Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8d18
         (301 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RI83 Cluster: CCAAT-box DNA binding protein subunit B...    33   1.7  
UniRef50_A7QT02 Cluster: Chromosome chr14 scaffold_164, whole ge...    32   2.2  
UniRef50_Q95LV6 Cluster: Putative uncharacterized protein; n=4; ...    32   2.9  
UniRef50_Q92DF9 Cluster: Lin0854 protein; n=15; Bacillales|Rep: ...    31   3.8  
UniRef50_Q057H8 Cluster: Alanyl-tRNA synthetase; n=1; Buchnera a...    31   6.7  
UniRef50_A5E1U6 Cluster: Putative uncharacterized protein; n=1; ...    31   6.7  
UniRef50_UPI0000F1DB1A Cluster: PREDICTED: similar to C type lec...    30   8.9  
UniRef50_Q1ZTS4 Cluster: Putative transcriptional regulator; n=1...    30   8.9  
UniRef50_Q4YR63 Cluster: Putative uncharacterized protein; n=1; ...    30   8.9  
UniRef50_A0E227 Cluster: Chromosome undetermined scaffold_74, wh...    30   8.9  

>UniRef50_Q7RI83 Cluster: CCAAT-box DNA binding protein subunit B;
           n=3; Plasmodium (Vinckeia)|Rep: CCAAT-box DNA binding
           protein subunit B - Plasmodium yoelii yoelii
          Length = 1264

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
 Frame = +2

Query: 137 MKEKKKNNIQLKTLSNHLILNH--SKECLNTES*K*NKTVL*ILYVLLNKLFRLK 295
           + + +KN + +    +HL  N+  SKE +N E  K  KT + I +VLLNKL +L+
Sbjct: 255 LSDNEKNILTIINEHSHLYNNNAMSKEEINKEFLKCYKTSININFVLLNKLIKLE 309


>UniRef50_A7QT02 Cluster: Chromosome chr14 scaffold_164, whole
           genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr14 scaffold_164, whole genome shotgun
           sequence - Vitis vinifera (Grape)
          Length = 706

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = +2

Query: 44  GITV*ILQGGIAS*IHKSSILNCSVINPCLRMKEKKKNNIQLKTLSNH 187
           G  +  L GG+++ + KS+    S ++  +R+  KKK N Q KT   H
Sbjct: 62  GFMIDFLMGGVSAAVSKSAAAQLSDLSSPIRIMAKKKANNQDKTTQQH 109


>UniRef50_Q95LV6 Cluster: Putative uncharacterized protein; n=4;
           Catarrhini|Rep: Putative uncharacterized protein -
           Macaca fascicularis (Crab eating macaque) (Cynomolgus
           monkey)
          Length = 531

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +2

Query: 113 SVINP-CLRMKEKKKNNIQLKTLSNHLILNHSKE 211
           +++NP CL MKEKK    Q++ ++ H    H K+
Sbjct: 324 TILNPKCLTMKEKKSPISQIRKINRHFTTKHKKK 357


>UniRef50_Q92DF9 Cluster: Lin0854 protein; n=15; Bacillales|Rep:
           Lin0854 protein - Listeria innocua
          Length = 277

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = -3

Query: 293 LIEIIYSIAHTISTIQFYFIFKTQYLNILWND*VS-NDSTKFLIVYCFFFFLSYA 132
           L  ++  ++ +I+T+ F F+F  ++ N+LW+  V+ +D T  L V     F  YA
Sbjct: 186 LFRVVLPMSKSITTVIFLFLFTDRWTNLLWDMLVTKSDGTVTLNVLISQMFGPYA 240


>UniRef50_Q057H8 Cluster: Alanyl-tRNA synthetase; n=1; Buchnera
           aphidicola str. Cc (Cinara cedri)|Rep: Alanyl-tRNA
           synthetase - Buchnera aphidicola subsp. Cinara cedri
          Length = 881

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
 Frame = +2

Query: 59  ILQGGIAS*IHKSSILNC-SVINPCLRMKEKKKNNIQLKTLSNHLILNHSKECLNTES 229
           ILQ  + S  H ++ +     I   +++K KKKNN+ LK +S+H+    +  CL  E+
Sbjct: 246 ILQN-VKSIFHTNNFIQLIEAIKKKIKIKIKKKNNVSLKIISDHI---RTSTCLIAEN 299


>UniRef50_A5E1U6 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 652

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = +2

Query: 101 ILNCSVINPCLRMKEKKKNNIQLKTLSNHLILNHSKEC 214
           +L C  +N   R   K+K +I L +LSNH+ +N +++C
Sbjct: 580 LLECVRVN---RKLGKEKADIYLSSLSNHIAINEARKC 614


>UniRef50_UPI0000F1DB1A Cluster: PREDICTED: similar to C type lectin
           receptor B; n=2; Danio rerio|Rep: PREDICTED: similar to
           C type lectin receptor B - Danio rerio
          Length = 225

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = +2

Query: 2   CRPA*DMQAKLSCIGITV*ILQGGIAS*IH-KSSILNCSVINPCLRMKEKKKNNIQLKTL 178
           C+P   MQ KLSC+     +  GG+A   H K+    C     CL  K      +++ ++
Sbjct: 28  CKP---MQRKLSCLLFLSLLANGGLAYLYHNKNPNPFCEQRRICL--KSDAHQTMKINSM 82

Query: 179 SNHLILNH 202
            NH + NH
Sbjct: 83  KNHSLPNH 90


>UniRef50_Q1ZTS4 Cluster: Putative transcriptional regulator; n=1;
           Vibrio angustum S14|Rep: Putative transcriptional
           regulator - Vibrio angustum S14
          Length = 353

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = +2

Query: 89  HKSSILNCSVINPCLRMKEKKKNNIQLKTLSNHLILNHSKECLN 220
           H S++LN S+      + E K +NI L  LSN  I  HS E L+
Sbjct: 97  HYSALLNSSIR---FHLDENKGDNINLWLLSNEPIAKHSTESLS 137


>UniRef50_Q4YR63 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 339

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
 Frame = +2

Query: 137 MKEKKKNNIQLKTLSNHLILNH--SKECLNTES*K*NKTVL*ILYVLLNKLFRLK 295
           + + +KN + +    +H+  N+  SKE +N E  K  KT +   ++LLNKL +L+
Sbjct: 229 LSDNEKNILTIINEHSHMYNNNAMSKEDINNEFLKCYKTSINTNFILLNKLIKLE 283


>UniRef50_A0E227 Cluster: Chromosome undetermined scaffold_74, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_74,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 479

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = -3

Query: 296 FLIEIIYSIAHTISTIQFYFIFKTQYLNILWND*VSNDSTKFLIVYCFFFFL 141
           +LI +I  + +      FY  F+ Q  NI+ +  + N  +K  + Y  FF L
Sbjct: 258 YLINMILGLIYCFVFYAFYVTFENQINNIIKHSTIMNIDSKRYVFYISFFLL 309


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 258,645,578
Number of Sequences: 1657284
Number of extensions: 4215475
Number of successful extensions: 11566
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11559
length of database: 575,637,011
effective HSP length: 76
effective length of database: 449,683,427
effective search space used: 10342718821
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)