Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8e06
         (661 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   2.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.9  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    23   2.9  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   9.0  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   9.0  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   9.0  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 477 STARY*STWLGTASFRKLLHGLLW 406
           S  RY + W GTA+ +  + GLL+
Sbjct: 111 SCTRYWTCWNGTATEQLCIGGLLY 134


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -1

Query: 103 VLVYKQIALNILCDKLYVYRAWELVFEFSDALTL 2
           V+ YK+    +LC  L  Y A  LV  FS+ L +
Sbjct: 123 VIDYKRHKKRLLCYLLARYVALALVILFSEILVI 156


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -1

Query: 103 VLVYKQIALNILCDKLYVYRAWELVFEFSDALTL 2
           V+ YK+    +LC  L  Y A  LV  FS+ L +
Sbjct: 141 VIDYKRHKKRLLCYLLARYVALALVILFSEILVI 174


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -3

Query: 311 CCHVSHQHG 285
           C HV H HG
Sbjct: 13  CLHVQHSHG 21


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +3

Query: 198 KYTRLSTDTKVKFPYAALSYINVTLCTYTAMLVGYM 305
           K+ + +TD   K  Y+A   I V L  +   ++ Y+
Sbjct: 132 KHYQSTTDLHKKIRYSAFGMIFVALLEHCFSMLNYV 167


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = -2

Query: 630 IWHIDNPCTR 601
           +WH++NP  R
Sbjct: 22  VWHVENPTYR 31


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,152
Number of Sequences: 336
Number of extensions: 3683
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)