Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8e11
(668 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52167-3 Cluster: Isoform 3 of P52167 ; n=1; Bombyx mor... 102 9e-21
UniRef50_P52167 Cluster: Transcription factor BCFI; n=3; Bombyx ... 102 9e-21
UniRef50_Q9XIE0 Cluster: F23H11.22 protein; n=1; Arabidopsis tha... 37 0.38
UniRef50_UPI0000EBE208 Cluster: PREDICTED: hypothetical protein;... 36 0.67
UniRef50_A0TSB4 Cluster: Putative uncharacterized protein; n=1; ... 35 2.0
UniRef50_Q8AWA8 Cluster: Type I keratin 10; n=2; Lampetra fluvia... 34 2.7
UniRef50_Q2RRA4 Cluster: Putative uncharacterized protein; n=1; ... 34 2.7
UniRef50_A7CR68 Cluster: Putative uncharacterized protein precur... 34 2.7
UniRef50_A3C044 Cluster: Putative uncharacterized protein; n=1; ... 34 3.6
UniRef50_A5USN2 Cluster: Glycosyl transferase, group 1; n=3; Chl... 33 4.7
UniRef50_Q1DSF1 Cluster: Putative uncharacterized protein; n=1; ... 33 4.7
UniRef50_Q4QFL6 Cluster: Poly(A) polymerase, putative; n=6; Tryp... 33 6.2
UniRef50_Q29R21 Cluster: RE09672p; n=3; Diptera|Rep: RE09672p - ... 33 6.2
UniRef50_A7I814 Cluster: Putative uncharacterized protein; n=1; ... 33 6.2
UniRef50_A1R8U8 Cluster: Putative integral membrane protein; n=1... 33 8.2
UniRef50_Q8S673 Cluster: Putative uncharacterized protein OSJNBa... 33 8.2
UniRef50_Q8L4H1 Cluster: P0696G06.23 protein; n=5; Oryza sativa|... 33 8.2
UniRef50_Q6BZG0 Cluster: Transcription elongation factor SPT5; n... 33 8.2
>UniRef50_P52167-3 Cluster: Isoform 3 of P52167 ; n=1; Bombyx
mori|Rep: Isoform 3 of P52167 - Bombyx mori (Silk moth)
Length = 477
Score = 102 bits (244), Expect = 9e-21
Identities = 58/126 (46%), Positives = 63/126 (50%)
Frame = +3
Query: 108 MDATMQTTKHEYQFEXXXXXXXXXXXXXXXXXXXRSYQELRPAHARDMQPYAHLDDALFK 287
MDATMQTTKHEYQFE AH+ DMQPY+HLDD+LFK
Sbjct: 1 MDATMQTTKHEYQFEGAAECGYPPGRTGLSPAA--QLPGAAAAHSLDMQPYSHLDDSLFK 58
Query: 288 PPTPGAASTDGVYLRRSPELXPSPERRDDYRPPAPLHYEXXXXXXXXXXXXXXXLEQGGG 467
PPTPG+A P P R RPPAPLHY+ LEQGGG
Sbjct: 59 PPTPGSAPPTASTCAGVPSSAPR-RRPRRLRPPAPLHYDDYAPPPPYSHDHHHHLEQGGG 117
Query: 468 GNGAAS 485
GNGAAS
Sbjct: 118 GNGAAS 123
Score = 78.6 bits (185), Expect = 1e-13
Identities = 39/41 (95%), Positives = 39/41 (95%)
Frame = +2
Query: 488 RVHAVRLQQRRAILHQRSRPLRPAAALDRVRRVSELRQQRD 610
R AVRLQQRRAILHQRSRPLRPAAALDRVRRVSELRQQRD
Sbjct: 124 RCTAVRLQQRRAILHQRSRPLRPAAALDRVRRVSELRQQRD 164
>UniRef50_P52167 Cluster: Transcription factor BCFI; n=3; Bombyx
mori|Rep: Transcription factor BCFI - Bombyx mori (Silk
moth)
Length = 508
Score = 102 bits (244), Expect = 9e-21
Identities = 58/126 (46%), Positives = 63/126 (50%)
Frame = +3
Query: 108 MDATMQTTKHEYQFEXXXXXXXXXXXXXXXXXXXRSYQELRPAHARDMQPYAHLDDALFK 287
MDATMQTTKHEYQFE AH+ DMQPY+HLDD+LFK
