Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8e01
(586 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z69634-3|CAA93454.4| 553|Caenorhabditis elegans Hypothetical pr... 31 0.80
Z36753-7|CAA85339.1| 339|Caenorhabditis elegans Hypothetical pr... 30 1.1
U21308-1|AAB93314.3| 300|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 29 3.2
U39850-4|ABB51184.1| 672|Caenorhabditis elegans Polyq (poly glu... 29 3.2
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 29 3.2
AL132952-4|CAB61136.1| 185|Caenorhabditis elegans Hypothetical ... 28 4.2
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 28 4.2
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 28 4.2
AC024696-13|AAK84505.1| 346|Caenorhabditis elegans Hypothetical... 27 7.4
AC006697-3|AAF60392.1| 346|Caenorhabditis elegans Hypothetical ... 27 7.4
Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z81472-3|CAB03888.2| 468|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z78067-9|CAB01528.2| 450|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z66494-2|CAA91257.1| 821|Caenorhabditis elegans Hypothetical pr... 27 9.8
>Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical
protein C03D6.4 protein.
Length = 1390
Score = 39.9 bits (89), Expect = 0.001
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Frame = +2
Query: 296 DIKDLKIIEAKP---EPSEQTHSTVAVTKSGKKAQKATVCENLQANPAQTSSGTPSTSVV 466
D+K L+ KP PS+QT T T G+K + T+ +L +P+ + PS+S+
Sbjct: 426 DLKKLQFDSQKPISAPPSDQTPVTKPSTVFGQKPEAETLKSSLVGSPSSVQTPKPSSSLF 485
Query: 467 NNKSANRNTVQGP-TRSKP 520
N KS N T SKP
Sbjct: 486 NPKSIASNIETSQLTESKP 504
>Z69634-3|CAA93454.4| 553|Caenorhabditis elegans Hypothetical
protein B0001.5 protein.
Length = 553
Score = 30.7 bits (66), Expect = 0.80
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +2
Query: 338 SEQTHSTVAVTKSGKKAQKATVCENLQANPAQTSSGTPSTSVVNNKSANRNTVQGPTRSK 517
S + HST + T ++ ++ E P+QT P S + + A+ N GP R+K
Sbjct: 399 SHEGHSTSSPTAENRQCHRSRSPEQSNFRPSQT---VPGLSSMEQRKAHENVDWGPHRTK 455
Query: 518 PI 523
+
Sbjct: 456 NV 457
>Z36753-7|CAA85339.1| 339|Caenorhabditis elegans Hypothetical
protein T09A5.8 protein.
Length = 339
Score = 30.3 bits (65), Expect = 1.1
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +2
Query: 302 KDLKIIEAKPEPSEQTHSTVAVTKSGK-KAQKATVCENLQANPAQTSSGTPSTSVVNNKS 478
K LK+ + K E E + KS K K + TV ++ + + S GTP TS + KS
Sbjct: 74 KKLKVTD-KTELIELLQKQIKKNKSQKSKKRSKTVSDHESNHDSDGSYGTPKTSKKSKKS 132
Query: 479 ANRNT 493
A T
Sbjct: 133 AKNET 137
>U21308-1|AAB93314.3| 300|Caenorhabditis elegans Hypothetical
protein ZK1290.7 protein.
