Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8d09
(348 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_53810| Best HMM Match : DUF1542 (HMM E-Value=3.9) 32 0.11
SB_58341| Best HMM Match : Ribosomal_60s (HMM E-Value=8.4) 30 0.59
SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061) 29 0.78
SB_5821| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_4644| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_61| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_36312| Best HMM Match : Ion_trans (HMM E-Value=0) 28 1.8
SB_53354| Best HMM Match : zf-CCHC (HMM E-Value=0.72) 28 2.4
SB_25796| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.2
SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10) 27 3.2
SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.) 24 3.9
SB_19076| Best HMM Match : HECT (HMM E-Value=0) 27 4.2
SB_1298| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.2
SB_31013| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.2
SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.2
SB_33208| Best HMM Match : Pepsin-I3 (HMM E-Value=4.7) 27 5.5
SB_46386| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.5
SB_10105| Best HMM Match : zf-C4 (HMM E-Value=3.60001e-40) 27 5.5
SB_7686| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.5
SB_50057| Best HMM Match : NACHT (HMM E-Value=1.4e-08) 26 7.3
SB_49462| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.3
SB_49174| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.3
SB_45284| Best HMM Match : Nucleoplasmin (HMM E-Value=8.7e-10) 26 7.3
SB_30268| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.3
SB_27310| Best HMM Match : CUB (HMM E-Value=9.7e-17) 26 7.3
SB_26646| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.3
SB_6006| Best HMM Match : Annexin (HMM E-Value=2.4e-25) 26 7.3
SB_42540| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.3
SB_35600| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.3
SB_32046| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.3
SB_29711| Best HMM Match : Peptidase_C1 (HMM E-Value=6.9e-06) 26 7.3
SB_23796| Best HMM Match : p450 (HMM E-Value=1.3e-19) 26 7.3
SB_59429| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.7
SB_57710| Best HMM Match : bZIP_1 (HMM E-Value=0.32) 26 9.7
SB_56816| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.7
SB_52295| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.7
SB_47646| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.7
SB_38913| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.7
SB_28346| Best HMM Match : BOP1NT (HMM E-Value=8.2e-14) 26 9.7
SB_48699| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.7
SB_41784| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.7
SB_33294| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.7
SB_31219| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.7
SB_2507| Best HMM Match : DUF1168 (HMM E-Value=1.6) 26 9.7
SB_346| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.7
>SB_53810| Best HMM Match : DUF1542 (HMM E-Value=3.9)
Length = 560
Score = 32.3 bits (70), Expect = 0.11
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +3
Query: 153 AENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKD 281
A+++ DADDED+++ +D+ +DD I D + + + D
Sbjct: 290 ADDYVNSDADDEDINIGDDDADDDDIYGDDDDDINSDDDAADD 332
Score = 31.9 bits (69), Expect = 0.15
