Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8d11
         (706 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L41642-1|AAA85085.1|  773|Drosophila melanogaster lin19 protein ...    51   1e-06
BT010290-1|AAQ23608.1|  774|Drosophila melanogaster LD20253p pro...    51   1e-06
AF136343-1|AAD33676.1|  774|Drosophila melanogaster Cul-1 protein.     51   1e-06
AE013599-533|AAM68872.1|  774|Drosophila melanogaster CG1877-PD,...    51   1e-06
AE013599-532|AAM68871.1|  774|Drosophila melanogaster CG1877-PC,...    51   1e-06
AE013599-531|AAF59175.1|  774|Drosophila melanogaster CG1877-PB,...    51   1e-06
AE013599-530|AAF59174.1|  774|Drosophila melanogaster CG1877-PA,...    51   1e-06

>L41642-1|AAA85085.1|  773|Drosophila melanogaster lin19 protein
           protein.
          Length = 773

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
 Frame = +2

Query: 470 SNANRPQVPLRQKDFDQIWGDLQEGIEQXYKKQYMVKR-RYIDLYTHVYNYCTSVHHHSA 646
           + +   Q   +  + D IW +L EGI Q ++ +  + R +Y+  YTHVY+YCTSV    +
Sbjct: 2   NRSGNSQTTQKLVNLDDIWSELVEGIMQVFEHEKSLTRSQYMRFYTHVYDYCTSVSAAPS 61

Query: 647 GSSSRVPQNNIGRVSYTGKK 706
           G SS       G     GKK
Sbjct: 62  GRSS----GKTGGAQLVGKK 77


>BT010290-1|AAQ23608.1|  774|Drosophila melanogaster LD20253p
           protein.
          Length = 774

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
 Frame = +2

Query: 470 SNANRPQVPLRQKDFDQIWGDLQEGIEQXYKKQYMVKR-RYIDLYTHVYNYCTSVHHHSA 646
           + +   Q   +  + D IW +L EGI Q ++ +  + R +Y+  YTHVY+YCTSV    +
Sbjct: 2   NRSGNSQTTQKLVNLDDIWSELVEGIMQVFEHEKSLTRSQYMRFYTHVYDYCTSVSAAPS 61

Query: 647 GSSSRVPQNNIGRVSYTGKK 706
           G SS       G     GKK
Sbjct: 62  GRSS----GKTGGAQLVGKK 77


>AF136343-1|AAD33676.1|  774|Drosophila melanogaster Cul-1 protein.
          Length = 774

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
 Frame = +2

Query: 470 SNANRPQVPLRQKDFDQIWGDLQEGIEQXYKKQYMVKR-RYIDLYTHVYNYCTSVHHHSA 646
           + +   Q   +  + D IW +L EGI Q ++ +  + R +Y+  YTHVY+YCTSV    +
Sbjct: 2   NRSGNSQTTQKLVNLDDIWSELVEGIMQVFEHEKSLTRSQYMRFYTHVYDYCTSVSAAPS 61

Query: 647 GSSSRVPQNNIGRVSYTGKK 706
           G SS       G     GKK
Sbjct: 62  GRSS----GKTGGAQLVGKK 77


>AE013599-533|AAM68872.1|  774|Drosophila melanogaster CG1877-PD,
           isoform D protein.
          Length = 774

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
 Frame = +2

Query: 470 SNANRPQVPLRQKDFDQIWGDLQEGIEQXYKKQYMVKR-RYIDLYTHVYNYCTSVHHHSA 646
           + +   Q   +  + D IW +L EGI Q ++ +  + R +Y+  YTHVY+YCTSV    +
Sbjct: 2   NRSGNSQTTQKLVNLDDIWSELVEGIMQVFEHEKSLTRSQYMRFYTHVYDYCTSVSAAPS 61

Query: 647 GSSSRVPQNNIGRVSYTGKK 706
           G SS       G     GKK
Sbjct: 62  GRSS----GKTGGAQLVGKK 77


>AE013599-532|AAM68871.1|  774|Drosophila melanogaster CG1877-PC,
           isoform C protein.
          Length = 774

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
 Frame = +2

Query: 470 SNANRPQVPLRQKDFDQIWGDLQEGIEQXYKKQYMVKR-RYIDLYTHVYNYCTSVHHHSA 646
           + +   Q   +  + D IW +L EGI Q ++ +  + R +Y+  YTHVY+YCTSV    +
Sbjct: 2   NRSGNSQTTQKLVNLDDIWSELVEGIMQVFEHEKSLTRSQYMRFYTHVYDYCTSVSAAPS 61

Query: 647 GSSSRVPQNNIGRVSYTGKK 706
           G SS       G     GKK
Sbjct: 62  GRSS----GKTGGAQLVGKK 77


>AE013599-531|AAF59175.1|  774|Drosophila melanogaster CG1877-PB,
           isoform B protein.
          Length = 774

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
 Frame = +2

Query: 470 SNANRPQVPLRQKDFDQIWGDLQEGIEQXYKKQYMVKR-RYIDLYTHVYNYCTSVHHHSA 646
           + +   Q   +  + D IW +L EGI Q ++ +  + R +Y+  YTHVY+YCTSV    +
Sbjct: 2   NRSGNSQTTQKLVNLDDIWSELVEGIMQVFEHEKSLTRSQYMRFYTHVYDYCTSVSAAPS 61

Query: 647 GSSSRVPQNNIGRVSYTGKK 706
           G SS       G     GKK
Sbjct: 62  GRSS----GKTGGAQLVGKK 77


>AE013599-530|AAF59174.1|  774|Drosophila melanogaster CG1877-PA,
           isoform A protein.
          Length = 774

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
 Frame = +2

Query: 470 SNANRPQVPLRQKDFDQIWGDLQEGIEQXYKKQYMVKR-RYIDLYTHVYNYCTSVHHHSA 646
           + +   Q   +  + D IW +L EGI Q ++ +  + R +Y+  YTHVY+YCTSV    +
Sbjct: 2   NRSGNSQTTQKLVNLDDIWSELVEGIMQVFEHEKSLTRSQYMRFYTHVYDYCTSVSAAPS 61

Query: 647 GSSSRVPQNNIGRVSYTGKK 706
           G SS       G     GKK
Sbjct: 62  GRSS----GKTGGAQLVGKK 77


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,787,239
Number of Sequences: 53049
Number of extensions: 561268
Number of successful extensions: 1496
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1489
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)