Length = 300
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -2
Query: 144 QLDIFFVLKNIYDFDFYKNVLINMYRDSNDNI 49
QLD+ + LK++ DFY ++ N++ D N+
Sbjct: 194 QLDLIYFLKDVLKQDFYYSIWFNIFFDELPNM 225
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 197 GTILEADGNTLTLTKAFRNGFPYPKLQVTLNAADIKD 307
G + + G+ +L A R G+P P + TLN DIKD
Sbjct: 4144 GVLTPSSGSKFSLPCAVR-GYPDPIISWTLNGNDIKD 4179
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 197 GTILEADGNTLTLTKAFRNGFPYPKLQVTLNAADIKD 307
G + + G+ +L A R G+P P + TLN DIKD
Sbjct: 4144 GVLTPSSGSKFSLPCAVR-GYPDPIISWTLNGNDIKD 4179
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 197 GTILEADGNTLTLTKAFRNGFPYPKLQVTLNAADIKD 307
G + + G+ +L A R G+P P + TLN DIKD
Sbjct: 4144 GVLTPSSGSKFSLPCAVR-GYPDPIISWTLNGNDIKD 4179
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 197 GTILEADGNTLTLTKAFRNGFPYPKLQVTLNAADIKD 307
G + + G+ +L A R G+P P + TLN DIKD
Sbjct: 4144 GVLTPSSGSKFSLPCAVR-GYPDPIISWTLNGNDIKD 4179
>U39850-4|ABB51184.1| 672|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform g
protein.
Length = 672
Score = 28.7 bits (61), Expect = 3.2
Identities = 19/80 (23%), Positives = 33/80 (41%)
Frame = +2
Query: 296 DIKDLKIIEAKPEPSEQTHSTVAVTKSGKKAQKATVCENLQANPAQTSSGTPSTSVVNNK 475
D++ + P P + S+ K+ QK + + A S + +
Sbjct: 82 DLEQAAVYVPTPIPKKDAKSS---ENRAKEKQKPMNFQKRPTSSASVDSNDDGVHIPAKR 138
Query: 476 SANRNTVQGPTRSKPIEIQA 535
A+ ++V GP+RSKP I A
Sbjct: 139 MAHASSVPGPSRSKPPMIGA 158
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 197 GTILEADGNTLTLTKAFRNGFPYPKLQVTLNAADIKD 307
G + + G+ +L A R G+P P + TLN DIKD
Sbjct: 4144 GVLTPSSGSKFSLPCAVR-GYPDPIISWTLNGNDIKD 4179
>AL132952-4|CAB61136.1| 185|Caenorhabditis elegans Hypothetical
protein Y51H4A.4 protein.
Length = 185
Score = 28.3 bits (60), Expect = 4.2
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 419 ANPAQTSSGTPSTSVVNNKSANRNTVQGPTRSK 517
ANP TSS +PS+S ++ ++++N G + SK
Sbjct: 58 ANPHATSSFSPSSSSTSSTTSSQNQQSGSSGSK 90
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 28.3 bits (60), Expect = 4.2
Identities = 26/93 (27%), Positives = 39/93 (41%)
Frame = +2
Query: 236 TKAFRNGFPYPKLQVTLNAADIKDLKIIEAKPEPSEQTHSTVAVTKSGKKAQKATVCENL 415
TKA F K ++ A+ + K + A E + Q V +TKSG K + ++
Sbjct: 363 TKAAMEEFGKLKEEIPPLVAEAHE-KNVAAMAEKTGQVDGAVGLTKSGLKPAEEAAGDSD 421
Query: 416 QANPAQTSSGTPSTSVVNNKSANRNTVQGPTRS 514
+ T+ PST+ KSA VQ S
Sbjct: 422 EKMDTNTNDDVPSTT--EAKSAIDKGVQAAAAS 452
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 28.3 bits (60), Expect = 4.2
Identities = 26/93 (27%), Positives = 39/93 (41%)
Frame = +2
Query: 236 TKAFRNGFPYPKLQVTLNAADIKDLKIIEAKPEPSEQTHSTVAVTKSGKKAQKATVCENL 415
TKA F K ++ A+ + K + A E + Q V +TKSG K + ++
Sbjct: 363 TKAAMEEFGKLKEEIPPLVAEAHE-KNVAAMAEKTGQVDGAVGLTKSGLKPAEEAAGDSD 421
Query: 416 QANPAQTSSGTPSTSVVNNKSANRNTVQGPTRS 514
+ T+ PST+ KSA VQ S
Sbjct: 422 EKMDTNTNDDVPSTT--EAKSAIDKGVQAAAAS 452
>AC024696-13|AAK84505.1| 346|Caenorhabditis elegans Hypothetical
protein F07B7.1 protein.