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 153 AENWGTEDADDEDVSVWEDNWEDDVIQDDFN 245
A+++ DADDED++ +D +DD I D+N
Sbjct: 164 ADDYVNSDADDEDINSDDDAADDDNINGDYN 194
Score = 31.1 bits (67), Expect = 0.26
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 165 GTEDADDEDVSVWEDNWEDDVIQDD 239
G +DADDED+++ +D+ DD I D
Sbjct: 397 GDDDADDEDINIGDDDAADDDIYGD 421
Score = 26.6 bits (56), Expect = 5.5
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 165 GTEDADDEDVSVWEDNWEDDVIQDD 239
G DADDED++ +D +DD+ DD
Sbjct: 60 GDYDADDEDINGGDD--DDDIYGDD 82
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 165 GTEDADDEDVSVWEDNWEDDVIQDD 239
G +ADDED++ +D +DD+ +DD
Sbjct: 191 GDYNADDEDINGGDD--DDDIYRDD 213
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 165 GTEDADDEDVSVWEDNWEDDVIQDD 239
G +ADDED++ +D +DD+ +DD
Sbjct: 337 GDYNADDEDINGGDD--DDDIYRDD 359
>SB_58341| Best HMM Match : Ribosomal_60s (HMM E-Value=8.4)
Length = 153
Score = 29.9 bits (64), Expect = 0.59
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +3
Query: 171 EDADDEDVSVWEDNWEDDVIQDDFN 245
+D DD++V +D+ EDDV+ DD++
Sbjct: 70 DDNDDDEVDDDDDDVEDDVLDDDYD 94
>SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061)
Length = 2735
Score = 29.5 bits (63), Expect = 0.78
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 165 GTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQL 266
GTED + ED ED+ DD D N++ ++Q+
Sbjct: 1675 GTEDVEKEDTKKKEDDKADDESNDKGNRRRKRQI 1708
>SB_5821| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 562
Score = 28.7 bits (61), Expect = 1.4
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +3
Query: 165 GTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKDQKS 290
GTEDA E +SV ++ + Q Q++ +Q ++LKD +S
Sbjct: 487 GTEDAKSETLSVQDEELQGLQQQHALLQKMLEQQQQLKDLQS 528
>SB_4644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 63
Score = 28.7 bits (61), Expect = 1.4
Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Frame = +3
Query: 156 ENWGTEDADDEDVSVWEDN--WEDDVIQDD 239
E G ED DD+D S ED+ + DDVI DD
Sbjct: 16 EYHGDEDDDDDDKSSKEDDEIYCDDVIDDD 45
>SB_61| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 123
Score = 28.7 bits (61), Expect = 1.4
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 171 EDADDEDVSVWEDNWEDDVIQDD 239
+D DD+D V +D+ +DDV+ DD
Sbjct: 13 DDDDDDDDDVDDDDDDDDVVDDD 35
>SB_36312| Best HMM Match : Ion_trans (HMM E-Value=0)
Length = 1283
Score = 28.3 bits (60), Expect = 1.8
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 156 ENWGTEDADDEDVSVWEDNWEDDVIQDD 239
+ W ED DD+ W+D+ ED+ +D+
Sbjct: 1113 DKWEGEDEDDDIKESWDDDDEDEKKEDE 1140
>SB_53354| Best HMM Match : zf-CCHC (HMM E-Value=0.72)
Length = 298
Score = 27.9 bits (59), Expect = 2.4
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +3
Query: 180 DDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKD 281
D+ED +V ++ Q D ++Q++Q+L+KLKD
Sbjct: 6 DEEDGAVAPSATKNSQTQCDPDEQIQQRLQKLKD 39
>SB_25796| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 123
Score = 27.5 bits (58), Expect = 3.2
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 171 EDADDEDVSVWEDNWEDDVIQDD 239
+D DD+DV + +D+ +DDV DD
Sbjct: 76 DDVDDDDVDIGDDD-DDDVNDDD 97
>SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10)
Length = 2478
Score = 27.5 bits (58), Expect = 3.2
Identities = 10/40 (25%), Positives = 27/40 (67%)
Frame = +3
Query: 171 EDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKDQKS 290
E+ D+E+ + E+++++D+ DD L ++ E++ ++K+