Sbjct: 1 MDATMQTTKHEYQFEGAAECGYPPGRTGLSPAA--QLPGAAAAHSLDMQPYSHLDDSLFK 58
Query: 288 PPTPGAASTDGVYLRRSPELXPSPERRDDYRPPAPLHYEXXXXXXXXXXXXXXXLEQGGG 467
PPTPG+A P P R RPPAPLHY+ LEQGGG
Sbjct: 59 PPTPGSAPPTASTCAGVPSSAPR-RRPRRLRPPAPLHYDDYAPPPPYSHDHHHHLEQGGG 117
Query: 468 GNGAAS 485
GNGAAS
Sbjct: 118 GNGAAS 123
Score = 78.6 bits (185), Expect = 1e-13
Identities = 39/41 (95%), Positives = 39/41 (95%)
Frame = +2
Query: 488 RVHAVRLQQRRAILHQRSRPLRPAAALDRVRRVSELRQQRD 610
R AVRLQQRRAILHQRSRPLRPAAALDRVRRVSELRQQRD
Sbjct: 124 RCTAVRLQQRRAILHQRSRPLRPAAALDRVRRVSELRQQRD 164
>UniRef50_Q9XIE0 Cluster: F23H11.22 protein; n=1; Arabidopsis
thaliana|Rep: F23H11.22 protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 929
Score = 37.1 bits (82), Expect = 0.38
Identities = 21/69 (30%), Positives = 30/69 (43%)
Frame = +3
Query: 459 GGGGNGAASSVYTRCAFNSAAPYFTNGADLSAQPQLWTASGGSPSYGSNAMLADEYAESA 638
GGGG G YT + + + P ++ + S + S GS YG ++
Sbjct: 163 GGGGGGGGGRYYTSSSASPSRPSSSSASAASPSRTSYATSAGS-DYGGGGGGKQSQSKFQ 221
Query: 639 AEGGGSLPS 665
A GGGS PS
Sbjct: 222 APGGGSFPS 230
>UniRef50_UPI0000EBE208 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 225
Score = 36.3 bits (80), Expect = 0.67
Identities = 24/68 (35%), Positives = 30/68 (44%)
Frame = +3
Query: 459 GGGGNGAASSVYTRCAFNSAAPYFTNGADLSAQPQLWTASGGSPSYGSNAMLADEYAESA 638
GG GA S+ A +A A +P W A GG S G L +E E A
Sbjct: 99 GGRPRGAPSARRRSLALPGSAASAGERAPGLGRPA-WDACGGRVSRGEEETLEEEKEEEA 157
Query: 639 AEGGGSLP 662
EGGG++P
Sbjct: 158 KEGGGAVP 165
>UniRef50_A0TSB4 Cluster: Putative uncharacterized protein; n=1;
Burkholderia cenocepacia MC0-3|Rep: Putative
uncharacterized protein - Burkholderia cenocepacia MC0-3
Length = 743
Score = 34.7 bits (76), Expect = 2.0
Identities = 22/43 (51%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +2
Query: 2 DSRATDRRERTLSATLCRLSRRPLSIA-PRSDHAV--RDGRHH 121
D+RATDRR R ++ T R RR A R D AV RD RHH
Sbjct: 315 DARATDRRHRLVAGTRARQGRRDGRHARGRDDDAVGDRDRRHH 357
>UniRef50_Q8AWA8 Cluster: Type I keratin 10; n=2; Lampetra
fluviatilis|Rep: Type I keratin 10 - Lampetra
fluviatilis (River lamprey)
Length = 531
Score = 34.3 bits (75), Expect = 2.7
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +3
Query: 459 GGGGNGAASSVYTRCAFNSAAPYFTNGADLSAQPQLWTASGGSPSYGSNA 608
GGGG G +S Y+ + +S+ GA T GGS SYGS +
Sbjct: 420 GGGGGGGSSGGYSYSSSSSSGGGGGGGASAGYSSSSSTGGGGSSSYGSKS 469
>UniRef50_Q2RRA4 Cluster: Putative uncharacterized protein; n=1;
Rhodospirillum rubrum ATCC 11170|Rep: Putative
uncharacterized protein - Rhodospirillum rubrum (strain
ATCC 11170 / NCIB 8255)
Length = 195
Score = 34.3 bits (75), Expect = 2.7
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +3
Query: 525 YFTNGADLSAQPQLWTASGGSPSYGSNAMLADEYAESAAEGGG 653
