Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8d07
(417 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41658 Cluster: Late expression factor 5; n=13; Nucleop... 124 7e-28
UniRef50_Q0GYC3 Cluster: Putative uncharacterized protein; n=2; ... 108 5e-23
UniRef50_Q77K58 Cluster: Lef5; n=4; Nucleopolyhedrovirus|Rep: Le... 69 3e-11
UniRef50_O10344 Cluster: Late expression factor 5; n=8; Nucleopo... 62 4e-09
UniRef50_Q0IL15 Cluster: Lef-5; n=5; Nucleopolyhedrovirus|Rep: L... 60 1e-08
UniRef50_P41727 Cluster: Late expression factor 5 homolog; n=10;... 55 7e-07
UniRef50_P24649 Cluster: DNA-binding protein; n=6; Nucleopolyhed... 39 0.048
UniRef50_UPI0000F1D641 Cluster: PREDICTED: similar to tenascin-R... 36 0.34
UniRef50_Q7RCT6 Cluster: Putative transcription factor; n=2; Pla... 35 0.78
UniRef50_A5FRF5 Cluster: Putative uncharacterized protein; n=3; ... 33 3.1
UniRef50_Q15ZB0 Cluster: NUDIX hydrolase; n=1; Pseudoalteromonas... 32 4.1
UniRef50_Q8JKL2 Cluster: Copine-like protein T2I1.10; n=1; Helio... 32 5.5
UniRef50_UPI00015B40B1 Cluster: PREDICTED: similar to attractin;... 31 9.6
UniRef50_UPI000150AA00 Cluster: transcription factor S-II; n=1; ... 31 9.6
UniRef50_Q73T79 Cluster: Putative uncharacterized protein; n=2; ... 31 9.6
UniRef50_Q52085 Cluster: Gp64 precursor; n=1; Polysphondylium pa... 31 9.6
>UniRef50_P41658 Cluster: Late expression factor 5; n=13;
Nucleopolyhedrovirus|Rep: Late expression factor 5 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 265
Score = 124 bits (299), Expect = 7e-28
Identities = 56/58 (96%), Positives = 57/58 (98%)
Frame = -3
Query: 412 NDKVIYLQNSNKNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASFLRYCRXCGMSGC 239
NDKVIYLQNSNKNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASF+RYCR CGMSGC
Sbjct: 208 NDKVIYLQNSNKNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASFIRYCRLCGMSGC 265
>UniRef50_Q0GYC3 Cluster: Putative uncharacterized protein; n=2;
Nucleopolyhedrovirus|Rep: Putative uncharacterized
protein - Plutella xylostella multiple
nucleopolyhedrovirus
Length = 74
Score = 108 bits (259), Expect = 5e-23
Identities = 48/66 (72%), Positives = 50/66 (75%)
Frame = -1
Query: 201 MNGSXIFCMCEVYPGGVCNPSFCVCV*YRLKNGAGVSNHMWHRXKNDDGDDXPCLNCVIY 22
MNGS IFCMC VYPGGVCNPSFC CV SNHMW+R KN DGDD PCLNCVIY
Sbjct: 1 MNGSWIFCMCGVYPGGVCNPSFCACV----------SNHMWYRLKNGDGDDKPCLNCVIY 50
Query: 21 VAVVFT 4
VAV+FT
Sbjct: 51 VAVIFT 56
>UniRef50_Q77K58 Cluster: Lef5; n=4; Nucleopolyhedrovirus|Rep: Lef5
- Helicoverpa armigera NPV
Length = 315
Score = 69.3 bits (162), Expect = 3e-11
Identities = 27/47 (57%), Positives = 39/47 (82%)
Frame = -3
Query: 394 LQNSNKNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASFLRYCRXC 254
+ +S K KL+ ++G+SL++C+H FVTVE QTRAGDEI SF++YC+ C
Sbjct: 260 INSSLKYKLYSINGMSLRACQHSFVTVEKQTRAGDEIVSFIKYCQIC 306
>UniRef50_O10344 Cluster: Late expression factor 5; n=8;
Nucleopolyhedrovirus|Rep: Late expression factor 5 -
Orgyia pseudotsugata multicapsid polyhedrosis virus
(OpMNPV)
Length = 263
Score = 62.1 bits (144), Expect = 4e-09
Identities = 31/60 (51%), Positives = 37/60 (61%), Gaps = 5/60 (8%)
Frame = -3
Query: 412 NDKVIYLQNSN-----KNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASFLRYCRXCGM 248
+D+VIYL N N + L SG SL C H + TVE QTRAGDE+ SF+RYC C M
Sbjct: 202 SDRVIYLHNKNDVLDERTLLHGPSGTSLAPCLHRYATVERQTRAGDEMVSFIRYCELCQM 261
>UniRef50_Q0IL15 Cluster: Lef-5; n=5; Nucleopolyhedrovirus|Rep:
Lef-5 - Leucania separata nuclear polyhedrosis virus
(LsNPV)
Length = 302
Score = 60.5 bits (140), Expect = 1e-08
Identities = 23/46 (50%), Positives = 35/46 (76%)
Frame = -3
Query: 385 SNKNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASFLRYCRXCGM 248
++ ++L +SG+SL C+H+FV VE Q RAGDE SF+R+C+ CG+
Sbjct: 251 ADADRLHPMSGMSLNLCKHEFVVVERQLRAGDEAVSFIRHCKRCGL 296
>UniRef50_P41727 Cluster: Late expression factor 5 homolog; n=10;
Granulovirus|Rep: Late expression factor 5 homolog -
Cryptophlebia leucotreta granulosis virus (ClGV)
(Cryptophlebialeucotreta granulovirus)
Length = 240
Score = 54.8 bits (126), Expect = 7e-07
Identities = 21/45 (46%), Positives = 33/45 (73%)
Frame = -3
Query: 385 SNKNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASFLRYCRXCG 251
S+++ L L+G ++ SC HD+V E Q RAGDE+ SF+++C+ CG
Sbjct: 194 SSQSSLSNLNGYTIASCVHDYVIEEHQLRAGDEMVSFIKFCKKCG 238
>UniRef50_P24649 Cluster: DNA-binding protein; n=6;
Nucleopolyhedrovirus|Rep: DNA-binding protein - Bombyx
mori nuclear polyhedrosis virus (BmNPV)
Length = 65
Score = 38.7 bits (86), Expect = 0.048
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +3
Query: 42 MXYRRRRRSSTGATYGLT 95
M YRRRRRSSTGATYGLT
Sbjct: 1 MVYRRRRRSSTGATYGLT 18
>UniRef50_UPI0000F1D641 Cluster: PREDICTED: similar to tenascin-R;
n=1; Danio rerio|Rep: PREDICTED: similar to tenascin-R -
Danio rerio
Length = 618
Score = 35.9 bits (79), Expect = 0.34
Identities = 17/38 (44%), Positives = 18/38 (47%)
Frame = -1
Query: 240 VNSSVFCNXGGLSMNGSXIFCMCEVYPGGVCNPSFCVC 127
VN S C G L + S IFC GVC FCVC
Sbjct: 272 VNGSCQCRSGFLGEDCSLIFCANNCSQRGVCKEGFCVC 309
>UniRef50_Q7RCT6 Cluster: Putative transcription factor; n=2;
Plasmodium (Vinckeia)|Rep: Putative transcription factor
- Plasmodium yoelii yoelii
Length = 383
Score = 34.7 bits (76), Expect = 0.78
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -3
Query: 409 DKVIYLQNSNKNKLFELSGLSLKSCRHDFVT-VESQTRAGDEIASFLRYCRXC 254
DK + L +N + ++ C HDF+ V QTR+ DE ++ + YC C
Sbjct: 323 DKNVELFKEGENGAYNITYEKCTDCDHDFLYFVNIQTRSADEGSTIIYYCPNC 375
>UniRef50_A5FRF5 Cluster: Putative uncharacterized protein; n=3;
Dehalococcoides|Rep: Putative uncharacterized protein -
Dehalococcoides sp. BAV1
Length = 193
Score = 32.7 bits (71), Expect = 3.1
Identities = 21/64 (32%), Positives = 31/64 (48%)
Frame = -1
Query: 285 SLRSFATVGXVECXAVNSSVFCNXGGLSMNGSXIFCMCEVYPGGVCNPSFCVCV*YRLKN 106
+L +F + VE AV ++ C GL + + C Y +CN C CV YRLK+
Sbjct: 101 TLENFKPISRVEAMAVITT--CQQAGLMT--TLVHCKEHFY--SICNCCRCCCVPYRLKH 154
Query: 105 GAGV 94
G+
Sbjct: 155 QYGI 158
>UniRef50_Q15ZB0 Cluster: NUDIX hydrolase; n=1; Pseudoalteromonas
atlantica T6c|Rep: NUDIX hydrolase - Pseudoalteromonas
atlantica (strain T6c / BAA-1087)
Length = 271
Score = 32.3 bits (70), Expect = 4.1
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = -3
Query: 412 NDKVIYLQNSNKNKLFELSGLSLKSCR----HDFVTVESQTRAGDEIASFLRYCRXCGMS 245
N +V YL + N+L E +GL L R HD + + S ++A FLR R CG
Sbjct: 58 NGQVCYLVDMG-NELIEQAGLQLSHLRSLLLHDEMDIFSVAARAWQVALFLRTHRFCGQC 116
Query: 244 G 242
G
Sbjct: 117 G 117
>UniRef50_Q8JKL2 Cluster: Copine-like protein T2I1.10; n=1;
Heliothis zea virus 1|Rep: Copine-like protein T2I1.10 -
Heliothis zea virus 1
Length = 241
Score = 31.9 bits (69), Expect = 5.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 337 CRHDFVTVESQTRAGDEIASFLRYCRXC 254
C H F T+E QTR+GDE + C C
Sbjct: 165 CDHVFKTIEQQTRSGDEEITVSNICIKC 192
>UniRef50_UPI00015B40B1 Cluster: PREDICTED: similar to attractin;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
attractin - Nasonia vitripennis
Length = 1305
Score = 31.1 bits (67), Expect = 9.6
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = -1
Query: 249 CXAVNSSVFCNXGGLSMNGSXIFCMCEV-YPGGVCNPSFCV--CV*YRLKNGAGVSNHMW 79
C + +S V C+ G+ + G C C+ + G C+ C C +R G G NH W
Sbjct: 237 CPSRDSQVDCSDHGVCIEG---VCTCDATWMGEACDVPVCPNNCSAHR---GQGECNHEW 290
Query: 78 HR 73
HR
Sbjct: 291 HR 292
>UniRef50_UPI000150AA00 Cluster: transcription factor S-II; n=1;
Tetrahymena thermophila SB210|Rep: transcription factor
S-II - Tetrahymena thermophila SB210
Length = 356
Score = 31.1 bits (67), Expect = 9.6
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = -3
Query: 397 YLQNSNKNKLFELSGLSLKSCRHD--FVTVESQTRAGDEIASFLRYCRXCGMS 245
+ N + +L L G K C+ F+ E QTR+ DE + C CG S
Sbjct: 301 FYNNMRRQRLQGLEGELCKGCKKKTAFLVKELQTRSSDEPMTRFMECNSCGKS 353
>UniRef50_Q73T79 Cluster: Putative uncharacterized protein; n=2;
Mycobacterium avium|Rep: Putative uncharacterized
protein - Mycobacterium paratuberculosis
Length = 201
Score = 31.1 bits (67), Expect = 9.6
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +1
Query: 133 AEARVTDAARV--DLAHTEDPGAVH*QAAXVTEH-ATINSXTFHTSDSSEG 276
A TD AR+ D TEDPGA AA VT H A + + +D S+G
Sbjct: 37 AATLTTDEARLLDDAGFTEDPGAYAEIAADVTAHMARLYGTAYSAADVSKG 87
>UniRef50_Q52085 Cluster: Gp64 precursor; n=1; Polysphondylium
pallidum|Rep: Gp64 precursor - Polysphondylium pallidum
(Cellular slime mold)
Length = 320
Score = 31.1 bits (67), Expect = 9.6
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = -1
Query: 249 CXAVNSSVFCNXG-GLSMNGSXIFCMCEVYPGGVCNPS 139
C A NS V C G G + NG+ + C + G CN S
Sbjct: 123 CGASNSRVGCKAGEGCAFNGTALVCSPFIANGAACNTS 160
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 312,228,098
Number of Sequences: 1657284
Number of extensions: 5054777
Number of successful extensions: 11355
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 11145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11354
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 19465676618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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