Length = 346
Score = 27.5 bits (58), Expect = 7.4
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 377 GKKAQKATVCENLQANPAQTSSGTPSTSVVNNKSANRNTVQGPTR 511
GKK +KATV N A+T+S T + V K + T + T+
Sbjct: 286 GKKPEKATVAGNNSNKRARTASPTAVKADVKPKDSKVETKRSKTQ 330
>AC006697-3|AAF60392.1| 346|Caenorhabditis elegans Hypothetical
protein W09B7.1 protein.
Length = 346
Score = 27.5 bits (58), Expect = 7.4
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 377 GKKAQKATVCENLQANPAQTSSGTPSTSVVNNKSANRNTVQGPTR 511
GKK +KATV N A+T+S T + V K + T + T+
Sbjct: 286 GKKPEKATVAGNNSNKRARTASPTAVKADVKPKDSKVETKRSKTQ 330
>Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical protein
F32H2.5 protein.
Length = 2586
Score = 27.1 bits (57), Expect = 9.8
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2
Query: 209 EADGNTLTLTKAFRNGFPYPKLQVTLNAADIKDLKIIEAKPEPSEQ 346
++D +T T A R P P+ V ++ D+K+ IE + SE+
Sbjct: 1441 QSDPALMTTTYAVRRVSPIPRDPVFIDVDDVKEFNWIEPLQKVSEE 1486
>Z81472-3|CAB03888.2| 468|Caenorhabditis elegans Hypothetical
protein C16D6.2 protein.
Length = 468
Score = 27.1 bits (57), Expect = 9.8
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -3
Query: 74 CIAIRMTIFNVLLNVVLNIYRRA 6
CIA+ T++N LL VLN+ RA
Sbjct: 300 CIAMTSTVWNPLLYAVLNLQLRA 322
>Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical
protein C04A11.3 protein.
Length = 1228
Score = 27.1 bits (57), Expect = 9.8
Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 4/88 (4%)
Frame = +2
Query: 242 AFRNGFPYPKLQVTLNAADIKDL--KIIEAKPEPSEQTHSTVAVTKSGKKAQKATVCENL 415
A +GF P + V + D K A P P E + +GK A+ ++ E
Sbjct: 352 ATSDGFKVPIVSVPIIETPPPDTPHKKRAAPPPPQEVNAHRQSPVVNGKPAENSSFAEFS 411
Query: 416 QANPAQTSSGTP--STSVVNNKSANRNT 493
+N +S GT ST N SA +T
Sbjct: 412 FSNSNTSSEGTAEFSTPSTNKSSAQLST 439
>Z78067-9|CAB01528.2| 450|Caenorhabditis elegans Hypothetical
protein ZC412.1 protein.
Length = 450
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = -1
Query: 565 GMVIIFIIPICLYLNGFAASWALYCIAISRF 473
G+++ ++P C + +SW+L IAI R+
Sbjct: 97 GIIMCKLVPTCQAFSVLISSWSLCYIAIDRY 127
>Z66494-2|CAA91257.1| 821|Caenorhabditis elegans Hypothetical
protein C34C6.2 protein.
Length = 821
Score = 27.1 bits (57), Expect = 9.8
Identities = 18/82 (21%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Frame = +2
Query: 281 TLNAADIKDLKIIEAKPEPSEQTHSTVAVTKSGKKAQKATVCENLQANPAQTSSGTPSTS 460
T+++ +D +I+ + +H TV+VT S + ++ E + S+ P T+
Sbjct: 521 TISSEIRRDQRIMSVNDRSRDPSHRTVSVTDSVNISNQSRYSEQTSSTLTYKSAPIPETA 580
Query: 461 VVNNKSAN-RNTVQGPTRSKPI 523
N + V T S P+
Sbjct: 581 NENGHGESISQLVSNSTVSAPV 602
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,468,196
Number of Sequences: 27780
Number of extensions: 217383
Number of successful extensions: 712
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 710
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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