Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8d06
(553 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g57860.1 68414.m06565 60S ribosomal protein L21 similar to 60... 181 2e-46
At1g57660.1 68414.m06543 60S ribosomal protein L21 (RPL21E) simi... 181 2e-46
At1g09690.1 68414.m01088 60S ribosomal protein L21 (RPL21C) Simi... 180 4e-46
At1g09590.1 68414.m01076 60S ribosomal protein L21 (RPL21A) Simi... 180 4e-46
At5g05890.1 68418.m00649 UDP-glucoronosyl/UDP-glucosyl transfera... 31 0.39
At5g05900.1 68418.m00651 UDP-glucoronosyl/UDP-glucosyl transfera... 31 0.51
At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein ... 30 1.2
At5g25320.1 68418.m03004 ACT domain-containing protein contains ... 29 1.6
At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein ... 29 1.6
At4g24350.1 68417.m03494 phosphorylase family protein contains P... 29 2.1
At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein ... 29 2.1
At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein ... 29 2.7
At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein ... 29 2.7
At3g32030.1 68416.m04070 terpene synthase/cyclase family protein... 29 2.7
At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein ... 29 2.7
At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein ... 29 2.7
At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein ... 29 2.7
At2g43900.1 68415.m05457 endonuclease/exonuclease/phosphatase fa... 28 3.6
At2g43030.1 68415.m05340 ribosomal protein L3 family protein con... 28 3.6
At2g13150.1 68415.m01450 expressed protein contains a bZIP trans... 28 3.6
At1g20020.1 68414.m02507 ferredoxin--NADP(+) reductase, putative... 28 4.8
At5g41220.1 68418.m05009 glutathione S-transferase, putative sim... 27 6.3
At4g31490.1 68417.m04473 coatomer beta subunit, putative / beta-... 27 6.3
At3g45880.1 68416.m04965 hypothetical protein 27 6.3
At1g80630.1 68414.m09462 leucine-rich repeat family protein 27 6.3
At1g62330.1 68414.m07033 expressed protein contains Pfam PF03138... 27 6.3
At1g04680.1 68414.m00465 pectate lyase family protein similar to... 27 6.3
At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein ... 27 8.3
At5g41240.1 68418.m05011 glutathione S-transferase, putative sim... 27 8.3
At5g05880.1 68418.m00647 UDP-glucoronosyl/UDP-glucosyl transfera... 27 8.3
At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein ... 27 8.3
At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase f... 27 8.3
At3g63530.1 68416.m07156 zinc finger (C3HC4-type RING finger) fa... 27 8.3
At1g76990.3 68414.m08966 ACT domain containing protein low simil... 27 8.3
At1g76990.2 68414.m08965 ACT domain containing protein low simil... 27 8.3
At1g76990.1 68414.m08964 ACT domain containing protein low simil... 27 8.3
At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein ... 27 8.3
>At1g57860.1 68414.m06565 60S ribosomal protein L21 similar to 60S
ribosomal protein L21 GI:3885884 from [Oryza sativa]
Length = 164
Score = 181 bits (441), Expect = 2e-46
Identities = 85/158 (53%), Positives = 112/158 (70%)
Frame = +3
Query: 42 MTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGK 221
M G R TRDLFAR FR G IPLSTY++ +KVGD VD++ NGA+ KGMPHK YHG+
Sbjct: 1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60
Query: 222 TGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAK 401
TGR++NVT A+GV VNK++ RII KRI++RVEHV+ S+C ++F R K+N+ L +AK
Sbjct: 61 TGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKQNDVLKADAK 120
Query: 402 AAGKTVNLKRQPAPPKAAHIVSGTEKPVLLAPIPYEFV 515
A G+T++ KRQP PK +V G + PIPY+ V
Sbjct: 121 ARGETISTKRQPKGPKPGFMVEGMTLET-VTPIPYDVV 157
>At1g57660.1 68414.m06543 60S ribosomal protein L21 (RPL21E) similar
to 60S ribosomal protein L21 GB:Q43291 GI:2851508 from
[Arabidopsis thaliana]
Length = 164
Score = 181 bits (441), Expect = 2e-46
Identities = 85/158 (53%), Positives = 112/158 (70%)
Frame = +3
Query: 42 MTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGK 221
M G R TRDLFAR FR G IPLSTY++ +KVGD VD++ NGA+ KGMPHK YHG+
Sbjct: 1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60
Query: 222 TGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAK 401
TGR++NVT A+GV VNK++ RII KRI++RVEHV+ S+C ++F R K+N+ L +AK
Sbjct: 61 TGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKQNDVLKADAK 120
Query: 402 AAGKTVNLKRQPAPPKAAHIVSGTEKPVLLAPIPYEFV 515
A G+T++ KRQP PK +V G + PIPY+ V
Sbjct: 121 ARGETISTKRQPKGPKPGFMVEGMTLET-VTPIPYDVV 157
>At1g09690.1 68414.m01088 60S ribosomal protein L21 (RPL21C) Similar
to ribosomal protein L21 (gb|L38826). ESTs
gb|AA395597,gb|ATTS5197 come from this gene
Length = 164
Score = 180 bits (439), Expect = 4e-46
Identities = 85/158 (53%), Positives = 111/158 (70%)
Frame = +3
Query: 42 MTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGK 221
M G R TRDLFAR FR G IPLSTY++ +KVGD VD++ NGA+ KGMPHK YHG+
Sbjct: 1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60
Query: 222 TGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAK 401
TGR++NVT A+GV VNK++ RII KRI++RVEHV+ S+C ++F R K+N+ L AK
Sbjct: 61 TGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAK 120
Query: 402 AAGKTVNLKRQPAPPKAAHIVSGTEKPVLLAPIPYEFV 515
A G+T++ KRQP PK +V G + PIPY+ V
Sbjct: 121 ANGETISTKRQPKGPKPGFMVEGMTLET-VTPIPYDVV 157
>At1g09590.1 68414.m01076 60S ribosomal protein L21 (RPL21A) Similar
to L21 family of ribosomal protein; amino acid sequence
is identical to F21M12.8
Length = 164
Score = 180 bits (439), Expect = 4e-46
Identities = 85/158 (53%), Positives = 111/158 (70%)
Frame = +3
Query: 42 MTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGK 221
M G R TRDLFAR FR G IPLSTY++ +KVGD VD++ NGA+ KGMPHK YHG+
Sbjct: 1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60
Query: 222 TGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAK 401
TGR++NVT A+GV VNK++ RII KRI++RVEHV+ S+C ++F R K+N+ L AK
Sbjct: 61 TGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAK 120
Query: 402 AAGKTVNLKRQPAPPKAAHIVSGTEKPVLLAPIPYEFV 515
A G+T++ KRQP PK +V G + PIPY+ V
Sbjct: 121 ANGETISTKRQPKGPKPGFMVEGMTLET-VTPIPYDVV 157
>At5g05890.1 68418.m00649 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 455
Score = 31.5 bits (68), Expect = 0.39
Identities = 27/111 (24%), Positives = 42/111 (37%)
Frame = -3
Query: 368 DSLKEVLSALGVLDMLNTDIDALRYNPSANTLVDNHTESMSSHVVHATCLSMVYFVWHTL 189
+ + E L+ G + D L++ L N S V A + + F W +
Sbjct: 320 EEIMEKLNEKGKIVKWAPQQDVLKHRAIGGFLTHNGWSSTVESVCEAVPMICLPFRWDQM 379
Query: 188 LNCTIASDVYNVSNFVHFHVRGERNSSMCAEPASEQVPGAAAVTLGVRHLR 36
LN SDV+ V ++ R ERN A P A+ + HL+
Sbjct: 380 LNARFVSDVWMVG--INLEDRVERNEIEGAIRRLLVEPEGEAIRERIEHLK 428
>At5g05900.1 68418.m00651 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 450
Score = 31.1 bits (67), Expect = 0.51
Identities = 20/65 (30%), Positives = 27/65 (41%)
Frame = -3
Query: 308 DALRYNPSANTLVDNHTESMSSHVVHATCLSMVYFVWHTLLNCTIASDVYNVSNFVHFHV 129
+ L++ L N S V + + FVW LLN SDV+ V +H
Sbjct: 335 EVLKHQAIGGFLTHNGWNSTVESVFEGVPMICMPFVWDQLLNARFVSDVWMVG--LHLEG 392
Query: 128 RGERN 114
R ERN
Sbjct: 393 RIERN 397
>At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 419
Score = 29.9 bits (64), Expect = 1.2
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Frame = +2
Query: 152 RHCRHQRQWCS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQYPC 319
+H H++ C SKGYA QS D + C CDC + SR + HQ C
Sbjct: 141 KHSNHKQWICERCSKGYAVQS----DYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDTC 196
Query: 320 *ACQALQVQTRLP*ESQRE*EATE 391
++ RL + Q AT+
Sbjct: 197 TVRRSQPSNHRLHEQQQHTTNATQ 220
>At5g25320.1 68418.m03004 ACT domain-containing protein contains
Pfam ACT domain PF01842
Length = 500
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Frame = +2
Query: 179 CSSKGYATQSIPWKDRSRVQRDCSCSRCDCQ----QACSRKDYTEAHQ 310
C +GY+ ++ KDR R+ D C+ D Q A R D +A Q
Sbjct: 291 CEERGYSIVTVKSKDRRRLMFDTICTLVDMQYVIFHAALRSDGADAFQ 338
>At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein
similar to potato PCP1 zinc finger protein, GenBank
accession number X82328 contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 402
Score = 29.5 bits (63), Expect = 1.6
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Frame = +2
Query: 167 QRQW-CS--SKGYATQSIPWKDRSRV--QRDCSCSRCDCQQACSRKDYTEAHQYPC 319
+++W C SK YA QS WK +++ RD RCDC SRKD H+ C
Sbjct: 156 EKKWKCEKCSKFYAVQS-DWKAHTKICGTRDY---RCDCGTLFSRKDTFITHRAFC 207
>At4g24350.1 68417.m03494 phosphorylase family protein contains Pfam
PF01048: Phosphorylase family
Length = 336
Score = 29.1 bits (62), Expect = 2.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 167 DVYNVSNFVHFHVRGERNSSM 105
DV+NV VHF + G N+SM
Sbjct: 114 DVFNVKGIVHFGIAGNMNNSM 134
>At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 446
Score = 29.1 bits (62), Expect = 2.1
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +2
Query: 167 QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQYPC 319
+++W C SK YA S WK S++ C RCDC SRKD H+ C
Sbjct: 142 EKKWKCDKCSKKYAVMS-DWKAHSKI---CGTKEYRCDCGTLFSRKDSFITHRAFC 193
>At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 500
Score = 28.7 bits (61), Expect = 2.7
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = +2
Query: 167 QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQYPC 319
+++W C SK YA QS WK S++ C +CDC SR+D H+ C
Sbjct: 134 EKKWKCEKCSKKYAVQS-DWKAHSKI---CGTKEYKCDCGTLFSRRDSFITHRAFC 185
>At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 452
Score = 28.7 bits (61), Expect = 2.7
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = +2
Query: 167 QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQYPC 319
+++W C SK YA QS WK S++ C +CDC SR+D H+ C
Sbjct: 136 EKKWKCDKCSKKYAVQS-DWKAHSKI---CGTKEYKCDCGTLFSRRDSFITHRAFC 187
>At3g32030.1 68416.m04070 terpene synthase/cyclase family protein
contains Pfam profile: PF01397 terpene synthase family
Length = 604
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -3
Query: 371 FDSLKEVLSALGVLDMLNTDIDALRYNPSANTLVDNHTESMSSHVV 234
FDS ++L AL VL +N DI S +V+ M+ H V
Sbjct: 482 FDSKPKILQALSVLYRINNDIVTYEREMSKGEVVNGVNSYMNQHGV 527
>At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 516
Score = 28.7 bits (61), Expect = 2.7
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +2
Query: 167 QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQYPC 319
+++W C SK YA QS WK S+ C RCDC SR+D H+ C
Sbjct: 156 EKKWKCEKCSKRYAVQS-DWKAHSKT---CGTKEYRCDCGTIFSRRDSYITHRAFC 207
>At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 602
Score = 28.7 bits (61), Expect = 2.7
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +2
Query: 167 QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQYPC 319
+++W C SK YA QS WK S+ C RCDC SR+D H+ C
Sbjct: 154 EKKWKCDKCSKRYAVQS-DWKAHSKT---CGTKEYRCDCGTLFSRRDSFITHRAFC 205
>At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein
similar to zinc finger protein ID1 GB:AAC18941
GI:3170601 from [Zea mays] contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 467
Score = 28.7 bits (61), Expect = 2.7
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +2
Query: 167 QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQYPC 319
+++W C SK YA QS WK S+ C RCDC SR+D H+ C
Sbjct: 155 EKKWKCDKCSKRYAVQS-DWKAHSKT---CGTKEYRCDCGTIFSRRDSYITHRAFC 206
>At2g43900.1 68415.m05457 endonuclease/exonuclease/phosphatase family
protein belongs to Pfam:PF03372:
Endonuclease/Exonuclease/phosphatase family; contains 3
WD-40 repeats (PF00400);similar to Type II
inositol-1,4,5-trisphosphate 5-phosphatase EC 3.1.3.56
(5PTASE) (INPP5B) (SP:P32019) [Homo sapiens]
Length = 1305
Score = 28.3 bits (60), Expect = 3.6
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +3
Query: 303 RINIRVEHVKHSKCRQDFLKRVKENERL 386
+ ++++EHV S RQ+F + +K NE++
Sbjct: 920 KFHVKIEHVDRSVRRQEFGRIIKTNEKV 947
>At2g43030.1 68415.m05340 ribosomal protein L3 family protein
contains Pfam profile PF00297: ribosomal protein L3
Length = 271
Score = 28.3 bits (60), Expect = 3.6
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Frame = +3
Query: 135 KVYKVGDIVDIRGNGAVQKGMPH--KVYHGKTGRV-YNVTAH-ALGVIVNKRVRGRIIP- 299
+++K GD+VD+ G + KG K +H K G++ + +H ALG I GR+
Sbjct: 155 EIFKEGDLVDVAGT-TIGKGFQGGIKRHHFKRGQMTHGSKSHRALGSIGAGTTPGRVYKG 213
Query: 300 KRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKR 431
K++ R+ + + +K KE ++ + GK NL R
Sbjct: 214 KKMPGRMGGTRTKIRKLKIVKVDKELNVVMIKGALPGKPGNLLR 257
>At2g13150.1 68415.m01450 expressed protein contains a bZIP
transcription factor basic domain signature (PDOC00036)
Length = 262
Score = 28.3 bits (60), Expect = 3.6
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +1
Query: 322 SMSSTPSADKTSLRESKRMRGY*RKPRLPARPST*RDSQLPLKLPTSSVELRNPS 486
S +STPS ++ + S P L PS+ R + +PL P++SVE R+ S
Sbjct: 4 SDNSTPSRPRSITQPSLAFSSL---PPLSPSPSSSRRNSIPLMNPSASVESRDSS 55
>At1g20020.1 68414.m02507 ferredoxin--NADP(+) reductase, putative /
adrenodoxin reductase, putative strong similarity to
Ferredoxin--NADP reductase, chloroplast precursor (EC
1.18.1.2) (FNR) from {Pisum sativum} SP|P10933,
{Mesembryanthemum crystallinum} SP|P41343, {Spinacia
oleracea} SP|P00455, [Capsicum annuum] GI:6899972
Length = 369
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 141 YKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVN 272
Y+ G V + +G + G PHKV R+Y++ + ALG + N
Sbjct: 125 YREGQSVGVIADGIDKNGKPHKV------RLYSIASSALGDLGN 162
>At5g41220.1 68418.m05009 glutathione S-transferase, putative
similar to emb|CAA10662
Length = 590
Score = 27.5 bits (58), Expect = 6.3
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 101 HTWNYSALHVHESVQSWRHCRHQRQWCS 184
+T NY + E +WR RH ++WCS
Sbjct: 370 YTNNYKSNFTLE--HAWRELRHSKKWCS 395
>At4g31490.1 68417.m04473 coatomer beta subunit, putative /
beta-coat protein, putative / beta-COP, putative similar
to Coatomer beta subunit (Beta-coat protein) (Beta-COP)
from {Rattus norvegicus} SP|P23514, {Mus musculus}
SP|Q9JIF7, {Homo sapiens} SP|P53618; contains Pfam
profile: PF01602 Adaptin N terminal region
Length = 948
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 309 NIRVEHVKHSKCRQDFLKRVKENE-RLLKEAKAAGKTVN 422
N+ ++ + CRQ F+K + E + R ++E KA +T +
Sbjct: 628 NVEMKKIWLESCRQSFVKMISEKQLREMEELKAKTQTTH 666
>At3g45880.1 68416.m04965 hypothetical protein
Length = 431
Score = 27.5 bits (58), Expect = 6.3
Identities = 18/55 (32%), Positives = 24/55 (43%)
Frame = -3
Query: 437 WLSLQVDGLAGSLGFLQ*PLILFDSLKEVLSALGVLDMLNTDIDALRYNPSANTL 273
W +Q D FLQ L SL VLS D ++D + ++ PSA L
Sbjct: 299 WYDMQFDIKYAYFNFLQSLLYKSSSLNPVLSWREDEDSESSDAEGSKFTPSATNL 353
>At1g80630.1 68414.m09462 leucine-rich repeat family protein
Length = 578
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 11 SVKLCNTRLEDDELQGLPPRHQGLVRSQVPHTWNYSALHVHESVQS 148
S++ C T ++D+ L + + +GL+ + N S+ V E VQS
Sbjct: 451 SLRACGTWIDDEALDMISKKCRGLLHLDLQGCLNVSSRGVKEVVQS 496
>At1g62330.1 68414.m07033 expressed protein contains Pfam PF03138:
Plant protein family. The function of this family of
plant proteins is unknown;
Length = 672
Score = 27.5 bits (58), Expect = 6.3
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3
Query: 192 GMPHKVYHGKTGRVYNVTAHALGVIVNK 275
G P K Y+G GR+ AHAL NK
Sbjct: 182 GKPKKTYNGTYGRLLAYAAHALAEGQNK 209
>At1g04680.1 68414.m00465 pectate lyase family protein similar to
pectate lyase GP:14531296 from [Fragaria x ananassa]
Length = 431
Score = 27.5 bits (58), Expect = 6.3
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -3
Query: 218 SMVYFVWHTLLNCTIASDVYNVSNFVHFHVRGERNS-SMCAEPASEQVPGAAAVTLGVRH 42
S +F W T+ +D +S F HV + NS S CA+ + V G+ A+T+ H
Sbjct: 216 SETHFGWRTM------ADGDAISIFGSSHVWIDHNSLSHCADGLVDAVMGSTAITISNNH 269
Query: 41 L 39
L
Sbjct: 270 L 270
>At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 466
Score = 27.1 bits (57), Expect = 8.3
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +2
Query: 167 QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQYPC 319
+++W C +K YA QS WK S+ C RCDC SR+D H+ C
Sbjct: 139 EKKWTCEKCAKRYAVQS-DWKAHSKT---CGTREYRCDCGTIFSRRDSFITHRAFC 190
>At5g41240.1 68418.m05011 glutathione S-transferase, putative
similar to glutathione S-transferase, GST 10b
GB:CAA10662 [Arabidopsis thaliana] 37349.
Length = 591
Score = 27.1 bits (57), Expect = 8.3
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +2
Query: 146 SWRHCRHQRQWCSS 187
+WR RH ++WCS+
Sbjct: 385 AWRELRHNKKWCST 398
>At5g05880.1 68418.m00647 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 451
Score = 27.1 bits (57), Expect = 8.3
Identities = 18/65 (27%), Positives = 26/65 (40%)
Frame = -3
Query: 308 DALRYNPSANTLVDNHTESMSSHVVHATCLSMVYFVWHTLLNCTIASDVYNVSNFVHFHV 129
+ L++ L N S V + + F W LLN SDV+ V +H
Sbjct: 336 EVLKHRAIGGFLTHNGWNSTVESVCEGVPMICLPFRWDQLLNARFVSDVWMVG--IHLEG 393
Query: 128 RGERN 114
R ER+
Sbjct: 394 RIERD 398
>At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 503
Score = 27.1 bits (57), Expect = 8.3
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +2
Query: 167 QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQYPC 319
+++W C SK YA QS WK ++ C +CDC SRKD H+ C
Sbjct: 156 EKKWKCEKCSKKYAVQS-DWKAHAKT---CGTREYKCDCGTLFSRKDSFITHRAFC 207
>At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase
family protein / zinc finger (MYND type) family protein
similar to ubiquitin-specific protease 15 (UBP15)
[Arabidopsis thaliana] GI:11993475; contains Pfam
profiles PF00443: Ubiquitin carboxyl-terminal hydrolase,
PF01753: MYND finger
Length = 631
Score = 27.1 bits (57), Expect = 8.3
Identities = 11/27 (40%), Positives = 13/27 (48%), Gaps = 4/27 (14%)
Frame = +2
Query: 251 CSRCD----CQQACSRKDYTEAHQYPC 319
CSRC C C R D++ HQ C
Sbjct: 72 CSRCKSVRYCSAECQRSDWSSGHQRNC 98
>At3g63530.1 68416.m07156 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 248
Score = 27.1 bits (57), Expect = 8.3
Identities = 19/81 (23%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Frame = +3
Query: 126 TYMKVYKVGDIVDIRGNGAVQK---GMPHKVYHGKTGRVYNVTAHALGVIVNKRVRGRII 296
TY ++ ++G+ V G Q+ +P K Y K G +++ ++ + ++ +I
Sbjct: 151 TYEELVELGEAVGTESRGLSQELIETLPTKKY--KFGSIFSRKRAGERCVICQ-LKYKIG 207
Query: 297 PKRINIRVEHVKHSKCRQDFL 359
+++N+ +HV HS+C +L
Sbjct: 208 ERQMNLPCKHVYHSECISKWL 228
>At1g76990.3 68414.m08966 ACT domain containing protein low
similarity to uridylyltransferase SP|P56884 from
Rhizobium meliloti; contains Pfam ACT domain PF01842
Length = 453
Score = 27.1 bits (57), Expect = 8.3
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 179 CSSKGYATQSIPWKDRSRVQRDCSCSRCDCQ 271
C KGY+ ++ +DR ++ D C+ D Q
Sbjct: 259 CEEKGYSVINVSCEDRPKLMFDIVCTLTDMQ 289
>At1g76990.2 68414.m08965 ACT domain containing protein low
similarity to uridylyltransferase SP|P56884 from
Rhizobium meliloti; contains Pfam ACT domain PF01842
Length = 453
Score = 27.1 bits (57), Expect = 8.3
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 179 CSSKGYATQSIPWKDRSRVQRDCSCSRCDCQ 271
C KGY+ ++ +DR ++ D C+ D Q
Sbjct: 259 CEEKGYSVINVSCEDRPKLMFDIVCTLTDMQ 289
>At1g76990.1 68414.m08964 ACT domain containing protein low
similarity to uridylyltransferase SP|P56884 from
Rhizobium meliloti; contains Pfam ACT domain PF01842
Length = 453
Score = 27.1 bits (57), Expect = 8.3
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 179 CSSKGYATQSIPWKDRSRVQRDCSCSRCDCQ 271
C KGY+ ++ +DR ++ D C+ D Q
Sbjct: 259 CEEKGYSVINVSCEDRPKLMFDIVCTLTDMQ 289
>At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein
contains Zinc finger,C2H2 type,domain contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 506
Score = 27.1 bits (57), Expect = 8.3
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +2
Query: 167 QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQYPC 319
+++W C +K YA QS WK S+ C RCDC SR+D H+ C
Sbjct: 143 EKKWKCEKCAKRYAVQS-DWKAHSKT---CGTREYRCDCGTIFSRRDSFITHRAFC 194
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,009,130
Number of Sequences: 28952
Number of extensions: 249531
Number of successful extensions: 871
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1043173136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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