Y GA+L A+P++ T G P G + D AESAA G G
Sbjct: 61 YVFLGAELGARPEMGTPPGNPPVRGGGRVDFDRLAESAAFGRG 103
>UniRef50_A7CR68 Cluster: Putative uncharacterized protein
precursor; n=1; Opitutaceae bacterium TAV2|Rep: Putative
uncharacterized protein precursor - Opitutaceae
bacterium TAV2
Length = 209
Score = 34.3 bits (75), Expect = 2.7
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +3
Query: 522 PYFTNGADLSAQPQLWTASGGSPSYGSNAMLADEYAESAAEGGGSL 659
P FTN D P T GSP YGS+ +A + ++A +G L
Sbjct: 25 PSFTNTYDWVTVPNPLTMEDGSPFYGSDGYIAAVFVDTANQGNNVL 70
>UniRef50_A3C044 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 379
Score = 33.9 bits (74), Expect = 3.6
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 459 GGGGNGAASSVYTRCAFNSA-APYFTNGADLSAQPQLWTASGGSPSYGSNAMLADEYAES 635
GGGG G + + +F+S + +++ ++ + GGSP GSN A
Sbjct: 180 GGGGGGGDPRLKGQLSFSSRQGSVMSQISEMGSEDEELAGGGGSPEAGSNG----GGAAR 235
Query: 636 AAEGGGSLPS 665
GGGSLPS
Sbjct: 236 GGYGGGSLPS 245
>UniRef50_A5USN2 Cluster: Glycosyl transferase, group 1; n=3;
Chloroflexi (class)|Rep: Glycosyl transferase, group 1 -
Roseiflexus sp. RS-1
Length = 413
Score = 33.5 bits (73), Expect = 4.7
Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = +3
Query: 282 FKPPTP----GAASTDGVYLRRSPELXPSPERRDDYRPPA 389
F PP P GA DGV +RR P P P + Y PPA
Sbjct: 49 FSPPVPHYRTGADVVDGVPVRRFPITPPRPAPHEPYVPPA 88
>UniRef50_Q1DSF1 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 686
Score = 33.5 bits (73), Expect = 4.7
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 17 DRRERTLSA-TLCRLSRRPLSIAPRSDHAVRDGRHHA 124
D+R+RT A LCR S++ S A H VR GR HA
Sbjct: 9 DKRQRTAQACVLCRASKKRCSGAVPCGHCVRRGRAHA 45
>UniRef50_Q4QFL6 Cluster: Poly(A) polymerase, putative; n=6;
Trypanosomatidae|Rep: Poly(A) polymerase, putative -
Leishmania major
Length = 700
Score = 33.1 bits (72), Expect = 6.2
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +3
Query: 450 LEQGGGGNGAASSVYTRCAFNSAAPYFTNGADLSAQPQLWTASGGSPSYGSNAMLADEYA 629
L GG GNGAASS+ + + Y T+G A + + GS S + A+E A
Sbjct: 630 LHDGGAGNGAASSIDSYARKRTRDQYGTDGHGTVAAKAETSTAAGSGSGAAGRAQAEEDA 689
Query: 630 ESAAEGGG 653
+ + G
Sbjct: 690 DDIEQALG 697
>UniRef50_Q29R21 Cluster: RE09672p; n=3; Diptera|Rep: RE09672p -
Drosophila melanogaster (Fruit fly)
Length = 484
Score = 33.1 bits (72), Expect = 6.2
Identities = 23/67 (34%), Positives = 32/67 (47%)
Frame = +3
Query: 459 GGGGNGAASSVYTRCAFNSAAPYFTNGADLSAQPQLWTASGGSPSYGSNAMLADEYAESA 638
GG GN AAS A ++A +G + + T++GGS S G + + A A
Sbjct: 19 GGSGNCAASGSSNVAATAASAAANGSGGRVGGRQ---TSTGGSSSGGGGSKSEKQAAREA 75
Query: 639 AEGGGSL 659
GGGSL
Sbjct: 76 GGGGGSL 82
>UniRef50_A7I814 Cluster: Putative uncharacterized protein; n=1;
Candidatus Methanoregula boonei 6A8|Rep: Putative
uncharacterized protein - Methanoregula boonei (strain
