Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8e01
         (586 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           28   0.19 
EF519477-2|ABP73564.1|  177|Anopheles gambiae CTL4 protein.            24   3.2  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   5.5  
L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.     23   9.6  

>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 28.3 bits (60), Expect = 0.19
 Identities = 12/53 (22%), Positives = 26/53 (49%)
 Frame = +2

Query: 329 PEPSEQTHSTVAVTKSGKKAQKATVCENLQANPAQTSSGTPSTSVVNNKSANR 487
           P P +Q H   + T +     + + C  + A P+++++     S+ +N S +R
Sbjct: 227 PHPQQQQHILGSPTSATNGVGEESGCPTIPAGPSKSATNHSINSIQSNDSGSR 279


>EF519477-2|ABP73564.1|  177|Anopheles gambiae CTL4 protein.
          Length = 177

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -1

Query: 547 IIPICLYLNGFAASW 503
           ++P C+Y+ G   SW
Sbjct: 147 VVPFCVYIQGSTMSW 161


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -1

Query: 388 SFFATLSHCYCAV 350
           SFF    HCYC V
Sbjct: 404 SFFQQFFHCYCPV 416


>L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.
          Length = 511

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +1

Query: 142 LDWIRGFGELWR 177
           L W+  FGE WR
Sbjct: 292 LRWLSNFGEAWR 303


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 527,464
Number of Sequences: 2352
Number of extensions: 10241
Number of successful extensions: 58
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55927431
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)