Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8c12
         (654 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    26   0.90 
DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfat...    25   2.1  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    25   2.8  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   6.4  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   6.4  
CR954257-5|CAJ14156.1|  227|Anopheles gambiae predicted protein ...    23   8.4  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   8.4  

>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 26.2 bits (55), Expect = 0.90
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -1

Query: 291 RPSQSHRSLGYQRHHFDPRALPQQ 220
           +P + HR L Y RH  D R L  Q
Sbjct: 806 KPYRRHRRLSYSRHAVDDRDLSTQ 829


>DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfatase
           precursor protein.
          Length = 525

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = +3

Query: 549 DYFNYGFNEVTWSAYCERQRRMRINETGVGMHMG 650
           DY  YG   V WS+Y + + R    +  V    G
Sbjct: 248 DYPPYGLPTVAWSSYLDVRNRDDFRQLNVSFPFG 281


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
 Frame = +3

Query: 372 GLVASAGGPEKPRSVTTTS---GKVTLEDLEGPGSINGVP 482
           GL +S G      S  T     GK  L  L  PGS+ GVP
Sbjct: 297 GLGSSLGSAHHGGSAGTLGSLVGKYDLSALSPPGSLGGVP 336


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 231  LPQQNAHHLIPNRYYLPLHLDFLRQH 154
            + Q+N H +    YYLP   D L ++
Sbjct: 2091 IQQENGHRITEEEYYLPDEDDELGEY 2116


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 48  DENDDNWLYGDSG 86
           + ND NW Y +SG
Sbjct: 322 NSNDTNWFYSESG 334


>CR954257-5|CAJ14156.1|  227|Anopheles gambiae predicted protein
           protein.
          Length = 227

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 7/61 (11%)
 Frame = -3

Query: 493 NSKAGTPLILPGPSKSSNVTFP------LVVVTERGF-SGPPADATKPTPLFMFRLAYCD 335
           N++  TP+ +PG   ++ + +P       V     G+   PP D+  P    +F+  +C 
Sbjct: 52  NARNRTPVYIPGKCSTNEILYPGDHDNDWVCDCRPGYVYSPPQDSCYP----LFQQGFCQ 107

Query: 334 P 332
           P
Sbjct: 108 P 108


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +3

Query: 441 LEDLEGPGSINGVPALEFNIDTIEDK 518
           L  L GP  +NG+P ++ ++  + +K
Sbjct: 513 LPGLPGPAGLNGLPGMKGDMGPLGEK 538


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 624,497
Number of Sequences: 2352
Number of extensions: 11536
Number of successful extensions: 33
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)