Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8c24
(382 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00003654E6 Cluster: Ankyrin repeat domain-containing... 34 1.0
UniRef50_A3Q486 Cluster: Transcriptional regulator, TetR family;... 32 3.2
UniRef50_A4R449 Cluster: Putative uncharacterized protein; n=1; ... 32 3.2
UniRef50_Q8F767 Cluster: MFS permease; n=4; Leptospira|Rep: MFS ... 31 5.5
UniRef50_Q6FB37 Cluster: Putative transcriptional regulator; n=1... 31 5.5
UniRef50_UPI000038295C Cluster: hypothetical protein Magn0300173... 31 7.3
UniRef50_A6VU03 Cluster: Phosphonate ABC transporter, periplasmi... 31 7.3
UniRef50_A5I7C9 Cluster: Putative uncharacterized protein; n=4; ... 31 7.3
UniRef50_A2GAQ6 Cluster: DDE superfamily endonuclease containing... 31 7.3
UniRef50_A0EFF6 Cluster: Chromosome undetermined scaffold_93, wh... 31 7.3
UniRef50_UPI0000E4732E Cluster: PREDICTED: similar to MGC83042 p... 31 9.6
UniRef50_UPI0000DD7C16 Cluster: PREDICTED: hypothetical protein;... 31 9.6
>UniRef50_UPI00003654E6 Cluster: Ankyrin repeat domain-containing
protein 13B.; n=1; Takifugu rubripes|Rep: Ankyrin repeat
domain-containing protein 13B. - Takifugu rubripes
Length = 634
Score = 33.9 bits (74), Expect = 1.0
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1
Query: 130 PSCYFSTPPFDTVLYDNIRTVLKDNKTALLSASIQASL 243
PSC F PP TVL R L++++ LL +IQ SL
Sbjct: 506 PSCVFEVPPGYTVLGSKQRDTLREDEEDLLQFAIQQSL 543
>UniRef50_A3Q486 Cluster: Transcriptional regulator, TetR family;
n=1; Mycobacterium sp. JLS|Rep: Transcriptional
regulator, TetR family - Mycobacterium sp. (strain JLS)
Length = 236
Score = 32.3 bits (70), Expect = 3.2
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +1
Query: 148 TPPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDSRHVSSDSF 303
TP TVL+D I VLKD+ TA+LS S+ I R V + S+ +
Sbjct: 155 TPKLSTVLHDAIEPVLKDS-TAVLSGSVTLDEVVDLIVRMAVSHYFMPSNDY 205
>UniRef50_A4R449 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 4052
Score = 32.3 bits (70), Expect = 3.2
Identities = 17/67 (25%), Positives = 33/67 (49%)
Frame = +1
Query: 169 LYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDSRHVSSDSFGVYVKS*SLILHSFG 348
LY + + +T L + ASLPS +++ L+ H++ DSF + + L+ G
Sbjct: 2664 LYHELHHAQFNLETGELVKMVLASLPSGQVHHLLIGYHHINMDSFSMAILMSELLQLYAG 2723
Query: 349 LLVSSRS 369
++ R+
Sbjct: 2724 TVLEPRT 2730
>UniRef50_Q8F767 Cluster: MFS permease; n=4; Leptospira|Rep: MFS
permease - Leptospira interrogans
Length = 434
Score = 31.5 bits (68), Expect = 5.5
Identities = 22/75 (29%), Positives = 34/75 (45%)
Frame = +1
Query: 154 PFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDSRHVSSDSFGVYVKS*SLI 333
PF + + R+ L T LS SIQ ++ ++Y + HV + S S+
Sbjct: 26 PFQALRISDFRSFLFGKFTVTLSISIQTTVVGWQMYHLTGSNLHVGFIGLAEAIPSISMA 85
Query: 334 LHSFGLLVSSRSNKK 378
L S GL++ S KK
Sbjct: 86 LFS-GLVIDSFPRKK 99
>UniRef50_Q6FB37 Cluster: Putative transcriptional regulator; n=1;
Acinetobacter sp. ADP1|Rep: Putative transcriptional
regulator - Acinetobacter sp. (strain ADP1)
Length = 466
Score = 31.5 bits (68), Expect = 5.5
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Frame = +1
Query: 118 YVFDPSCYFSTPPFDTVLYD-----NIRTVLKDNKTALLSASIQASLPSSEIYRQLVDSR 282
Y D C F P DTVL D N R +LK ++ ++S P E ++Q +
Sbjct: 175 YSIDLICRFLLKPGDTVLLDDPCYFNFRALLKVHQVKVISVRYTPDGPDIEAFKQAIIEH 234
Query: 283 H 285
H
Sbjct: 235 H 235
>UniRef50_UPI000038295C Cluster: hypothetical protein Magn03001734;
n=1; Magnetospirillum magnetotacticum MS-1|Rep:
hypothetical protein Magn03001734 - Magnetospirillum
magnetotacticum MS-1
Length = 101
Score = 31.1 bits (67), Expect = 7.3
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -2
Query: 321 RFYVDSKGVGRNMARIYQLAVDLGGRERSLNRCREKS 211
R + KG+GR ++R Q+A DLG R L R ++++
Sbjct: 16 RLWRSVKGLGRELSRASQVAGDLGARADELARAQQEA 52
>UniRef50_A6VU03 Cluster: Phosphonate ABC transporter, periplasmic
phosphonate-binding protein precursor; n=23;
Proteobacteria|Rep: Phosphonate ABC transporter,
periplasmic phosphonate-binding protein precursor -
Marinomonas sp. MWYL1
Length = 347
Score = 31.1 bits (67), Expect = 7.3
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +1
Query: 214 LLSASIQASLPSSEIYRQLVDSRHVSSDSFGVYVKS*SLILHSFG 348
+LS A+ +S++++++VD++ VS D F + S SFG
Sbjct: 214 VLSGDYDAAPVASDVFKRMVDAKRVSKDDFRIIYTSPRFPTSSFG 258
>UniRef50_A5I7C9 Cluster: Putative uncharacterized protein; n=4;
Clostridium botulinum|Rep: Putative uncharacterized
protein - Clostridium botulinum A str. ATCC 3502
Length = 219
Score = 31.1 bits (67), Expect = 7.3
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 16 NQAIIDYKVKIADNNLVTHKELALKVSSIIGTRVYVFDPSCYF 144
N IIDY+ I DNN + V S++G Y+F P+ +F
Sbjct: 39 NTTIIDYEKNIFDNNWAVYP----NVESLLGFVKYIFIPTVFF 77
>UniRef50_A2GAQ6 Cluster: DDE superfamily endonuclease containing
protein; n=1; Trichomonas vaginalis G3|Rep: DDE
superfamily endonuclease containing protein -
Trichomonas vaginalis G3
Length = 398
Score = 31.1 bits (67), Expect = 7.3
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +1
Query: 46 IADNNLVTHKELALKVSSIIGTRVYVFDPSCYFSTPPFDTVLYDNIR 186
I D N+ LAL + + VY+F C PFD L N+R
Sbjct: 315 ILDGNMSRECPLALSILRLHRVHVYIFPSHCTHVYQPFDIGLAGNVR 361
>UniRef50_A0EFF6 Cluster: Chromosome undetermined scaffold_93, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_93,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 184
Score = 31.1 bits (67), Expect = 7.3
Identities = 24/87 (27%), Positives = 43/87 (49%)
Frame = +1
Query: 115 VYVFDPSCYFSTPPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDSRHVSS 294
+Y C FS +D + Y N+R+ ++ A+L +I+ SL S+ Q++DS +
Sbjct: 21 IYSTQQKCRFSRNEYDFLYYINLRSKVQQILEAILK-NIKTSLKMSQ--NQILDSDSILG 77
Query: 295 DSFGVYVKS*SLILHSFGLLVSSRSNK 375
S Y K L++ F L + ++ K
Sbjct: 78 -STNSYDKCFYLLVQEFALKLLEKTVK 103
>UniRef50_UPI0000E4732E Cluster: PREDICTED: similar to MGC83042
protein; n=3; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to MGC83042 protein -
Strongylocentrotus purpuratus
Length = 719
Score = 30.7 bits (66), Expect = 9.6
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -1
Query: 376 FC*SAMKLTTQNCEE*GIKILRRLQRSRKKHGENLPTGGRSRRK 245
FC M TT C+E +K L R +R +K+ + P+G + + K
Sbjct: 281 FCCMVMS-TTSRCQESSLKRLERKERKQKRDLKKNPSGSKKKDK 323
>UniRef50_UPI0000DD7C16 Cluster: PREDICTED: hypothetical protein;
n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 223
Score = 30.7 bits (66), Expect = 9.6
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 110 PESTSSIPPATFQLLPSIPYCTTTS 184
P S+ PP +F L+PS+P C+ TS
Sbjct: 75 PLRPSACPPLSFSLVPSLPPCSPTS 99
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 351,363,053
Number of Sequences: 1657284
Number of extensions: 6136520
Number of successful extensions: 17301
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17298
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14868845845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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