Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8d23
(662 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57202| Best HMM Match : DUF805 (HMM E-Value=4.9) 30 1.9
SB_52465| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_36582| Best HMM Match : Pox_A32 (HMM E-Value=0.067) 29 2.6
SB_25448| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_14410| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_46861| Best HMM Match : Neuralized (HMM E-Value=8.5) 29 3.4
SB_9661| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_3289| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_56169| Best HMM Match : DUF433 (HMM E-Value=1.8) 28 5.9
SB_51133| Best HMM Match : Pox_A32 (HMM E-Value=0.028) 28 5.9
SB_40264| Best HMM Match : DUF667 (HMM E-Value=0) 28 5.9
SB_38235| Best HMM Match : Pox_A32 (HMM E-Value=0.32) 28 5.9
SB_54588| Best HMM Match : Trp_dioxygenase (HMM E-Value=2.8) 28 7.8
SB_39665| Best HMM Match : Pox_A32 (HMM E-Value=0.023) 28 7.8
SB_10638| Best HMM Match : Myosin_N (HMM E-Value=1.5e-06) 28 7.8
SB_39182| Best HMM Match : Cellulase (HMM E-Value=0.00018) 28 7.8
SB_32990| Best HMM Match : Pox_A32 (HMM E-Value=0.023) 28 7.8
SB_32247| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_14272| Best HMM Match : Sugar_tr (HMM E-Value=0.0046) 28 7.8
>SB_57202| Best HMM Match : DUF805 (HMM E-Value=4.9)
Length = 170
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +2
Query: 47 SVNCIAITLYCVVNKCTFVIILFKLYYILN*LLIFVLTI 163
+V I IT ++ KCTF I K++Y+ +LI V+T+
Sbjct: 60 AVAAIQITERSIIPKCTFERIPSKVWYVCARVLITVITV 98
>SB_52465| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Frame = +3
Query: 492 ISIWQITQHIVHYTKPSLQKHIIRILWMVPIYA-LNALI---GLEFPEQSI--YLDSLR 650
IS+W ITQ + TKP + +++ P A + A++ G E PE+ + Y+ +L+
Sbjct: 118 ISVWVITQQLTSITKPFHENIAALVVFYTPSKADMKAILHDYGAELPEEKMKEYIKALK 176
>SB_36582| Best HMM Match : Pox_A32 (HMM E-Value=0.067)
Length = 367
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Frame = +3
Query: 492 ISIWQITQHIVHYTKPSLQKHIIRILWMVPIYA-LNALI---GLEFPEQSI--YLDSLR 650
IS+W ITQ + TKP + +++ P A + A++ G E PE+ + Y+ +L+
Sbjct: 118 ISVWVITQQLTSITKPFHENIAALVVFYTPSKADMKAILHDYGAELPEEKMKEYIKALK 176
>SB_25448| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 538
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Frame = +3
Query: 492 ISIWQITQHIVHYTKPSLQKHIIRILWMVPIYA-LNALI---GLEFPEQSI--YLDSLR 650
IS+W ITQ + TKP + + +++ P A + A++ G E E+ I Y+ +L+
Sbjct: 458 ISVWVITQQLTSITKPFRENIVALVVFYTPSKADMKAILHDNGAELSEEKIKEYMKALK 516
>SB_14410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 710
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Frame = +3
Query: 492 ISIWQITQHIVHYTKPSLQKHIIRILWMVPIYA-LNALI---GLEFPEQSI--YLDSLR 650
IS+W ITQ + TKP + + +++ P A + A++ G E E+ I Y+ +L+
Sbjct: 358 ISVWVITQQLTSITKPFRENIVALVVFYTPSKADMKAILHDNGAELSEEKIKEYMKALK 416
>SB_46861| Best HMM Match : Neuralized (HMM E-Value=8.5)
Length = 217
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Frame = +3
Query: 492 ISIWQITQHIVHYTKPSLQKHIIRILWMVPIYA-LNALI---GLEFPEQSI--YLDSLR 650
IS+W ITQ + TKPS + +++ P A + A++ G E E+ + Y+ +L+
Sbjct: 137 ISVWVITQQLTSITKPSRENIAALVVFYTPSKADMKAILHDYGAELSEEKMKEYMKALK 195
>SB_9661| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 511
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Frame = +3
Query: 492 ISIWQITQHIVHYTKPSLQKHIIRILWMVPIYA-LNALI---GLEFPEQSI--YLDSLR 650
IS+W ITQ + TKP + +++ P A + A++ G E E+ I Y+++L+
Sbjct: 262 ISVWVITQQLTSITKPFRENIAALVVFYTPSKADMKAILHDYGAELSEEEIKEYMEALK 320
>SB_3289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 500
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Frame = +3
Query: 492 ISIWQITQHIVHYTKPSLQKHIIRILWMVPIYA-LNALI---GLEFPEQSI--YLDSLR 650
IS+W ITQH+ TKP +++ P A + A++ G E E+ + Y+ +L+
Sbjct: 420 ISVWVITQHLTSITKPFRDNIAALVVFYTPSKADMKAILHDYGAEVSEEKMKEYMKALK 478
>SB_56169| Best HMM Match : DUF433 (HMM E-Value=1.8)
Length = 309
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +3
Query: 492 ISIWQITQHIVHYTKPSLQKHIIRILWMVPIYALNALIGLEFPEQSIYLDSLRE 653
