Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8c12
(654 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC110383-1|AAI10384.1| 594|Homo sapiens FIP1 like 1 (S. cerevis... 124 2e-28
BC052959-1|AAH52959.1| 559|Homo sapiens FIP1L1 protein protein. 124 2e-28
BC024016-1|AAH24016.1| 559|Homo sapiens FIP1L1 protein protein. 124 2e-28
BC017724-1|AAH17724.1| 378|Homo sapiens FIP1L1 protein protein. 124 2e-28
AY366510-1|AAQ88277.1| 594|Homo sapiens pre-mRNA 3'end processi... 124 2e-28
AY229892-1|AAP69563.1| 849|Homo sapiens FIP1L1/PDGFRA fusion pr... 124 2e-28
AY533563-1|AAS45544.1| 2663|Homo sapiens ankyrin repeat-containi... 30 6.3
AY373756-1|AAR25661.1| 2664|Homo sapiens ankyrin repeat-containi... 30 6.3
AY131227-1|AAN07913.1| 611|Homo sapiens medulloblastoma antigen... 30 6.3
AL358780-2|CAI13978.2| 818|Homo sapiens novel protein (FLJ16611... 30 8.3
AK131456-1|BAD18601.1| 762|Homo sapiens protein ( Homo sapiens ... 30 8.3
AB234866-1|BAE93016.1| 827|Homo sapiens DLN-1 protein. 30 8.3
>BC110383-1|AAI10384.1| 594|Homo sapiens FIP1 like 1 (S.
cerevisiae) protein.
Length = 594
Score = 124 bits (300), Expect = 2e-28
Identities = 67/133 (50%), Positives = 85/133 (63%), Gaps = 1/133 (0%)
Frame = +3
Query: 225 EVTREDQNGDADSQENGXXXXXXXXXVKVTIGEIKSGS-QYASLNIKRGVGLVASAGGPE 401
+VT + + D+DS ++ V VTIG+IK+G+ QY S V L GG
Sbjct: 77 KVTETEDDSDSDSDDD-------EDDVHVTIGDIKTGAPQYGSYGTAP-VNLNIKTGG-- 126
Query: 402 KPRSVTTTSGKVTLEDLEGPGSINGVPALEFNIDTIEDKPWNKPGADISDYFNYGFNEVT 581
R TT KV DL+ PGSINGVP LE ++D+ EDKPW KPGAD+SDYFNYGFNE T
Sbjct: 127 --RVYGTTGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDT 184
Query: 582 WSAYCERQRRMRI 620
W AYCE+Q+R+R+
Sbjct: 185 WKAYCEKQKRIRM 197
>BC052959-1|AAH52959.1| 559|Homo sapiens FIP1L1 protein protein.
Length = 559
Score = 124 bits (300), Expect = 2e-28
Identities = 67/133 (50%), Positives = 85/133 (63%), Gaps = 1/133 (0%)
Frame = +3
Query: 225 EVTREDQNGDADSQENGXXXXXXXXXVKVTIGEIKSGS-QYASLNIKRGVGLVASAGGPE 401
+VT + + D+DS ++ V VTIG+IK+G+ QY S V L GG
Sbjct: 65 KVTETEDDSDSDSDDD-------EDDVHVTIGDIKTGAPQYGSYGTAP-VNLNIKTGG-- 114
Query: 402 KPRSVTTTSGKVTLEDLEGPGSINGVPALEFNIDTIEDKPWNKPGADISDYFNYGFNEVT 581
R TT KV DL+ PGSINGVP LE ++D+ EDKPW KPGAD+SDYFNYGFNE T
Sbjct: 115 --RVYGTTGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDT 172
Query: 582 WSAYCERQRRMRI 620
W AYCE+Q+R+R+
Sbjct: 173 WKAYCEKQKRIRM 185
>BC024016-1|AAH24016.1| 559|Homo sapiens FIP1L1 protein protein.
