Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8d19
(732 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 268 2e-72
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 218 4e-57
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 207 8e-54
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 176 1e-44
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 115 5e-26
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 3e-15
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 49 4e-06
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 36 0.034
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 36 0.034
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.034
SB_8282| Best HMM Match : NHL (HMM E-Value=9.2e-23) 32 0.55
SB_16422| Best HMM Match : HMG_box (HMM E-Value=8.7e-26) 30 2.2
SB_41346| Best HMM Match : Ion_trans (HMM E-Value=0) 29 2.9
SB_27502| Best HMM Match : Seryl_tRNA_N (HMM E-Value=1.6) 29 2.9
SB_23556| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_20801| Best HMM Match : Sas10_Utp3 (HMM E-Value=0.46) 29 3.9
SB_42147| Best HMM Match : Thioredoxin (HMM E-Value=0.3) 29 5.1
SB_59805| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 268 bits (658), Expect = 2e-72
Identities = 126/149 (84%), Positives = 135/149 (90%)
Frame = +1
Query: 244 IGTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTT 423
+GTVIGIDLGTTYSCVGV+KNGRVEIIANDQGNRITPSYVAFT++GERLIGD AKNQLTT
Sbjct: 700 VGTVIGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTT 759
Query: 424 NPENTVFDAKRLIGREWSDQTVQHDVKFFPFKVVEKNSKPHVQVQTSQGDKVFAPEEISA 603
NPENTVFDAKRLIGR W D +VQ+D+KFFPFKVV+KN KPHVQV+ K FA EEISA
Sbjct: 760 NPENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISA 819
Query: 604 MVLTKMKETAEAYLGKKVTHAVVTVPCLF 690
MVLTKMKETAEAYLGKKVTHAVVTVP F
Sbjct: 820 MVLTKMKETAEAYLGKKVTHAVVTVPAYF 848
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +2
Query: 680 PAYFNDAQRQATKDAG 727
PAYFNDAQRQATKDAG
Sbjct: 845 PAYFNDAQRQATKDAG 860
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 218 bits (532), Expect = 4e-57
Identities = 103/145 (71%), Positives = 120/145 (82%)
Frame = +1
Query: 256 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPEN 435
IGIDLGTTYSCVGV++NG+VEIIANDQGNR TPSYV FT D ERL+GDAAKNQ+ NPEN
Sbjct: 7 IGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFT-DTERLVGDAAKNQVALNPEN 65
Query: 436 TVFDAKRLIGREWSDQTVQHDVKFFPFKVVEKNSKPHVQVQTSQGDKVFAPEEISAMVLT 615
T+FDAKRLIGR + D TVQ D+K +PFK++ N+KP +QV+ K FA EEIS+MVL
Sbjct: 66 TIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSMVLG 125
Query: 616 KMKETAEAYLGKKVTHAVVTVPCLF 690
KMKETAEAYLG+KVT AV+TVP F
Sbjct: 126 KMKETAEAYLGQKVTSAVITVPAYF 150
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 680 PAYFNDAQRQATKDAGT 730
PAYFND+QRQATKDAGT
Sbjct: 147 PAYFNDSQRQATKDAGT 163
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 207 bits (505), Expect = 8e-54
Identities = 100/145 (68%), Positives = 117/145 (80%)
Frame = +1
Query: 256 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPEN 435
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ D ERLIGDAAKNQ+ NPEN
Sbjct: 7 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFS-DTERLIGDAAKNQVAMNPEN 65
Query: 436 TVFDAKRLIGREWSDQTVQHDVKFFPFKVVEKNSKPHVQVQTSQGDKVFAPEEISAMVLT 615
TVFDAKRLIGR++ D V D+ +PF V+ + +P +QV+ K F PEEIS+MVLT
Sbjct: 66 TVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSMVLT 125
Query: 616 KMKETAEAYLGKKVTHAVVTVPCLF 690
KMKETAEAYLG KVT AVVTVP F
Sbjct: 126 KMKETAEAYLGAKVTDAVVTVPAYF 150
Score = 37.1 bits (82), Expect = 0.015
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +2