Sbjct: 1836 EEEDEEEDEIEEEDYDEDIGDDD--DDLEEEAEEVAERKA 1873
>SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 7645
Score = 24.2 bits (50), Expect(2) = 3.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 204 EDNWEDDVIQDDFNQQLRQQLEKLKDQK 287
EDN +DDV DD + R +K K+ K
Sbjct: 7437 EDNDDDDVSDDDVSGDNRSGGKKNKESK 7464
Score = 21.0 bits (42), Expect(2) = 3.9
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3
Query: 168 TEDADDEDVS 197
TED DD+DVS
Sbjct: 7436 TEDNDDDDVS 7445
>SB_19076| Best HMM Match : HECT (HMM E-Value=0)
Length = 2018
Score = 27.1 bits (57), Expect = 4.2
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 165 GTEDADDEDVSVWEDNWEDD 224
G+ED +DED S +D ++DD
Sbjct: 1312 GSEDIEDEDCSRRDDEYDDD 1331
>SB_1298| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1668
Score = 27.1 bits (57), Expect = 4.2
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = +3
Query: 171 EDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKDQKS 290
ED +++ W+ ++D I+D FN++ + + K QK+
Sbjct: 1147 EDKFNKEHKAWKPVYKDTYIEDKFNKEHKAWMHKSDYQKN 1186
>SB_31013| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 27.1 bits (57), Expect = 4.2
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 180 DDEDVSVWEDNWEDDVIQDDFNQQLRQQLE 269
DDE +V D+ DDVI DD N + ++ E
Sbjct: 31 DDESKNVMNDH--DDVIDDDVNDETQEDKE 58
>SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1512
Score = 27.1 bits (57), Expect = 4.2
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 180 DDEDVSVWEDNWEDDVIQDDFNQQLRQQLE 269
DDE V D+ DDVI DD N + +++ E
Sbjct: 1258 DDESKDVMNDH--DDVIDDDVNDETQEEEE 1285
Score = 26.2 bits (55), Expect = 7.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 180 DDEDVSVWEDNWEDDVIQDDFNQQLRQQLE 269
DDE V D+ DDVI DD N + ++ E
Sbjct: 1323 DDESKDVMNDH--DDVIDDDVNDETQEDEE 1350
>SB_33208| Best HMM Match : Pepsin-I3 (HMM E-Value=4.7)
Length = 256
Score = 26.6 bits (56), Expect = 5.5
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 156 ENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQ 263
+N G +D+D + + N +DD +DD N + +Q
Sbjct: 211 DNGGDGGGNDDDDDIGDGNDDDDEDKDDNNSPVNEQ 246
>SB_46386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 849
Score = 26.6 bits (56), Expect = 5.5
Identities = 12/30 (40%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = +3
Query: 156 ENWGTEDAD-DEDVSVWEDNWEDDVIQDDF 242
E +G +D+D D+DV+ ++N +DD + DD+
Sbjct: 397 EGYGDDDSDIDDDVN--DNNDDDDYMMDDY 424
>SB_10105| Best HMM Match : zf-C4 (HMM E-Value=3.60001e-40)
Length = 370
Score = 26.6 bits (56), Expect = 5.5
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = -1
Query: 171 LYPNFPREILRTRHPLLANQGLLSVCQPLHCDD 73
L+P+ RHPLLAN+ P C D
Sbjct: 316 LFPHSSGSSNYCRHPLLANKSRAETRNPFSCQD 348
>SB_7686| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 82
Score = 26.6 bits (56), Expect = 5.5
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +3
Query: 165 GTEDADDEDVSVWEDNWEDDVIQDD 239
G +D DD+D V +D+ +D+ + DD
Sbjct: 46 GDDDDDDDDEDVDDDDDDDEDVDDD 70
>SB_50057| Best HMM Match : NACHT (HMM E-Value=1.4e-08)
Length = 1555
Score = 26.2 bits (55), Expect = 7.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 180 DDEDVSVWEDNWEDDVIQDDFNQQLRQQLE 269
DDE V D+ DDVI DD N + ++ E
Sbjct: 1350 DDESKDVMNDH--DDVIDDDVNDETQEDEE 1377
>SB_49462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 659
Score = 26.2 bits (55), Expect = 7.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 180 DDEDVSVWEDNWEDDVIQDDFNQQLRQQLE 269