6A8)
Length = 148
Score = 33.1 bits (72), Expect = 6.2
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 465 GGNGAASSVYTRCAFNSAAPY-FTNGADLSAQPQLWTASGGSPSYGSNAMLA 617
GG A S V N AAP + G+ ++A Q ASGG S G+NA LA
Sbjct: 69 GGQNAGSVVGINWTVNGAAPATWIGGSGVTAGMQNLPASGGILSIGANAYLA 120
>UniRef50_A1R8U8 Cluster: Putative integral membrane protein; n=1;
Arthrobacter aurescens TC1|Rep: Putative integral
membrane protein - Arthrobacter aurescens (strain TC1)
Length = 1415
Score = 32.7 bits (71), Expect = 8.2
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Frame = +3
Query: 219 QELRPAHARDMQ--PYAHLDDALFKPPTPGAASTDGVYLRR-----SPELXPSPERRDDY 377
Q++ A AR Q P + + PP P ++ VYL+R +P P P+ R +
Sbjct: 63 QDVNRAAARTAQQAPISSPPAPVSSPPAPVSSPPAPVYLQRPVQAPAPPAMPLPDVRSPF 122
Query: 378 RPPAP 392
RPP+P
Sbjct: 123 RPPSP 127
>UniRef50_Q8S673 Cluster: Putative uncharacterized protein
OSJNBa0034B05.20; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OSJNBa0034B05.20 - Oryza sativa subsp. japonica (Rice)
Length = 148
Score = 32.7 bits (71), Expect = 8.2
Identities = 20/42 (47%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -3
Query: 213 CAPPATARLR--PRGRSRTPPRLRIGIRVWWFAWWRPSRTAW 94
C P A RL P R P LR R+WW W R SRTAW
Sbjct: 49 CYPSALLRLSLSPPPSPRHPRALR---RIWW--WCRSSRTAW 85
>UniRef50_Q8L4H1 Cluster: P0696G06.23 protein; n=5; Oryza
sativa|Rep: P0696G06.23 protein - Oryza sativa subsp.
japonica (Rice)
Length = 563
Score = 32.7 bits (71), Expect = 8.2
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 462 GGGNGAASSVYTRCAFNSAAPYFTNGADLSAQPQLWTASGGSPSYGSNAMLA-DEYAESA 638
GGG G +V A + + Y T A +A+P+ + + SYG + DE S
Sbjct: 388 GGGGGRHVAVTATPARSVVSSYSTATATTAARPRATRPAKVASSYGGGGSIRDDESLTSC 447
Query: 639 AEGGGSLPSF 668
GG+LP++
Sbjct: 448 PAFGGALPNY 457
>UniRef50_Q6BZG0 Cluster: Transcription elongation factor SPT5; n=5;
Saccharomycetales|Rep: Transcription elongation factor
SPT5 - Debaryomyces hansenii (Yeast) (Torulaspora
hansenii)
Length = 967
Score = 32.7 bits (71), Expect = 8.2
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +3
Query: 462 GGGNGAASSVYTRCAFNSAA--PYFTNGADLSAQPQLWTASGGSPSYGSNAMLADEYAES 635
G GN S + +FN A P F++G S W + G +PS G A
Sbjct: 836 GPGNSNPSGNFGGASFNQPAKTPAFSSGGKSS-----WGSGGATPSVGGGATAWGSGGAQ 890
Query: 636 AAEGGGSLPSF 668
++ GGG P++
Sbjct: 891 SSWGGGKTPAY 901
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 425,003,806
Number of Sequences: 1657284
Number of extensions: 7067208
Number of successful extensions: 33728
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 31137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33634
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51239674196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -