Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8d11
         (706 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   3.2  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   3.2  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   5.6  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    22   5.6  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 424 CLNVYLYTFYVNYEY 468
           CL  Y Y FY++Y Y
Sbjct: 81  CLPFYSYFFYLSYIY 95


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 424 CLNVYLYTFYVNYEY 468
           CL  Y Y FY++Y Y
Sbjct: 37  CLPFYSYFFYLSYIY 51


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2

Query: 156 YVLDAIRLSLFYYTTIYN 103
           YV D    S+FYY   YN
Sbjct: 427 YVRDPDDCSIFYYCLAYN 444


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = -2

Query: 120 YTTIYNHDSSNFIQFGNTYTCRPCYFGPFHPHFK 19
           Y+ + N DS N     N+YT +     PF  + K
Sbjct: 43  YSPVSNSDSENSEVSSNSYTPKIKSCRPFKAYIK 76


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,081
Number of Sequences: 336
Number of extensions: 3525
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)