Length = 559
Score = 124 bits (300), Expect = 2e-28
Identities = 67/133 (50%), Positives = 85/133 (63%), Gaps = 1/133 (0%)
Frame = +3
Query: 225 EVTREDQNGDADSQENGXXXXXXXXXVKVTIGEIKSGS-QYASLNIKRGVGLVASAGGPE 401
+VT + + D+DS ++ V VTIG+IK+G+ QY S V L GG
Sbjct: 65 KVTETEDDSDSDSDDD-------EDDVHVTIGDIKTGAPQYGSYGTAP-VNLNIKTGG-- 114
Query: 402 KPRSVTTTSGKVTLEDLEGPGSINGVPALEFNIDTIEDKPWNKPGADISDYFNYGFNEVT 581
R TT KV DL+ PGSINGVP LE ++D+ EDKPW KPGAD+SDYFNYGFNE T
Sbjct: 115 --RVYGTTGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDT 172
Query: 582 WSAYCERQRRMRI 620
W AYCE+Q+R+R+
Sbjct: 173 WKAYCEKQKRIRM 185
>BC017724-1|AAH17724.1| 378|Homo sapiens FIP1L1 protein protein.
Length = 378
Score = 124 bits (300), Expect = 2e-28
Identities = 67/133 (50%), Positives = 85/133 (63%), Gaps = 1/133 (0%)
Frame = +3
Query: 225 EVTREDQNGDADSQENGXXXXXXXXXVKVTIGEIKSGS-QYASLNIKRGVGLVASAGGPE 401
+VT + + D+DS ++ V VTIG+IK+G+ QY S V L GG
Sbjct: 62 KVTETEDDSDSDSDDD-------EDDVHVTIGDIKTGAPQYGSYGTAP-VNLNIKTGG-- 111
Query: 402 KPRSVTTTSGKVTLEDLEGPGSINGVPALEFNIDTIEDKPWNKPGADISDYFNYGFNEVT 581
R TT KV DL+ PGSINGVP LE ++D+ EDKPW KPGAD+SDYFNYGFNE T
Sbjct: 112 --RVYGTTGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDT 169
Query: 582 WSAYCERQRRMRI 620
W AYCE+Q+R+R+
Sbjct: 170 WKAYCEKQKRIRM 182
>AY366510-1|AAQ88277.1| 594|Homo sapiens pre-mRNA 3'end processing
factor FIP1 protein.
Length = 594
Score = 124 bits (300), Expect = 2e-28
Identities = 67/133 (50%), Positives = 85/133 (63%), Gaps = 1/133 (0%)
Frame = +3
Query: 225 EVTREDQNGDADSQENGXXXXXXXXXVKVTIGEIKSGS-QYASLNIKRGVGLVASAGGPE 401
+VT + + D+DS ++ V VTIG+IK+G+ QY S V L GG
Sbjct: 77 KVTETEDDSDSDSDDD-------EDDVHVTIGDIKTGAPQYGSYGTAP-VNLNIKTGG-- 126
Query: 402 KPRSVTTTSGKVTLEDLEGPGSINGVPALEFNIDTIEDKPWNKPGADISDYFNYGFNEVT 581
R TT KV DL+ PGSINGVP LE ++D+ EDKPW KPGAD+SDYFNYGFNE T
Sbjct: 127 --RVYGTTGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDT 184
Query: 582 WSAYCERQRRMRI 620
W AYCE+Q+R+R+
Sbjct: 185 WKAYCEKQKRIRM 197
>AY229892-1|AAP69563.1| 849|Homo sapiens FIP1L1/PDGFRA fusion
protein protein.
Length = 849
Score = 124 bits (300), Expect = 2e-28
Identities = 67/133 (50%), Positives = 85/133 (63%), Gaps = 1/133 (0%)
Frame = +3
Query: 225 EVTREDQNGDADSQENGXXXXXXXXXVKVTIGEIKSGS-QYASLNIKRGVGLVASAGGPE 401
+VT + + D+DS ++ V VTIG+IK+G+ QY S V L GG
Sbjct: 77 KVTETEDDSDSDSDDD-------EDDVHVTIGDIKTGAPQYGSYGTAP-VNLNIKTGG-- 126
Query: 402 KPRSVTTTSGKVTLEDLEGPGSINGVPALEFNIDTIEDKPWNKPGADISDYFNYGFNEVT 581
R TT KV DL+ PGSINGVP LE ++D+ EDKPW KPGAD+SDYFNYGFNE T
Sbjct: 127 --RVYGTTGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDT 184
Query: 582 WSAYCERQRRMRI 620
W AYCE+Q+R+R+
Sbjct: 185 WKAYCEKQKRIRM 197
>AY533563-1|AAS45544.1| 2663|Homo sapiens ankyrin repeat-containing
cofactor-1 protein.
Length = 2663
Score = 30.3 bits (65), Expect = 6.3
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = +2
Query: 302 RQSHHWRDQVWVTICQPKHKKGSWLGSICRGT*ETSFSNYNKWKSDIRGLGRARK 466
+ + HWR W TI P + S L R T TS S+Y+ S + L RK
Sbjct: 541 QHTKHWRTDNWKTISSPAWSEVSSLSDSTR-TRLTSESDYSSEGSSVESLKPVRK 594
>AY373756-1|AAR25661.1| 2664|Homo sapiens ankyrin repeat-containing
protein protein.
Length = 2664
Score = 30.3 bits (65), Expect = 6.3
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = +2
Query: 302 RQSHHWRDQVWVTICQPKHKKGSWLGSICRGT*ETSFSNYNKWKSDIRGLGRARK 466
+ + HWR W TI P + S L R T TS S+Y+ S + L RK
Sbjct: 542 QHTKHWRTDNWKTISSPAWSEVSSLSDSTR-TRLTSESDYSSEGSSVESLKPVRK 595
>AY131227-1|AAN07913.1| 611|Homo sapiens medulloblastoma antigen
MU-MB-20.240 protein.
Length = 611
Score = 30.3 bits (65), Expect = 6.3
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = +2
Query: 302 RQSHHWRDQVWVTICQPKHKKGSWLGSICRGT*ETSFSNYNKWKSDIRGLGRARK 466
+ + HWR W TI P + S L R T TS S+Y+ S + L RK
Sbjct: 160 QHTKHWRTDNWKTISSPAWSEVSSLSDSTR-TRLTSESDYSSEGSSVESLKPVRK 213
>AL358780-2|CAI13978.2| 818|Homo sapiens novel protein (FLJ16611)
protein.
Length = 818
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -1
Query: 294 CRPSQSHRSLGYQRHHFDPRALPQQNAHHLIPNRYYLP 181
C P H + HH RA P Q +HH P ++ P
Sbjct: 243 CPPPHHHHHHHHHHHHHHHRAQPPQQSHH--PPHHHRP 278
>AK131456-1|BAD18601.1| 762|Homo sapiens protein ( Homo sapiens
cDNA FLJ16611 fis, clone TESTI4011829. ).
Length = 762
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -1
Query: 294 CRPSQSHRSLGYQRHHFDPRALPQQNAHHLIPNRYYLP 181
C P H + HH RA P Q +HH P ++ P
Sbjct: 243 CPPPHHHHHHHHHHHHHHHRAQPPQQSHH--PPHHHRP 278
>AB234866-1|BAE93016.1| 827|Homo sapiens DLN-1 protein.
Length = 827
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -1
Query: 294 CRPSQSHRSLGYQRHHFDPRALPQQNAHHLIPNRYYLP 181
C P H + HH RA P Q +HH P ++ P
Sbjct: 252 CPPPHHHHHHHHHHHHHHHRAQPPQQSHH--PPHHHRP 287
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,489,671
Number of Sequences: 237096
Number of extensions: 1908591
Number of successful extensions: 9371
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 8972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9360
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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