DDE V D+ DDVI DD N + ++ E
Sbjct: 550 DDESKDVMNDH--DDVIDDDVNDETQEDEE 577
>SB_49174| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 209
Score = 26.2 bits (55), Expect = 7.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 180 DDEDVSVWEDNWEDDVIQDDFNQQLRQQLE 269
DDE V D+ DDVI DD N + ++ E
Sbjct: 108 DDESKDVMNDH--DDVIDDDVNDETQEDEE 135
>SB_45284| Best HMM Match : Nucleoplasmin (HMM E-Value=8.7e-10)
Length = 282
Score = 26.2 bits (55), Expect = 7.3
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +3
Query: 171 EDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKL--KDQK 287
ED DDED ED+ E+D +D+ + L + + + KD+K
Sbjct: 209 EDDDDEDDEEEEDSDEEDESEDEVAEALTAKKKAVTPKDKK 249
>SB_30268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 26.2 bits (55), Expect = 7.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 171 EDADDEDVSVWEDNWEDDVIQDDFNQQ 251
+D DD+DV +DN DD D FN +
Sbjct: 5 DDGDDDDVHDNDDNDGDDHNDDAFNDK 31
>SB_27310| Best HMM Match : CUB (HMM E-Value=9.7e-17)
Length = 761
Score = 26.2 bits (55), Expect = 7.3
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -2
Query: 230 DDVVFP-VVFPNRYIFIISVFCTPIFRGKFFELVILF*QTKVYFLFV 93
D VVF VV+P ++F++ F IF F ++ +F +F+FV
Sbjct: 681 DSVVFAFVVYPYFFLFVVFAFVVFIFIFFFAFVIFVF---NAFFVFV 724
>SB_26646| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 26.2 bits (55), Expect = 7.3
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 171 EDADDEDVSVWEDNWEDDVIQDD 239
+D DD+D + +D+ +DD QDD
Sbjct: 123 DDDDDDDAAAADDDDDDDEDQDD 145
>SB_6006| Best HMM Match : Annexin (HMM E-Value=2.4e-25)
Length = 803
Score = 26.2 bits (55), Expect = 7.3
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 171 EDADDEDVSVWEDNWEDDVIQDDFN 245
+D DD+D +DN +DD DDF+
Sbjct: 497 DDGDDDDDDDDDDNDDDDDDDDDFH 521
>SB_42540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1471
Score = 26.2 bits (55), Expect = 7.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 180 DDEDVSVWEDNWEDDVIQDDFNQQLRQQLE 269
DDE V D+ DDVI DD N + ++ E
Sbjct: 36 DDESKDVMNDH--DDVIDDDVNDETQEDEE 63
>SB_35600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 305
Score = 26.2 bits (55), Expect = 7.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 180 DDEDVSVWEDNWEDDVIQDDFNQQLRQQLE 269
DDE V D+ DDVI DD N + ++ E
Sbjct: 207 DDESKDVMNDH--DDVIDDDVNDETQEDEE 234
>SB_32046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1570
Score = 26.2 bits (55), Expect = 7.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 180 DDEDVSVWEDNWEDDVIQDDFNQQLRQQLE 269
DDE V D+ DDVI DD N + ++ E
Sbjct: 279 DDESKDVMNDH--DDVIDDDVNDETQEDEE 306
>SB_29711| Best HMM Match : Peptidase_C1 (HMM E-Value=6.9e-06)
Length = 385
Score = 26.2 bits (55), Expect = 7.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 180 DDEDVSVWEDNWEDDVIQDDFNQQLRQQLE 269
DDE V D+ DDVI DD N + ++ E
Sbjct: 108 DDESKDVMNDH--DDVIDDDVNDETQEDEE 135
>SB_23796| Best HMM Match : p450 (HMM E-Value=1.3e-19)
Length = 461
Score = 26.2 bits (55), Expect = 7.3
Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -1
Query: 153 REILRTRHP-LLANQGLLSVCQPLHCD 76
RE +R R +L N L SVCQPL CD
Sbjct: 385 RESMRARSSDILGN--LKSVCQPLFCD 409
>SB_59429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 97
Score = 25.8 bits (54), Expect = 9.7
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3
Query: 168 TEDADDEDVSVWEDNWEDDVI 230
T+D+DD+D ED+ +DD+I
Sbjct: 36 TDDSDDDDADHNEDDNDDDMI 56
