Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8e01
(586 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 27 0.088
EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4 prot... 25 0.62
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 25 0.62
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 24 0.82
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 24 0.82
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 24 0.82
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 24 0.82
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 24 0.82
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 24 0.82
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 24 0.82
EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 23 1.9
DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory pro... 22 3.3
AY337337-2|AAP94193.1| 491|Tribolium castaneum cytochrome P450 ... 22 4.4
AF251548-1|AAF70178.1| 491|Tribolium castaneum cytochrome P450 ... 22 4.4
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 27.5 bits (58), Expect = 0.088
Identities = 21/56 (37%), Positives = 30/56 (53%)
Frame = +2
Query: 314 IIEAKPEPSEQTHSTVAVTKSGKKAQKATVCENLQANPAQTSSGTPSTSVVNNKSA 481
I E P P+ Q+ +T ++ SG + A PA TSSG+P+ SV +N SA
Sbjct: 6 IYEESPPPAPQSAAT-PISSSGMTSPAAA------PPPATTSSGSPA-SVASNASA 53
>EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4
protein.
Length = 475
Score = 24.6 bits (51), Expect = 0.62
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Frame = +2
Query: 83 STFL*KSKSYIFFKTKK-MSNWIGYAVSVNCGEPLGCYQGTILEADGNTLTLTKAFRNGF 259
+T + K ++ F + K +SN + YA S+N G G +I D ++ TK
Sbjct: 321 NTHMYKGDQWVAFDSPKAISNKVEYAKSLNLG---GVMIWSIETDDFRGVSGTK------ 371
Query: 260 PYPKLQVTLNAADIKDLKIIEAKPEPSEQTHSTVAVTKS 376
YP L+ +I+E P+P E+ + TK+
Sbjct: 372 -YPILKAIHQTLGGSSNEIVEPVPQPVEEVTQKPSSTKA 409
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.6 bits (51), Expect = 0.62
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +2
Query: 356 TVAVTKSGKKAQKATVCENLQANPAQTSSGTPSTSVVNNKSANRNTVQGPTRSKPIEI 529
+V+ + GK A +T +NL ++PA S T STS N N + S P +I
Sbjct: 148 SVSTSPPGKPAT-STTSQNL-SSPA---SSTSSTSSTEKAGTNNNNSKSSQSSNPPQI 200
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.2 bits (50), Expect = 0.82
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +2
Query: 356 TVAVTKSGKKAQKATVCENLQANPAQTSSGTPSTSVVNNKSANRNTVQGPTRSKPIEI 529
+V+ + GK A +T +NL ++PA S T STS N N + S P +I
Sbjct: 148 SVSTSPPGKPAT-STASQNL-SSPA---SSTSSTSSTEKAGTNNNNSKSGQSSNPPQI 200
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 24.2 bits (50), Expect = 0.82
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +2
Query: 356 TVAVTKSGKKAQKATVCENLQANPAQTSSGTPSTSVVNNKSANRNTVQGPTRSKPIEI 529
+V+ + GK A +T +NL ++PA S T STS N N + S P +I
Sbjct: 148 SVSTSPPGKPAT-STASQNL-SSPA---SSTSSTSSTEKAGTNNNNSKSGQSSNPPQI 200
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.2 bits (50), Expect = 0.82
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +2
Query: 356 TVAVTKSGKKAQKATVCENLQANPAQTSSGTPSTSVVNNKSANRNTVQGPTRSKPIEI 529
+V+ + GK A +T +NL ++PA S T STS N N + S P +I
Sbjct: 148 SVSTSPPGKPAT-STASQNL-SSPA---SSTSSTSSTEKAGTNNNNSKSGQSSNPPQI 200
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 24.2 bits (50), Expect = 0.82
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +2
Query: 356 TVAVTKSGKKAQKATVCENLQANPAQTSSGTPSTSVVNNKSANRNTVQGPTRSKPIEI 529
+V+ + GK A +T +NL ++PA S T STS N N + S P +I
Sbjct: 148 SVSTSPPGKPAT-STASQNL-SSPA---SSTSSTSSTEKAGTNNNNSKSGQSSNPPQI 200
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 24.2 bits (50), Expect = 0.82
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +2
Query: 356 TVAVTKSGKKAQKATVCENLQANPAQTSSGTPSTSVVNNKSANRNTVQGPTRSKPIEI 529
+V+ + GK A +T +NL ++PA S T STS N N + S P +I
Sbjct: 104 SVSTSPPGKPAT-STASQNL-SSPA---SSTSSTSSTEKAGTNNNNSKSGQSSNPPQI 156
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 24.2 bits (50), Expect = 0.82
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +2
Query: 356 TVAVTKSGKKAQKATVCENLQANPAQTSSGTPSTSVVNNKSANRNTVQGPTRSKPIEI 529
+V+ + GK A +T +NL ++PA S T STS N N + S P +I
Sbjct: 148 SVSTSPPGKPAT-STASQNL-SSPA---SSTSSTSSTEKAGTNNNNSKSGQSSNPPQI 200
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 24.2 bits (50), Expect = 0.82
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +2
Query: 356 TVAVTKSGKKAQKATVCENLQANPAQTSSGTPSTSVVNNKSANRNTVQGPTRSKPIEI 529
+V+ + GK A +T +NL ++PA S T STS N N + S P +I
Sbjct: 148 SVSTSPPGKPAT-STASQNL-SSPA---SSTSSTSSTEKAGTNNNNSKSGQSSNPPQI 200
>EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2
protein.
Length = 535
Score = 23.0 bits (47), Expect = 1.9
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -1
Query: 388 SFFATLSHCYCAV 350
SFF HCYC +
Sbjct: 417 SFFQQFFHCYCPI 429
>DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory
protein 6 protein.
Length = 251
Score = 22.2 bits (45), Expect = 3.3
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 326 KPEPSEQTHSTVAVTKSGKKAQKATVCENLQA 421
KP ++ T+ V VTK + ATV NLQA
Sbjct: 180 KPS-TKPTNKPVVVTKPPQAPPFATVGANLQA 210
>AY337337-2|AAP94193.1| 491|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 491
Score = 21.8 bits (44), Expect = 4.4
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = +3
Query: 396 QQFVRIYRPTLRRLVQEL 449
Q+F++I+ +RLV++L
Sbjct: 140 QEFIQIFNEETKRLVEDL 157
>AF251548-1|AAF70178.1| 491|Tribolium castaneum cytochrome P450
monooxigenase CYP4Q4 protein.
Length = 491
Score = 21.8 bits (44), Expect = 4.4
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = +3
Query: 396 QQFVRIYRPTLRRLVQEL 449
Q+F++I+ +RLV++L
Sbjct: 140 QEFIQIFNEETKRLVEDL 157
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,972
Number of Sequences: 336
Number of extensions: 2339
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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