Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8d09
         (348 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       21   2.7  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   4.8  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   4.8  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   4.8  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   4.8  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   4.8  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      20   6.3  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    20   6.3  

>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.4 bits (43), Expect = 2.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 192 HLHHQRLLYPNFPREILRTR 133
           H  HQ ++Y N PR+  R R
Sbjct: 44  HPIHQTVIYHNNPRDPNRAR 63


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
 Frame = -1

Query: 207 LPKPIHLHHQRLLYP--NFPREILRTRHPLLANQ 112
           LP P H HHQ    P    P +I    +PL  NQ
Sbjct: 735 LPPPPHPHHQPPRNPVGTNPHDI---NNPLSVNQ 765


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
 Frame = -1

Query: 207 LPKPIHLHHQRLLYP--NFPREILRTRHPLLANQ 112
           LP P H HHQ    P    P +I    +PL  NQ
Sbjct: 627 LPPPPHPHHQPPRNPVGTNPHDI---NNPLSVNQ 657


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 21  TCILFILLH*VIFPYFNN 74
           T  LFI+   VI PYF N
Sbjct: 174 TYSLFIVFMTVILPYFIN 191


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 182 ISVFCTPIFRGKFFELVILF*QTKVYFL 99
           IS+F      G F E V++F    V+F+
Sbjct: 122 ISIFVNLAILGVFGEFVLVFVPDYVFFV 149


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 21  TCILFILLH*VIFPYFNN 74
           T  LFI+   VI PYF N
Sbjct: 174 TYSLFIVFMTVILPYFIN 191


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -1

Query: 216 PSCLPKPI 193
           P C+PKPI
Sbjct: 53  PGCVPKPI 60


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +3

Query: 36  ILLH*VIFPYFNNHHSVMADKQKVD 110
           I++H ++ P   NH  V A+   +D
Sbjct: 257 IMMHHLVNPQSLNHQEVKAECSDLD 281


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,534
Number of Sequences: 336
Number of extensions: 1144
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6876025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)