Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8d23
         (662 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    26   0.32 
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    23   3.0  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   3.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.8  

>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 25.8 bits (54), Expect = 0.32
 Identities = 9/24 (37%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
 Frame = +3

Query: 282 SQANGIMCSNAVISFFSQW-RLWI 350
           +Q+ G++  N + SF+S W R+W+
Sbjct: 276 TQSPGVLGFNEICSFYSDWTRVWL 299


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = -1

Query: 536 LSIVNNVLSYLPNRYRHCKQHEATSNE 456
           LSIV N LSY  N Y    +    S E
Sbjct: 277 LSIVKNCLSYCFNLYHLASKSNQLSRE 303


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = -1

Query: 536 LSIVNNVLSYLPNRYRHCKQHEATSNE 456
           LSIV N LSY  N Y    +    S E
Sbjct: 277 LSIVKNCLSYCFNLYHLASKSNQLSRE 303


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +2

Query: 107 ILFKLYYILN*LLIFVLTIYHYRY 178
           I+F ++ +   +LI +L IY++ Y
Sbjct: 220 IIFTIHLLFYCVLIILLCIYYFYY 243


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 9/26 (34%), Positives = 11/26 (42%)
 Frame = +3

Query: 183  WVKNKTKTRIKITYNIAFVGLCSWCY 260
            W K        +TY I  V +C  CY
Sbjct: 1355 WQKIIIIVMSSVTYGIDTVAVCDACY 1380


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,567
Number of Sequences: 336
Number of extensions: 3120
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)