IS+W ITQ + TKP + +++ P A + L Y +SL E
Sbjct: 97 ISVWVITQQLTSITKPFRENIAALVVFYTPSKAEHTCCTLGCMMSDEYFESLLE 150
>SB_51133| Best HMM Match : Pox_A32 (HMM E-Value=0.028)
Length = 1736
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Frame = +3
Query: 492 ISIWQITQHIVHYTKPSLQKHIIRILWMVPIYA-LNALI---GLEFPEQSI--YLDSLR 650
IS+W ITQ + TKP +K +++ P A + A++ G E E+ + Y+ +L+
Sbjct: 1224 ISVWVITQQLTSITKPFREKIASLVVFYTPSKAGMKAILHDYGAELSEEKMKEYMKALK 1282
>SB_40264| Best HMM Match : DUF667 (HMM E-Value=0)
Length = 2074
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Frame = +3
Query: 492 ISIWQITQHIVHYTKPSLQKHIIRILWMVPIYA-LNALI---GLEFPEQSI--YLDSLR 650
IS+W ITQ + TKP + +++ PI A + A + G E E+ + Y+ +L+
Sbjct: 1742 ISVWVITQQLASITKPFRENIAALVVFYTPIKADMKAFLHDYGAELSEEKMKEYMKALK 1800
>SB_38235| Best HMM Match : Pox_A32 (HMM E-Value=0.32)
Length = 651
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Frame = +3
Query: 492 ISIWQITQHIVHYTKPSLQKHIIRILWMVPIYA-LNALI---GLEFPEQSIYLDSLR 650
IS+W ITQ + TKP + +++ P A + A++ G E + Y+ +L+
Sbjct: 284 ISVWVITQQLTSITKPFRENIAALVVFYTPTKADMKAILHDYGAELEKMKEYMKALK 340
>SB_54588| Best HMM Match : Trp_dioxygenase (HMM E-Value=2.8)
Length = 372
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -1
Query: 527 VNNVLSYLPNRYRHCKQ 477
V NV++ L NRYRHC Q
Sbjct: 275 VKNVVNDLTNRYRHCLQ 291
>SB_39665| Best HMM Match : Pox_A32 (HMM E-Value=0.023)
Length = 1640
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Frame = +3
Query: 492 ISIWQITQHIVHYTKPSLQKHIIRILWMVPIYA-LNALI---GLEFPEQSI--YLDSLR 650
IS+W ITQ + TKP + +++ P A + A++ G E E+ I Y+ +L+
Sbjct: 1018 ISVWVITQQLTSITKPFRENIAALVVFYTPSKADMKAILHDYGAELSEEKIKEYMKALK 1076
>SB_10638| Best HMM Match : Myosin_N (HMM E-Value=1.5e-06)
Length = 1977
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/34 (32%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 14 TSDTSVRLQCQSVNCIAITLYCVVN-KCTFVIIL 112
TS SVR+ CQ V + ++ Y ++ +C +++I+
Sbjct: 1510 TSTLSVRIHCQCVYVVIVSGYTSIHCQCVYIVIV 1543
>SB_39182| Best HMM Match : Cellulase (HMM E-Value=0.00018)
Length = 949
Score = 27.9 bits (59), Expect = 7.8
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 374 CHSNCGASAYINSTFYKQWVQEI 442
C +NC S N+T Y +W +E+
Sbjct: 157 CGNNCSGSLRENTTKYNEWTKEV 179
Score = 27.9 bits (59), Expect = 7.8
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 374 CHSNCGASAYINSTFYKQWVQEI 442
C +NC S N+T Y +W +E+
Sbjct: 498 CGNNCSGSLRENTTKYNEWTKEV 520
Score = 27.9 bits (59), Expect = 7.8
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 374 CHSNCGASAYINSTFYKQWVQEI 442
C +NC S N+T Y +W +E+
Sbjct: 804 CGNNCSGSLRENTTKYNEWTKEV 826
>SB_32990| Best HMM Match : Pox_A32 (HMM E-Value=0.023)
Length = 594
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Frame = +3
Query: 492 ISIWQITQHIVHYTKPSLQKHIIRILWMVPIYA-LNALI---GLEFPEQSI--YLDSLR 650
IS+W ITQ + TKP + +++ P A + A++ G E E+ I Y+ +L+
Sbjct: 330 ISVWVITQQLTSITKPFRENIAALVVFYTPSKADMKAILHDYGAELSEEKIKEYMKALK 388
>SB_32247| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2209
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Frame = +3
Query: 492 ISIWQITQHIVHYTKPSLQKHIIRILWMVPIYA-LNALI---GLEFPEQSI--YLDSLR 650
IS+W +TQ + TKP + +++ PI A + A++ G E E+ + Y+ +L+
Sbjct: 1170 ISVWVMTQQLTSITKPFRENIAALVVFYTPIKADMKAILHDYGAELSEEKMKEYMKALK 1228
>SB_14272| Best HMM Match : Sugar_tr (HMM E-Value=0.0046)
Length = 775
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/53 (26%), Positives = 21/53 (39%)
Frame = +2
Query: 353 TCVHCSICHSNCGASAYINSTFYKQWVQEIRSGSTRWRWLRAACSAYIYLADN 511
TC ++C +NC AY F + + S A C+ Y Y D+
Sbjct: 167 TCPEDNVCCANCTTYAYEEGQFTSTVTEHVNSTCPEDNVCYANCTTYDYEEDH 219
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,331,930
Number of Sequences: 59808
Number of extensions: 350561
Number of successful extensions: 966
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 966
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1705624125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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