = 28/101 (27%), Positives = 35/101 (34%), Gaps = 7/101 (6%)
Frame = +3
Query: 315 LNRPPHSQPTISSVTTRP-----QKPMYPSTRPPFFSGGYFGNNPYRPQPIQHPSDYVKP 479
L PP S P+ + T P Q P P P S +P P PIQ P
Sbjct: 130 LQSPPPSSPSPNVGPTNPESPPLQSPPAPPASDPTNSPPASPLDPTNPPPIQPSGPATSP 189
Query: 480 VHESNS--QQFQEIYIPNIVGGPLNHVVGVSPAKPTRKPTQ 596
N+ F + GP+ SP+K T P Q
Sbjct: 190 PANPNAPPSPFPTVPPKTPSSGPVVSPSLTSPSKGTPTPNQ 230
>At1g13940.1 68414.m01637 expressed protein
Length = 1005
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 150 NSNSPFNDLQENPQEDDANDCGEIEDYDENDLSSI 254
NS +P DL+ P+ DD + G I +++ SI
Sbjct: 702 NSKAPMIDLETVPESDDEEEDGNISGEKRSEVKSI 736
>At5g14920.1 68418.m01750 gibberellin-regulated family protein
similar to SP|P46689 Gibberellin-regulated protein 1
precursor {Arabidopsis thaliana}; contains Pfam profile
PF02704: Gibberellin regulated protein
Length = 275
Score = 27.9 bits (59), Expect = 7.5
Identities = 22/94 (23%), Positives = 29/94 (30%), Gaps = 3/94 (3%)
Frame = +3
Query: 321 RPPHSQPTISSVTTRPQKPMYPSTRPPFFSGGYFGNNPYRPQPIQHPSDYVKP---VHES 491
+PP PTI +P P PP Y P P P Y P V
Sbjct: 75 KPPVKPPTIPVTPVKPPVSTPPIKLPPVQPPTYKPPTPTVKPPSVQPPTYKPPTPTVKPP 134
Query: 492 NSQQFQEIYIPNIVGGPLNHVVGVSPAKPTRKPT 593
+ + P + P+ P P + PT
Sbjct: 135 TTSPVKPPTTPPVQSPPVQPPTYKPPTSPVKPPT 168
>At3g24860.1 68416.m03118 hydroxyproline-rich glycoprotein family
protein contains proline-rich domains,
INTERPRO:IPR000694
Length = 310
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 150 NSNSPFNDLQENPQEDDANDCGEIEDYDENDLSS 251
NSN+ + D +E +E+D N+ E E+ DE S
Sbjct: 166 NSNNRYVDDEEEDEEEDNNNYEEEEEEDERQSKS 199
>At3g22380.1 68416.m02825 expressed protein
Length = 1550
Score = 27.9 bits (59), Expect = 7.5
Identities = 23/86 (26%), Positives = 33/86 (38%)
Frame = +3
Query: 315 LNRPPHSQPTISSVTTRPQKPMYPSTRPPFFSGGYFGNNPYRPQPIQHPSDYVKPVHESN 494
L + PH+ TI++ + RP S+ P S G+ P S + P N
Sbjct: 763 LGQQPHAAATIAAASVRPPNSGITSSGPTATSTSMNGSASATPAGAPTMS-FSYPAMPGN 821
Query: 495 SQQFQEIYIPNIVGGPLNHVVGVSPA 572
Q+ I N P+ VG PA
Sbjct: 822 ETQYLAILQNNGYPFPVPAHVGAQPA 847
>At3g62680.1 68416.m07041 proline-rich family protein contains
proline-rich region, INTERPRO:IPR000694
Length = 313
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/55 (25%), Positives = 22/55 (40%)
Frame = +3
Query: 324 PPHSQPTISSVTTRPQKPMYPSTRPPFFSGGYFGNNPYRPQPIQHPSDYVKPVHE 488
PP P + T P P+ PP ++ + P +P P Y PV++
Sbjct: 92 PPVYTPPVYKPTLSPPVYTKPTIPPPVYTPPVYKPTPVYTKPTIPPPVYTPPVYK 146
>At2g26190.1 68415.m03145 calmodulin-binding family protein contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 532
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/28 (32%), Positives = 19/28 (67%)
Frame = -3
Query: 147 NNSELTNHRKLQKYDQYTDYNSQFFDEE 64
NN ++TN ++ ++Y+ +NS ++EE
Sbjct: 389 NNVDMTNVKRCSVNEEYSSFNSSGYEEE 416
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,618,927
Number of Sequences: 28952
Number of extensions: 310518
Number of successful extensions: 1137
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1123
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1643603136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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