Query: 680 PAYFNDAQRQATKDAGT 730
PAYF+D+QRQATKDAGT
Sbjct: 147 PAYFHDSQRQATKDAGT 163
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 176 bits (429), Expect = 1e-44
Identities = 99/170 (58%), Positives = 118/170 (69%), Gaps = 25/170 (14%)
Frame = +1
Query: 256 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPEN 435
IGIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAFT D ERL+GDAAKNQ+ NP N
Sbjct: 7 IGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DEERLVGDAAKNQVAMNPTN 65
Query: 436 TVFDAKRLIGREWSDQTVQHDVKFFPFKVVEKNSKPHVQVQTS----------------- 564
T+FDAKRLIGR + D V+ D+K + F+VV + +P V+V+
Sbjct: 66 TIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVNEAGR 125
Query: 565 -------QGD-KVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPCLF 690
+G+ K F EEIS+MVL KMKETAEAYLG KVT AVVTVP F
Sbjct: 126 PKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYF 175
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +1
Query: 592 EISAMVLTKMKETAEAYLGKKVTHAVVTVPCLF 690
+IS+MVL KMKETAEAYLG KVT AVVTVP F
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYF 243
Score = 37.1 bits (82), Expect = 0.015
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 680 PAYFNDAQRQATKDAG 727
PAYFND+QRQATKDAG
Sbjct: 172 PAYFNDSQRQATKDAG 187
Score = 37.1 bits (82), Expect = 0.015
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 680 PAYFNDAQRQATKDAG 727
PAYFND+QRQATKDAG
Sbjct: 240 PAYFNDSQRQATKDAG 255
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 115 bits (276), Expect = 5e-26
Identities = 61/149 (40%), Positives = 90/149 (60%), Gaps = 3/149 (2%)
Frame = +1
Query: 253 VIGIDLGTTYSCVGVYK--NGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTN 426
+IGIDLGTTYSCVG Y+ +GR++I +++ +++ PS VAFT G L+G+ A +Q N
Sbjct: 33 IIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGV-LVGEKALSQAEIN 91
Query: 427 PENTVFDAKRLIGREWSDQTVQHDVKFFPFKV-VEKNSKPHVQVQTSQGDKVFAPEEISA 603
P+NT++DAKR IG+ ++ Q + K + F+V +K V V PEEI
Sbjct: 92 PKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGG 151
Query: 604 MVLTKMKETAEAYLGKKVTHAVVTVPCLF 690
V+ K++ AE L VT AV++VP F
Sbjct: 152 YVIKKLRTMAERNLTTTVTKAVMSVPAEF 180
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 79.4 bits (187), Expect = 3e-15
Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
Frame = +1
Query: 415 LTTNPENTVFDAKRLIGREWSDQTVQHDVKFFPFKVVE-KNSKPHVQVQTSQGDKVFAPE 591
+ +N +NT+ KR IGR++SD VQ ++ P+KVVE N +QVQ +VF+PE
Sbjct: 115 MISNLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPE 174
Query: 592 EISAMVLTKMKETAEAYLGKKVTHAVVTVPCLFQ*CSTSSNQRC 723
++ AM+ T++K TAE L KVT V++VP + T +RC
Sbjct: 175 QVMAMLFTRLKTTAEIALKTKVTDCVISVPSYY----TDRQRRC 214
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/55 (40%), Positives = 35/55 (63%)
Frame = +1
Query: 250 TVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQ 414
+V+G D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 2 SVVGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSL-GDKQRLIGTSGKNQ 55
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/48 (47%), Positives = 33/48 (68%)
Frame = +1
Query: 547 VQVQTSQGDKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPCLF 690
+ V+ + FAPE+ISA+VL ++K AEA+LG+ V AV+TVP F
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHF 49
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 680 PAYFNDAQRQATKDAGT 730
PA+FNDAQRQATKDAGT
Sbjct: 46 PAHFNDAQRQATKDAGT 62
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 35.9 bits (79), Expect = 0.034
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +1
Query: 304 NGRVEIIANDQGNRITPSYVAFTQDGERLI 393
+G IIAND G+R+TP+ VAF+ D E+LI
Sbjct: 82 DGNTTIIANDAGDRVTPAMVAFS-DTEKLI 110
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 35.9 bits (79), Expect = 0.034
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +1
Query: 316 EIIANDQGNRITPSYVAFTQDGERL 390
++I N +G+R TPS VAFT +GERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 35.9 bits (79), Expect = 0.034
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +1
Query: 526 EKNSKPHVQVQTSQGDKVFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPCLF 690
+K PHV+ Q D F PEE+ M+L + E + + V+TVP F
Sbjct: 63 KKLDNPHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFF 116
>SB_8282| Best HMM Match : NHL (HMM E-Value=9.2e-23)
Length = 877
Score = 31.9 bits (69), Expect = 0.55
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 289 VGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPENTVFDA 450
V Y N +V + A D G+++T Y A T +G+ L+ A + +T N + V A
Sbjct: 728 VSDYHNRKVHVFARDDGSQVT-CYTAVTDEGDGLLN--APSGITVNSKGEVIVA 778
>SB_16422| Best HMM Match : HMG_box (HMM E-Value=8.7e-26)
Length = 245
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 4/55 (7%)
Frame = +1
Query: 424 NPENTVFDAKRLIGREWSDQTVQHDVKFF----PFKVVEKNSKPHVQVQTSQGDK 576
NP+ FD R +G EW T + +F K K PH + Q + DK
Sbjct: 41 NPQMHNFDISRKLGLEWQKLTEEEKAYYFEEAKKLKEEHKERYPHYKYQPRKRDK 95
>SB_41346| Best HMM Match : Ion_trans (HMM E-Value=0)
Length = 1264
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -2
Query: 491 CTVWSLHSRPIRRLASKTVFSGLVVSWFLAASPI 390
C VW + +RRL VF G+++ + +AAS I
Sbjct: 387 CAVWKVMRYKVRRLVEHKVFEGIIL-FLIAASSI 419
>SB_27502| Best HMM Match : Seryl_tRNA_N (HMM E-Value=1.6)
Length = 163
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +1
Query: 448 AKRLIGREWSDQTVQHDVKFFPFKVVEKNSKPHVQVQTSQGDKVFAPEEISAMVLTKMKE 627
A+RL +E ++++V + ++ K KP +K+ PE S++V TK+ E
Sbjct: 60 AERLNMKEKTEKSVNAQLTELVNNLIFKAEKPDEAEMKESMEKIIRPENCSSLVATKLDE 119
>SB_23556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 671
Score = 29.1 bits (62), Expect = 3.9
Identities = 24/78 (30%), Positives = 37/78 (47%)
Frame = +1
Query: 430 ENTVFDAKRLIGREWSDQTVQHDVKFFPFKVVEKNSKPHVQVQTSQGDKVFAPEEISAMV 609
++T F A R I + + Q V HD+K P + N ++T + K+ +S+
Sbjct: 196 DSTGFAAMRCIAQAYVMQGVSHDMKTKPEITRKLNLVTLCCLETERPTKL-----VSSPS 250
Query: 610 LTKMKETAEAYLGKKVTH 663
L KM+ TA L K TH
Sbjct: 251 LKKMEFTARLTLNWKFTH 268
>SB_20801| Best HMM Match : Sas10_Utp3 (HMM E-Value=0.46)
Length = 521
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +1
Query: 448 AKRLIGREWSDQTVQHDVKFFPFKVVEKNSKPHVQVQTSQGDKVFAPEEISAMVLTKMKE 627
A+RL +E ++++V + ++ K KP +K+ PE S++V TK+ E
Sbjct: 276 AERLNMKEKTEKSVDAQLADLVNNLIFKAEKPDEAEMKESMEKIIRPENCSSLVATKVDE 335
>SB_42147| Best HMM Match : Thioredoxin (HMM E-Value=0.3)
Length = 787
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -2
Query: 473 HSRPIRRLASKTVFSGLVVSWF 408
H I RL+S+ VFSG V+ WF
Sbjct: 114 HKILIDRLSSRFVFSGTVIQWF 135
>SB_59805| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 446
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/42 (28%), Positives = 26/42 (61%)
Frame = -3
Query: 154 KIYRLKNSEINKNLNKIIFTATLRSL*NAFIKHLRIQTVHRY 29
+++ ++ +++ +++ ++ A LR L N FIK R+ VH Y
Sbjct: 169 RLFEMEATDLFRDIQELPRNAALRKL-NDFIKRARLAKVHAY 209
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,540,444
Number of Sequences: 59808
Number of extensions: 426978
Number of successful extensions: 974
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 966
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1962001171
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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