>SB_57710| Best HMM Match : bZIP_1 (HMM E-Value=0.32)
Length = 584
Score = 25.8 bits (54), Expect = 9.7
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +3
Query: 231 QDDFNQQLRQQLEKLKDQK 287
+D +N+QL + LE LK+Q+
Sbjct: 32 RDQYNRQLNEALESLKEQR 50
>SB_56816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1200
Score = 25.8 bits (54), Expect = 9.7
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 171 EDADDEDVSVWEDNWEDDVIQDD 239
+D DD+DV +D+ +DD + DD
Sbjct: 1009 DDDDDDDVDDDDDDDDDDDVDDD 1031
>SB_52295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 171 EDADDEDVSVWEDNWEDDVIQDDFNQQLRQQ 263
+D DD D + +D+ +DD+ DD + L +Q
Sbjct: 1282 DDDDDVDDDIDDDDDDDDMDDDDDDDLLNEQ 1312
>SB_47646| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 174 DADDEDVSVWEDNWEDDVIQDDFN 245
D D+ D + EDN DD I +D N
Sbjct: 11 DDDEHDDEIKEDNKNDDDIDEDSN 34
>SB_38913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 63
Score = 25.8 bits (54), Expect = 9.7
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 156 ENWGTEDADDEDVSVWEDNWEDDVIQDDFN 245
EN +D DD+D + +D+ +DD +DD N
Sbjct: 12 ENDDNDDDDDDDDNDDDDDEDDDDDEDDNN 41
>SB_28346| Best HMM Match : BOP1NT (HMM E-Value=8.2e-14)
Length = 258
Score = 25.8 bits (54), Expect = 9.7
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Frame = +3
Query: 174 DADDEDVSVWEDNWEDDVIQDDFNQQLRQ---QLEKLKDQK 287
+ DD+DV EDN E+D DD N+ ++ + +K DQK
Sbjct: 56 EEDDDDVEEDEDNIEED-DDDDANKDSKENNIEHDKNDDQK 95
>SB_48699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 85
Score = 25.8 bits (54), Expect = 9.7
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 171 EDADDEDVSVWEDNWEDDVIQDD 239
+D DD+D +V +D+ +DD DD
Sbjct: 16 DDDDDDDDNVHDDDEDDDDYDDD 38
>SB_41784| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 171 EDADDEDVSVWEDNWEDDVIQDDFN 245
+DADD+D +D+ +DD DDF+
Sbjct: 37 DDADDDDDDDDDDDDDDDDDDDDFD 61
>SB_33294| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 983
Score = 25.8 bits (54), Expect = 9.7
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 207 DNWEDDVIQDDFNQQLRQQLEK 272
+NW+ + IQ QQ RQQL++
Sbjct: 788 NNWQQEGIQTQQQQQERQQLQR 809
>SB_31219| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 517
Score = 25.8 bits (54), Expect = 9.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 186 EDVSVWEDNWEDDVIQDDFNQQLRQQL 266
+DV EDN +DDV DD Q++ L
Sbjct: 118 DDVGADEDNDDDDVHNDDDASQVKSAL 144
>SB_2507| Best HMM Match : DUF1168 (HMM E-Value=1.6)
Length = 305
Score = 25.8 bits (54), Expect = 9.7
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +3
Query: 183 DEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLK 278
D++ + D+ D +QDDF+ +R++ E K
Sbjct: 268 DDNFDNYNDDKVGDEVQDDFDDPIREEREAQK 299
>SB_346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 652
Score = 25.8 bits (54), Expect = 9.7
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +3
Query: 183 DEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLK 278
D++ + D+ D +QDDF+ +R++ E K
Sbjct: 228 DDNFDNYNDDKVGDEVQDDFDDPIREEREAQK 259
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,131,777
Number of Sequences: 59808
Number of extensions: 146396
Number of successful extensions: 1744
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1588
length of database: 16,821,457
effective HSP length: 73
effective length of database: 12,455,473
effective search space used: 523129866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -